Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_17695

Experiment: m.b. Chloride 750 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_17690 and CA264_17695 are separated by 512 nucleotidesCA264_17695 and CA264_17700 are separated by 221 nucleotides CA264_17690: CA264_17690 - hypothetical protein, at 4,115,711 to 4,117,660 _17690 CA264_17695: CA264_17695 - phosphoribosylformylglycinamidine cyclo-ligase, at 4,118,173 to 4,119,342 _17695 CA264_17700: CA264_17700 - hypothetical protein, at 4,119,564 to 4,120,304 _17700 Position (kb) 4118 4119 4120Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 4117.266 kb on + strand, within CA264_17690at 4117.469 kb on + strandat 4117.648 kb on + strandat 4117.649 kb on - strandat 4117.650 kb on + strandat 4117.651 kb on - strandat 4117.658 kb on + strandat 4117.668 kb on - strandat 4117.692 kb on + strandat 4117.696 kb on + strandat 4117.697 kb on - strandat 4117.697 kb on - strandat 4117.698 kb on + strandat 4117.699 kb on - strandat 4117.744 kb on - strandat 4117.744 kb on - strandat 4117.944 kb on + strandat 4117.944 kb on + strandat 4117.944 kb on + strandat 4117.945 kb on - strandat 4118.061 kb on - strandat 4118.061 kb on - strandat 4118.107 kb on - strandat 4118.172 kb on + strandat 4118.255 kb on + strandat 4118.256 kb on - strandat 4118.312 kb on - strand, within CA264_17695at 4118.323 kb on - strand, within CA264_17695at 4118.363 kb on - strand, within CA264_17695at 4118.369 kb on - strand, within CA264_17695at 4118.467 kb on - strand, within CA264_17695at 4118.590 kb on + strand, within CA264_17695at 4118.684 kb on + strand, within CA264_17695at 4118.698 kb on - strand, within CA264_17695at 4118.752 kb on + strand, within CA264_17695at 4118.793 kb on + strand, within CA264_17695at 4118.794 kb on - strand, within CA264_17695at 4118.820 kb on + strand, within CA264_17695at 4118.824 kb on + strand, within CA264_17695at 4118.825 kb on - strand, within CA264_17695at 4118.825 kb on - strand, within CA264_17695at 4118.851 kb on + strand, within CA264_17695at 4118.851 kb on + strand, within CA264_17695at 4118.852 kb on - strand, within CA264_17695at 4118.852 kb on - strand, within CA264_17695at 4118.852 kb on - strand, within CA264_17695at 4118.852 kb on - strand, within CA264_17695at 4118.852 kb on - strand, within CA264_17695at 4118.879 kb on + strand, within CA264_17695at 4118.880 kb on - strand, within CA264_17695at 4118.881 kb on + strand, within CA264_17695at 4118.909 kb on + strand, within CA264_17695at 4118.933 kb on + strand, within CA264_17695at 4118.937 kb on + strand, within CA264_17695at 4118.938 kb on - strand, within CA264_17695at 4118.966 kb on - strand, within CA264_17695at 4118.988 kb on - strand, within CA264_17695at 4119.012 kb on - strand, within CA264_17695at 4119.084 kb on - strand, within CA264_17695at 4119.124 kb on - strand, within CA264_17695at 