Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17345 and CA264_17350 are separated by 67 nucleotides CA264_17350 and CA264_17355 are separated by 349 nucleotides
CA264_17345: CA264_17345 - ABC transporter ATP-binding protein, at 4,042,486 to 4,044,300
_17345
CA264_17350: CA264_17350 - hypothetical protein, at 4,044,368 to 4,045,135
_17350
CA264_17355: CA264_17355 - ribonuclease R, at 4,045,485 to 4,047,767
_17355
Position (kb)
4044
4045
4046 Strain fitness (log2 ratio)
-1
0
1
2 at 4043.445 kb on + strand, within CA264_17345 at 4043.445 kb on + strand, within CA264_17345 at 4043.488 kb on + strand, within CA264_17345 at 4043.565 kb on - strand, within CA264_17345 at 4044.009 kb on - strand, within CA264_17345 at 4044.203 kb on - strand at 4044.216 kb on + strand at 4044.218 kb on + strand at 4044.218 kb on + strand at 4044.219 kb on - strand at 4044.250 kb on - strand at 4044.252 kb on - strand at 4044.299 kb on - strand at 4044.367 kb on + strand at 4044.368 kb on - strand at 4044.383 kb on + strand at 4044.383 kb on + strand at 4044.383 kb on + strand at 4044.417 kb on + strand at 4044.417 kb on + strand at 4044.417 kb on + strand at 4044.418 kb on - strand at 4044.418 kb on - strand at 4044.418 kb on - strand at 4044.418 kb on - strand at 4044.436 kb on + strand at 4044.444 kb on + strand at 4044.465 kb on + strand, within CA264_17350 at 4044.466 kb on - strand, within CA264_17350 at 4044.574 kb on - strand, within CA264_17350 at 4044.574 kb on - strand, within CA264_17350 at 4044.574 kb on - strand, within CA264_17350 at 4044.620 kb on + strand, within CA264_17350 at 4044.621 kb on - strand, within CA264_17350 at 4044.660 kb on - strand, within CA264_17350 at 4044.692 kb on - strand, within CA264_17350 at 4044.735 kb on - strand, within CA264_17350 at 4044.779 kb on - strand, within CA264_17350 at 4044.926 kb on + strand, within CA264_17350 at 4044.926 kb on + strand, within CA264_17350 at 4044.926 kb on + strand, within CA264_17350 at 4044.996 kb on - strand, within CA264_17350 at 4045.014 kb on + strand, within CA264_17350 at 4045.015 kb on - strand, within CA264_17350 at 4045.015 kb on - strand, within CA264_17350 at 4045.032 kb on + strand, within CA264_17350 at 4045.033 kb on - strand, within CA264_17350 at 4045.033 kb on - strand, within CA264_17350 at 4045.045 kb on + strand, within CA264_17350 at 4045.046 kb on - strand, within CA264_17350 at 4045.046 kb on - strand, within CA264_17350 at 4045.046 kb on - strand, within CA264_17350 at 4045.046 kb on - strand, within CA264_17350 at 4045.046 kb on - strand, within CA264_17350 at 4045.046 kb on - strand, within CA264_17350 at 4045.048 kb on - strand, within CA264_17350 at 4045.133 kb on + strand at 4045.134 kb on - strand at 4045.134 kb on - strand at 4045.257 kb on - strand at 4045.257 kb on - strand at 4045.320 kb on + strand at 4045.331 kb on - strand at 4045.331 kb on - strand at 4045.334 kb on + strand