Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17140 and CA264_17145 are separated by 369 nucleotides CA264_17145 and CA264_17150 are separated by 502 nucleotides CA264_17150 and CA264_17155 are separated by 124 nucleotides
CA264_17140: CA264_17140 - hypothetical protein, at 3,990,204 to 3,990,920
_17140
CA264_17145: CA264_17145 - class II fumarate hydratase, at 3,991,290 to 3,992,687
_17145
CA264_17150: CA264_17150 - hypothetical protein, at 3,993,190 to 3,993,531
_17150
CA264_17155: CA264_17155 - hypothetical protein, at 3,993,656 to 3,994,987
_17155
Position (kb)
3991
3992
3993 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3990.337 kb on - strand, within CA264_17140 at 3990.356 kb on - strand, within CA264_17140 at 3990.363 kb on - strand, within CA264_17140 at 3990.365 kb on + strand, within CA264_17140 at 3990.372 kb on + strand, within CA264_17140 at 3990.562 kb on + strand, within CA264_17140 at 3990.562 kb on + strand, within CA264_17140 at 3990.573 kb on + strand, within CA264_17140 at 3990.624 kb on - strand, within CA264_17140 at 3990.630 kb on + strand, within CA264_17140 at 3990.630 kb on + strand, within CA264_17140 at 3990.637 kb on + strand, within CA264_17140 at 3990.638 kb on - strand, within CA264_17140 at 3990.638 kb on - strand, within CA264_17140 at 3990.682 kb on - strand, within CA264_17140 at 3990.700 kb on + strand, within CA264_17140 at 3990.706 kb on + strand, within CA264_17140 at 3990.728 kb on - strand, within CA264_17140 at 3990.728 kb on - strand, within CA264_17140 at 3990.736 kb on + strand, within CA264_17140 at 3990.808 kb on - strand, within CA264_17140 at 3990.808 kb on - strand, within CA264_17140 at 3990.849 kb on + strand at 3990.919 kb on - strand at 3990.945 kb on + strand at 3990.946 kb on - strand at 3990.946 kb on - strand at 3991.072 kb on + strand at 3991.077 kb on + strand at 3991.077 kb on + strand at 3991.078 kb on - strand at 3991.236 kb on - strand at 3991.241 kb on - strand at 3991.255 kb on + strand at 3991.256 kb on - strand at 3991.270 kb on + strand at 3991.282 kb on - strand at 3992.685 kb on + strand at 3992.686 kb on - strand at 3992.693 kb on + strand at 3992.693 kb on + strand at 3992.698 kb on - strand at 3992.698 kb on - strand at 3992.735 kb on - strand at 3992.786 kb on - strand at 3992.795 kb on + strand at 3992.796 kb on - strand at 3992.796 kb on - strand at 3992.796 kb on - strand at 3992.796 kb on - strand at 3992.799 kb on + strand at 3992.799 kb on + strand at 3992.799 kb on + strand at 3992.803 kb on - strand at 3992.854 kb on + strand at 3992.856 kb on - strand at 3992.858 kb on - strand at 3992.861 kb on - strand at 3992.863 kb on + strand at 3992.867 kb on + strand at 3992.868 kb on - strand at 3992.868 kb on - strand at 3992.868 kb on - strand at 3992.869 kb on + strand at 3992.870 kb on - strand at 3992.909 kb on + strand at 3992.912 kb on + strand at 3992.913 kb on - strand at 3992.915 kb on + strand at 3992.937 kb on + strand at 3992.960 kb on + strand at 3992.960 kb on + strand at 3992.960 kb on + strand at 3992.960 kb on + strand at 3992.993 kb on - strand at 3992.993 kb on - strand at 3993.010 kb on + strand at 3993.021 kb on + strand at 3993.035 kb on - strand at 3993.036 kb on + strand at 3993.037 kb on - strand at 3993.069 kb on + strand at 3993.199 kb on - strand at 