Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18530 and CA264_18535 are separated by 642 nucleotides CA264_18535 and CA264_18540 are separated by 325 nucleotides
CA264_18530: CA264_18530 - MarR family transcriptional regulator, at 4,309,978 to 4,310,463
_18530
CA264_18535: CA264_18535 - TonB dependent receptor, at 4,311,106 to 4,313,583
_18535
CA264_18540: CA264_18540 - RNA methyltransferase, at 4,313,909 to 4,314,448
_18540
Position (kb)
4311
4312
4313
4314 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4310.153 kb on - strand, within CA264_18530 at 4310.301 kb on - strand, within CA264_18530 at 4310.333 kb on + strand, within CA264_18530 at 4310.336 kb on - strand, within CA264_18530 at 4310.436 kb on + strand at 4310.439 kb on + strand at 4310.439 kb on + strand at 4310.439 kb on + strand at 4310.440 kb on - strand at 4310.440 kb on - strand at 4310.457 kb on - strand at 4310.457 kb on - strand at 4310.461 kb on + strand at 4310.464 kb on + strand at 4310.589 kb on + strand at 4310.590 kb on - strand at 4310.594 kb on + strand at 4310.615 kb on - strand at 4310.617 kb on + strand at 4310.655 kb on + strand at 4310.658 kb on + strand at 4310.658 kb on + strand at 4310.659 kb on - strand at 4310.757 kb on + strand at 4310.758 kb on - strand at 4310.980 kb on - strand at 4310.980 kb on - strand at 4311.009 kb on + strand at 4311.009 kb on + strand at 4311.013 kb on + strand at 4311.044 kb on - strand at 4311.268 kb on + strand at 4311.268 kb on + strand at 4311.269 kb on - strand at 4311.269 kb on - strand at 4311.273 kb on - strand at 4311.273 kb on - strand at 4311.291 kb on + strand at 4311.371 kb on - strand, within CA264_18535 at 4311.371 kb on - strand, within CA264_18535 at 4311.413 kb on + strand, within CA264_18535 at 4311.416 kb on + strand, within CA264_18535 at 4311.417 kb on - strand, within CA264_18535 at 4311.459 kb on + strand, within CA264_18535 at 4311.459 kb on + strand, within CA264_18535 at 4311.460 kb on - strand, within CA264_18535 at 4311.656 kb on + strand, within CA264_18535 at 4311.656 kb on + strand, within CA264_18535 at 4311.704 kb on - strand, within CA264_18535 at 4311.761 kb on + strand, within CA264_18535 at 4311.770 kb on + strand, within CA264_18535 at 4311.867 kb on - strand, within CA264_18535 at 4311.882 kb on + strand, within CA264_18535 at 4311.886 kb on - strand, within CA264_18535 at 4311.911 kb on - strand, within CA264_18535 at 4311.947 kb on - strand, within CA264_18535 at 4311.964 kb on - strand, within CA264_18535 at 4311.968 kb on + strand, within CA264_18535 at 4311.969 kb on - strand, within CA264_18535 at 4311.981 kb on - strand, within CA264_18535 at 4311.981 kb on - strand, within CA264_18535 at 4312.059 kb on + strand, within CA264_18535 at 4312.062 kb on - strand, within CA264_18535 at 4312.062 kb on - strand, within CA264_18535 at 4312.073 kb