at 4045.399 kb on + strand at 4045.399 kb on + strand at 4045.400 kb on - strand at 4045.401 kb on + strand at 4045.401 kb on + strand at 4045.402 kb on - strand at 4045.402 kb on - strand at 4045.404 kb on + strand at 4045.404 kb on + strand at 4045.408 kb on + strand at 4045.423 kb on - strand at 4045.494 kb on - strand at 4045.494 kb on - strand at 4045.837 kb on - strand, within CA264_17355 at 4045.837 kb on - strand, within CA264_17355 at 4045.903 kb on - strand, within CA264_17355 at 4045.904 kb on + strand, within CA264_17355 at 4045.904 kb on + strand, within CA264_17355 at 4045.910 kb on - strand, within CA264_17355 at 4046.036 kb on - strand, within CA264_17355
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 4,043,445 + CA264_17345 0.53 -1.1 4,043,445 + CA264_17345 0.53 -0.5 4,043,488 + CA264_17345 0.55 -0.4 4,043,565 - CA264_17345 0.59 -1.6 4,044,009 - CA264_17345 0.84 -1.1 4,044,203 - +0.0 4,044,216 + +0.5 4,044,218 + -0.4 4,044,218 + +0.2 4,044,219 - -1.1 4,044,250 - +0.1 4,044,252 - -1.0 4,044,299 - +1.0 4,044,367 + -0.5 4,044,368 - +0.4 4,044,383 + -1.0 4,044,383 + +0.3 4,044,383 + +1.9 4,044,417 + -0.1 4,044,417 + -0.3 4,044,417 + -0.4 4,044,418 - +0.1 4,044,418 - +0.7 4,044,418 - -0.8 4,044,418 - +0.4 4,044,436 + -0.9 4,044,444 + +0.1 4,044,465 + CA264_17350 0.13 +0.0 4,044,466 - CA264_17350 0.13 +0.0 4,044,574 - CA264_17350 0.27 +0.3 4,044,574 - CA264_17350 0.27 +1.8 4,044,574 - CA264_17350 0.27 +0.5 4,044,620 + CA264_17350 0.33 -0.1 4,044,621 - CA264_17350 0.33 +0.6 4,044,660 - CA264_17350 0.38 +1.3 4,044,692 - CA264_17350 0.42 +0.0 4,044,735 - CA264_17350 0.48 +0.2 4,044,779 - CA264_17350 0.54 +0.0 4,044,926 + CA264_17350 0.73 +0.5 4,044,926 + CA264_17350 0.73 +0.2 4,044,926 + CA264_17350 0.73 -1.3 4,044,996 - CA264_17350 0.82 +0.6 4,045,014 + CA264_17350 0.84 +0.1 4,045,015 - CA264_17350 0.84 -1.0 4,045,015 - CA264_17350 0.84 +1.3 4,045,032 + CA264_17350 0.86 -0.0 4,045,033 - CA264_17350 0.87 -1.7 4,045,033 - CA264_17350 0.87 -0.4 4,045,045 + CA264_17350 0.88 -0.1 4,045,046 - CA264_17350 0.88 +0.8 4,045,046 - CA264_17350 0.88 -0.3 4,045,046 - CA264_17350 0.88 -0.4 4,045,046 - CA264_17350 0.88 +0.4 4,045,046 - CA264_17350 0.88 +0.2 4,045,046 - CA264_17350 0.88 +0.6 4,045,048 - CA264_17350 0.89 +0.3 4,045,133 + +0.0 4,045,134 - -0.2 4,045,134 - -1.1 4,045,257 - +0.3 4,045,257 - +1.0 4,045,320 + -0.1 4,045,331 - +0.2 4,045,331 - -0.3 4,045,334 + -0.1 4,045,399 + -1.2 4,045,399 + -0.3 4,045,400 - +2.0 4,045,401 + +0.2 4,045,401 + -0.4 4,045,402 - -0.3 4,045,402 - -0.1 4,045,404 + -0.3 4,045,404 + +0.2 4,045,408 + -0.6 4,045,423 - +1.7 4,045,494 - +0.8 4,045,494 - +0.5 4,045,837 - CA264_17355 0.15 +0.2 4,045,837 - CA264_17355 0.15 +0.3 4,045,903 - CA264_17355 0.18 -0.2 4,045,904 + CA264_17355 0.18 +0.2 4,045,904 + CA264_17355 0.18 +0.3 4,045,910 - CA264_17355 0.19 -0.3 4,046,036 - CA264_17355 0.24 +0.6
Or see this region's nucleotide sequence