4119.161 kb on - strand, within CA264_17695at 4119.171 kb on + strand, within CA264_17695at 4119.171 kb on + strand, within CA264_17695at 4119.232 kb on - strandat 4119.332 kb on - strandat 4119.350 kb on - strandat 4119.351 kb on + strandat 4119.352 kb on - strandat 4119.352 kb on - strandat 4119.434 kb on + strandat 4119.463 kb on + strandat 4119.464 kb on - strandat 4119.559 kb on + strandat 4119.582 kb on + strandat 4119.582 kb on + strandat 4119.620 kb on - strandat 4119.717 kb on - strand, within CA264_17700at 4119.733 kb on + strand, within CA264_17700at 4119.733 kb on + strand, within CA264_17700at 4119.733 kb on + strand, within CA264_17700at 4119.733 kb on + strand, within CA264_17700at 4119.759 kb on + strand, within CA264_17700at 4119.760 kb on - strand, within CA264_17700at 4119.788 kb on - strand, within CA264_17700at 4119.830 kb on + strand, within CA264_17700at 4119.831 kb on - strand, within CA264_17700at 4119.870 kb on + strand, within CA264_17700at 4119.899 kb on + strand, within CA264_17700at 4119.900 kb on - strand, within CA264_17700at 4119.900 kb on - strand, within CA264_17700at 4119.900 kb on - strand, within CA264_17700at 4119.900 kb on - strand, within CA264_17700at 4119.903 kb on + strand, within CA264_17700at 4119.904 kb on - strand, within CA264_17700at 4119.907 kb on - strand, within CA264_17700at 4119.909 kb on - strand, within CA264_17700at 4119.967 kb on + strand, within CA264_17700at 4120.043 kb on + strand, within CA264_17700at 4120.044 kb on - strand, within CA264_17700at 4120.044 kb on - strand, within CA264_17700at 4120.045 kb on + strand, within CA264_17700at 4120.049 kb on - strand, within CA264_17700at 4120.049 kb on - strand, within CA264_17700at 4120.101 kb on - strand, within CA264_17700at 4120.105 kb on - strand, within CA264_17700at 4120.134 kb on - strand, within CA264_17700at 4120.134 kb on - strand, within CA264_17700at 4120.156 kb on + strand, within CA264_17700at 4120.157 kb on - strand, within CA264_17700at 4120.162 kb on - strand, within CA264_17700at 4120.209 kb on + strand, within CA264_17700at 4120.236 kb on + strandat 4120.241 kb on + strandat 4120.241 kb on + strandat 4120.242 kb on - strandat 4120.242 kb on - strandat 4120.242 kb on - strandat 4120.250 kb on + strandat 4120.276 kb on - strandat 4120.302 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM
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4,117,266 + CA264_17690 0.80 +0.0
4,117,469 + -1.5
4,117,648 + -0.7
4,117,649 - -0.1
4,117,650 + +1.3
4,117,651 - -0.4
4,117,658 + +0.5
4,117,668 - -0.2
4,117,692 + -1.0
4,117,696 + -0.2
4,117,697 - +0.8
4,117,697 - +0.2
4,117,698 + -0.5
4,117,699 - -0.4
4,117,744 - -1.2
4,117,744 - +1.3
4,117,944 + -1.0
4,117,944 + -0.0
4,117,944 + +1.2
4,117,945 - -0.4
4,118,061 - -0.7
4,118,061 - +0.7
4,118,107 - -1.0
4,118,172 + +0.0
4,118,255 + +0.3
4,118,256 - -1.4