on + strand, within CA264_18535 at 4312.135 kb on - strand, within CA264_18535 at 4312.243 kb on - strand, within CA264_18535 at 4312.243 kb on - strand, within CA264_18535 at 4312.325 kb on + strand, within CA264_18535 at 4312.359 kb on - strand, within CA264_18535 at 4312.359 kb on - strand, within CA264_18535 at 4312.443 kb on + strand, within CA264_18535 at 4312.770 kb on - strand, within CA264_18535 at 4312.770 kb on - strand, within CA264_18535 at 4312.932 kb on - strand, within CA264_18535 at 4312.969 kb on + strand, within CA264_18535 at 4312.970 kb on - strand, within CA264_18535 at 4313.042 kb on - strand, within CA264_18535 at 4313.042 kb on - strand, within CA264_18535 at 4313.140 kb on + strand, within CA264_18535 at 4313.155 kb on - strand, within CA264_18535 at 4313.180 kb on + strand, within CA264_18535 at 4313.180 kb on + strand, within CA264_18535 at 4313.303 kb on + strand, within CA264_18535 at 4313.303 kb on + strand, within CA264_18535 at 4313.303 kb on + strand, within CA264_18535 at 4313.304 kb on - strand, within CA264_18535 at 4313.342 kb on + strand at 4313.343 kb on - strand at 4313.343 kb on - strand at 4313.551 kb on + strand at 4313.551 kb on + strand at 4313.552 kb on - strand at 4313.552 kb on - strand at 4313.553 kb on + strand at 4313.553 kb on + strand at 4313.553 kb on + strand at 4313.554 kb on - strand at 4313.554 kb on - strand at 4313.557 kb on + strand at 4313.557 kb on + strand at 4313.558 kb on - strand at 4313.558 kb on - strand at 4313.590 kb on + strand at 4313.618 kb on - strand at 4313.622 kb on + strand at 4313.622 kb on + strand at 4313.720 kb on + strand at 4313.737 kb on - strand at 4313.737 kb on - strand at 4313.737 kb on - strand at 4313.741 kb on - strand at 4313.741 kb on - strand at 4313.741 kb on - strand at 4313.741 kb on - strand at 4313.742 kb on + strand at 4313.743 kb on - strand at 4313.743 kb on - strand at 4313.769 kb on - strand at 4313.974 kb on + strand, within CA264_18540 at 4314.082 kb on - strand, within CA264_18540 at 4314.121 kb on + strand, within CA264_18540 at 4314.122 kb on - strand, within CA264_18540 at 4314.122 kb on - strand, within CA264_18540 at 4314.251 kb on - strand, within CA264_18540 at 4314.432 kb on - strand at 4314.474 kb on - strand at 4314.474 kb on - strand at 4314.550 kb on - strand at 4314.568 kb on + strand at 4314.570 kb on + strand at 4314.571 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 4,310,153 - CA264_18530 0.36 -3.7 4,310,301 - CA264_18530 0.66 -0.0 4,310,333 + CA264_18530 0.73 -0.8 4,310,336 - CA264_18530 0.74 +0.1 4,310,436 + -0.7 4,310,439 + +0.2 4,310,439 + +0.1 4,310,439 + +3.0 4,310,440 - -2.4 4,310,440 - -0.4 4,310,457 - +0.7 4,310,457 - -0.5 4,310,461 + -0.9 4,310,464 + +1.3 4,310,589 + -0.5 4,310,590 - -1.5 4,310,594 + +0.8 4,310,615 - -0.2 4,310,617 + -0.2 4,310,655 + -1.2 4,310,658 + -0.8 