3993.199 kb on - strand at 3993.243 kb on + strand, within CA264_17150 at 3993.243 kb on + strand, within CA264_17150 at 3993.246 kb on - strand, within CA264_17150 at 3993.281 kb on - strand, within CA264_17150 at 3993.316 kb on - strand, within CA264_17150 at 3993.317 kb on + strand, within CA264_17150 at 3993.318 kb on - strand, within CA264_17150 at 3993.369 kb on - strand, within CA264_17150 at 3993.373 kb on - strand, within CA264_17150 at 3993.417 kb on + strand, within CA264_17150 at 3993.512 kb on + strand at 3993.512 kb on + strand at 3993.514 kb on + strand at 3993.514 kb on + strand at 3993.517 kb on - strand at 3993.517 kb on - strand at 3993.530 kb on - strand at 3993.530 kb on - strand at 3993.616 kb on + strand at 3993.617 kb on - strand at 3993.617 kb on - strand at 3993.619 kb on - strand at 3993.619 kb on - strand at 3993.641 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 3,990,337 - CA264_17140 0.19 +0.1 3,990,356 - CA264_17140 0.21 -0.1 3,990,363 - CA264_17140 0.22 -0.5 3,990,365 + CA264_17140 0.22 +0.5 3,990,372 + CA264_17140 0.23 -0.2 3,990,562 + CA264_17140 0.50 -1.0 3,990,562 + CA264_17140 0.50 -0.9 3,990,573 + CA264_17140 0.51 -0.1 3,990,624 - CA264_17140 0.59 +2.3 3,990,630 + CA264_17140 0.59 -0.0 3,990,630 + CA264_17140 0.59 +0.6 3,990,637 + CA264_17140 0.60 +2.3 3,990,638 - CA264_17140 0.61 +0.6 3,990,638 - CA264_17140 0.61 +0.4 3,990,682 - CA264_17140 0.67 -1.0 3,990,700 + CA264_17140 0.69 +0.3 3,990,706 + CA264_17140 0.70 -0.4 3,990,728 - CA264_17140 0.73 -0.8 3,990,728 - CA264_17140 0.73 +1.8 3,990,736 + CA264_17140 0.74 -0.0 3,990,808 - CA264_17140 0.84 +0.3 3,990,808 - CA264_17140 0.84 +0.6 3,990,849 + +0.2 3,990,919 - -0.6 3,990,945 + -0.0 3,990,946 - +0.2 3,990,946 - +0.6 3,991,072 + -0.4 3,991,077 + -0.6 3,991,077 + -0.6 3,991,078 - +0.1 3,991,236 - +1.3 3,991,241 - -0.1 3,991,255 + -0.3 3,991,256 - +0.0 3,991,270 + -0.4 3,991,282 - +0.4 3,992,685 + +2.9 3,992,686 - -1.2 3,992,693 + +0.3 3,992,693 + -0.8 3,992,698 - -0.8 3,992,698 - +0.4 3,992,735 - +0.2 3,992,786 - -1.1 3,992,795 + -0.2 3,992,796 - -1.2 3,992,796 - +0.0 3,992,796 - -0.3 3,992,796 - -0.7 3,992,799 + +0.7 3,992,799 + -0.2 3,992,799 + -0.1 3,992,803 - -0.8 3,992,854 + +1.0 3,992,856 - -0.1 3,992,858 - -0.5 3,992,861 - -0.2 3,992,863 + -0.8 3,992,867 + -1.2 3,992,868 - -0.5 3,992,868 - -0.1 3,992,868 - +1.8 3,992,869 + +0.3 3,992,870 - -0.0 3,992,909 + -1.7 3,992,912 + -0.5 3,992,913 - -0.1 3,992,915 + -0.2 3,992,937 + +0.3 3,992,960 + -0.2 3,992,960 + -0.1 3,992,960 + +0.4 3,992,960 + -0.0 3,992,993 - -0.0 3,992,993 - -0.2 3,993,010 + +0.9 3,993,021 + +0.3 3,993,035 - +1.1 3,993,036 + +0.4 3,993,037 - -0.5 3,993,069 + -0.1 3,993,199 - -0.6 3,993,199 - -0.5 3,993,243 + CA264_17150 0.15 -0.1 3,993,243 + CA264_17150 0.15 +0.1 3,993,246 - CA264_17150 0.16 -0.2 3,993,281 - CA264_17150 0.27 +0.6 3,993,316 - CA264_17150 0.37 +0.1 3,993,317 + CA264_17150 0.37 -1.9 3,993,318 - CA264_17150 0.37 +0.0 3,993,369 - CA264_17150 0.52 -0.6 3,993,373 - CA264_17150 0.54 -0.2 3,993,417 + CA264_17150 0.66 -0.1 3,993,512 + -1.2 3,993,512 + -0.3 3,993,514 + +0.6 3,993,514 + -0.2 3,993,517 - -0.8 3,993,517 - -1.8 3,993,530 - -0.6 3,993,530 - -0.2 3,993,616 + +0.1 3,993,617 - -0.4 3,993,617 - +0.3 3,993,619 - -0.3 3,993,619 - -0.6 3,993,641 - -1.0
Or see this region's nucleotide sequence