4,118,312 - CA264_17695 0.12 -1.8
4,118,323 - CA264_17695 0.13 -1.9
4,118,363 - CA264_17695 0.16 -1.5
4,118,369 - CA264_17695 0.17 -2.1
4,118,467 - CA264_17695 0.25 -3.7
4,118,590 + CA264_17695 0.36 -2.8
4,118,684 + CA264_17695 0.44 -1.6
4,118,698 - CA264_17695 0.45 -1.8
4,118,752 + CA264_17695 0.49 -1.5
4,118,793 + CA264_17695 0.53 -2.2
4,118,794 - CA264_17695 0.53 -1.5
4,118,820 + CA264_17695 0.55 -1.0
4,118,824 + CA264_17695 0.56 +1.0
4,118,825 - CA264_17695 0.56 -1.7
4,118,825 - CA264_17695 0.56 +0.0
4,118,851 + CA264_17695 0.58 -3.0
4,118,851 + CA264_17695 0.58 -0.1
4,118,852 - CA264_17695 0.58 -0.4
4,118,852 - CA264_17695 0.58 +0.6
4,118,852 - CA264_17695 0.58 +0.0
4,118,852 - CA264_17695 0.58 -3.1
4,118,852 - CA264_17695 0.58 -1.9
4,118,879 + CA264_17695 0.60 -1.1
4,118,880 - CA264_17695 0.60 -0.7
4,118,881 + CA264_17695 0.61 -0.2
4,118,909 + CA264_17695 0.63 -0.8
4,118,933 + CA264_17695 0.65 -1.7
4,118,937 + CA264_17695 0.65 -2.6
4,118,938 - CA264_17695 0.65 -1.0
4,118,966 - CA264_17695 0.68 +0.0
4,118,988 - CA264_17695 0.70 -0.2
4,119,012 - CA264_17695 0.72 -1.6
4,119,084 - CA264_17695 0.78 -0.2
4,119,124 - CA264_17695 0.81 -1.5
4,119,161 - CA264_17695 0.84 +2.2
4,119,171 + CA264_17695 0.85 -2.5
4,119,171 + CA264_17695 0.85 -1.8
4,119,232 - +1.0
4,119,332 - +0.3
4,119,350 - -0.5
4,119,351 + -0.3
4,119,352 - -0.1
4,119,352 - +0.1
4,119,434 + -0.2
4,119,463 + +0.5
4,119,464 - +1.0
4,119,559 + -0.7
4,119,582 + -0.6
4,119,582 + -0.4
4,119,620 - +1.0
4,119,717 - CA264_17700 0.21 +0.9
4,119,733 + CA264_17700 0.23 -0.8
4,119,733 + CA264_17700 0.23 +0.2
4,119,733 + CA264_17700 0.23 +0.2
4,119,733 + CA264_17700 0.23 +0.7
4,119,759 + CA264_17700 0.26 -0.3
4,119,760 - CA264_17700 0.26 +0.3
4,119,788 - CA264_17700 0.30 +0.0
4,119,830 + CA264_17700 0.36 -0.2
4,119,831 - CA264_17700 0.36 -0.5
4,119,870 + CA264_17700 0.41 -1.0
4,119,899 + CA264_17700 0.45 +2.6
4,119,900 - CA264_17700 0.45 -0.6
4,119,900 - CA264_17700 0.45 -0.9
4,119,900 - CA264_17700 0.45 +0.2
4,119,900 - CA264_17700 0.45 -0.7
4,119,903 + CA264_17700 0.46 -0.1
4,119,904 - CA264_17700 0.46 +0.2
4,119,907 - CA264_17700 0.46 +1.8
4,119,909 - CA264_17700 0.47 -0.6
4,119,967 + CA264_17700 0.54 +1.0
4,120,043 + CA264_17700 0.65 -0.7
4,120,044 - CA264_17700 0.65 -0.8
4,120,044 - CA264_17700 0.65 -0.3
4,120,045 + CA264_17700 0.65 -0.8
4,120,049 - CA264_17700 0.65 -0.8
4,120,049 - CA264_17700 0.65 -0.6
4,120,101 - CA264_17700 0.72 +1.8
4,120,105 - CA264_17700 0.73 -0.1
4,120,134 - CA264_17700 0.77 -0.9
4,120,134 - CA264_17700 0.77 -1.3
4,120,156 + CA264_17700 0.80 -0.1
4,120,157 - CA264_17700 0.80 -0.4
4,120,162 - CA264_17700 0.81 +0.3
4,120,209 + CA264_17700 0.87 +0.6
4,120,236 + -0.0
4,120,241 + -1.0
4,120,241 + -0.8
4,120,242 - -0.1
4,120,242 - +0.2
4,120,242 - -2.0
4,120,250 + +0.6
4,120,276 - +0.8
4,120,302 + -1.1

Or see this region's nucleotide sequence