4,310,658 + -0.5 4,310,659 - +1.0 4,310,757 + -1.7 4,310,758 - +0.6 4,310,980 - -1.0 4,310,980 - +0.3 4,311,009 + -0.5 4,311,009 + -1.3 4,311,013 + -1.6 4,311,044 - +3.2 4,311,268 + -0.1 4,311,268 + -0.9 4,311,269 - -0.5 4,311,269 - -0.1 4,311,273 - -1.1 4,311,273 - -0.8 4,311,291 + +0.4 4,311,371 - CA264_18535 0.11 -1.3 4,311,371 - CA264_18535 0.11 -0.5 4,311,413 + CA264_18535 0.12 -0.8 4,311,416 + CA264_18535 0.13 -1.1 4,311,417 - CA264_18535 0.13 -0.7 4,311,459 + CA264_18535 0.14 -0.3 4,311,459 + CA264_18535 0.14 -1.2 4,311,460 - CA264_18535 0.14 +1.7 4,311,656 + CA264_18535 0.22 -0.1 4,311,656 + CA264_18535 0.22 -3.3 4,311,704 - CA264_18535 0.24 +0.9 4,311,761 + CA264_18535 0.26 +0.0 4,311,770 + CA264_18535 0.27 -0.6 4,311,867 - CA264_18535 0.31 +0.4 4,311,882 + CA264_18535 0.31 -0.7 4,311,886 - CA264_18535 0.31 -0.0 4,311,911 - CA264_18535 0.32 +0.1 4,311,947 - CA264_18535 0.34 -0.5 4,311,964 - CA264_18535 0.35 +0.8 4,311,968 + CA264_18535 0.35 -0.9 4,311,969 - CA264_18535 0.35 -0.4 4,311,981 - CA264_18535 0.35 +1.8 4,311,981 - CA264_18535 0.35 -0.3 4,312,059 + CA264_18535 0.38 -0.2 4,312,062 - CA264_18535 0.39 -0.3 4,312,062 - CA264_18535 0.39 -0.9 4,312,073 + CA264_18535 0.39 +0.5 4,312,135 - CA264_18535 0.42 -1.1 4,312,243 - CA264_18535 0.46 +0.0 4,312,243 - CA264_18535 0.46 -0.0 4,312,325 + CA264_18535 0.49 -0.2 4,312,359 - CA264_18535 0.51 -0.4 4,312,359 - CA264_18535 0.51 -0.0 4,312,443 + CA264_18535 0.54 -0.6 4,312,770 - CA264_18535 0.67 +0.1 4,312,770 - CA264_18535 0.67 -0.9 4,312,932 - CA264_18535 0.74 +0.5 4,312,969 + CA264_18535 0.75 +0.3 4,312,970 - CA264_18535 0.75 -0.2 4,313,042 - CA264_18535 0.78 -0.1 4,313,042 - CA264_18535 0.78 -0.9 4,313,140 + CA264_18535 0.82 +0.2 4,313,155 - CA264_18535 0.83 -0.2 4,313,180 + CA264_18535 0.84 -1.4 4,313,180 + CA264_18535 0.84 -0.2 4,313,303 + CA264_18535 0.89 -0.6 4,313,303 + CA264_18535 0.89 +0.3 4,313,303 + CA264_18535 0.89 -1.4 4,313,304 - CA264_18535 0.89 -0.2 4,313,342 + -0.8 4,313,343 - -0.6 4,313,343 - -0.9 4,313,551 + -0.6 4,313,551 + -1.4 4,313,552 - -0.1 4,313,552 - -0.2 4,313,553 + -2.2 4,313,553 + -1.1 4,313,553 + -1.2 4,313,554 - -0.5 4,313,554 - +1.9 4,313,557 + -0.1 4,313,557 + -1.3 4,313,558 - -0.3 4,313,558 - +0.3 4,313,590 + +0.0 4,313,618 - -0.1 4,313,622 + +1.3 4,313,622 + -1.3 4,313,720 + -0.3 4,313,737 - -1.0 4,313,737 - +0.5 4,313,737 - -0.1 4,313,741 - -0.4 4,313,741 - -0.8 4,313,741 - +0.1 4,313,741 - -0.7 4,313,742 + -1.3 4,313,743 - +1.0 4,313,743 - -0.4 4,313,769 - +1.5 4,313,974 + CA264_18540 0.12 -1.5 4,314,082 - CA264_18540 0.32 -0.9 4,314,121 + CA264_18540 0.39 -1.3 4,314,122 - CA264_18540 0.39 -0.1 4,314,122 - CA264_18540 0.39 -0.2 4,314,251 - CA264_18540 0.63 -1.7 4,314,432 - -2.4 4,314,474 - +0.5 4,314,474 - -1.0 4,314,550 - -0.4 4,314,568 + -0.0 4,314,570 + -3.4 4,314,571 - -0.8
Or see this region's nucleotide sequence