Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17130 and CA264_17135 are separated by 270 nucleotides CA264_17135 and CA264_17140 are separated by 24 nucleotides CA264_17140 and CA264_17145 are separated by 369 nucleotides
CA264_17130: CA264_17130 - histidine kinase, at 3,986,505 to 3,989,426
_17130
CA264_17135: CA264_17135 - hypothetical protein, at 3,989,697 to 3,990,179
_17135
CA264_17140: CA264_17140 - hypothetical protein, at 3,990,204 to 3,990,920
_17140
CA264_17145: CA264_17145 - class II fumarate hydratase, at 3,991,290 to 3,992,687
_17145
Position (kb)
3990
3991 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3989.237 kb on - strand at 3989.253 kb on - strand at 3989.325 kb on - strand at 3989.389 kb on + strand at 3989.397 kb on + strand at 3989.397 kb on + strand at 3989.397 kb on + strand at 3989.397 kb on + strand at 3989.499 kb on - strand at 3989.499 kb on - strand at 3989.575 kb on + strand at 3989.575 kb on + strand at 3989.593 kb on + strand at 3989.594 kb on - strand at 3989.594 kb on - strand at 3989.598 kb on - strand at 3989.598 kb on - strand at 3989.617 kb on - strand at 3989.751 kb on - strand, within CA264_17135 at 3989.868 kb on + strand, within CA264_17135 at 3989.868 kb on + strand, within CA264_17135 at 3989.968 kb on + strand, within CA264_17135 at 3989.969 kb on - strand, within CA264_17135 at 3989.969 kb on - strand, within CA264_17135 at 3990.063 kb on + strand, within CA264_17135 at 3990.063 kb on + strand, within CA264_17135 at 3990.076 kb on + strand, within CA264_17135 at 3990.076 kb on + strand, within CA264_17135 at 3990.076 kb on + strand, within CA264_17135 at 3990.076 kb on + strand, within CA264_17135 at 3990.077 kb on - strand, within CA264_17135 at 3990.149 kb on + strand at 3990.149 kb on + strand at 3990.174 kb on + strand at 3990.175 kb on - strand at 3990.178 kb on - strand at 3990.198 kb on + strand at 3990.198 kb on + strand at 3990.199 kb on - strand at 3990.199 kb on - strand at 3990.199 kb on - strand at 3990.254 kb on - strand at 3990.337 kb on - strand, within CA264_17140 at 3990.356 kb on - strand, within CA264_17140 at 3990.363 kb on - strand, within CA264_17140 at 3990.365 kb on + strand, within CA264_17140 at 3990.372 kb on + strand, within CA264_17140 at 3990.562 kb on + strand, within CA264_17140 at 3990.562 kb on + strand, within CA264_17140 at 3990.573 kb on + strand, within CA264_17140 at 3990.624 kb on - strand, within CA264_17140 at 3990.630 kb on + strand, within CA264_17140 at 3990.630 kb on + strand, within CA264_17140 at 3990.637 kb on + strand, within CA264_17140 at 3990.638 kb on - strand, within CA264_17140 at 3990.638 kb on - strand, within CA264_17140 at 3990.682 kb on - strand, within CA264_17140 at 3990.700 kb on + strand, within CA264_17140 at 3990.706 kb on + strand, within CA264_17140 at 3990.728 kb on - strand, within CA264_17140 at 3990.728 kb on - strand, within CA264_17140 at 3990.736 kb on + strand, within CA264_17140 at 3990.808 kb on - strand, within CA264_17140 at 3990.808 kb on - strand, within CA264_17140 at 3990.849 kb on + strand at 3990.919 kb on - strand at 3990.945 kb on + strand at 3990.946 kb on - strand at 3990.946 kb on - strand at 3991.072 kb on + strand at 3991.077 kb on + strand at 3991.077 kb on + strand at 3991.078 kb on - strand at 3991.236 kb on - strand at 3991.241 kb on - strand at 3991.255 kb on + strand at 3991.256 kb on - strand at 3991.270 kb on + strand at 3991.282 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 3,989,237 - -0.3 3,989,253 - +0.2 3,989,325 - +0.6 3,989,389 + -1.0 3,989,397 + +0.9 3,989,397 + -1.0 3,989,397 + -0.0 3,989,397 + +0.4 3,989,499 - -0.8 3,989,499 - -2.2 3,989,575 + -0.6 3,989,575 + -0.5 3,989,593 + -0.6 3,989,594 - +0.0 3,989,594 - -0.0 3,989,598 - -0.3 3,989,598 - -1.8 3,989,617 - +0.5 3,989,751 - CA264_17135 0.11 +0.2 3,989,868 + CA264_17135 0.35 -0.1 3,989,868 + CA264_17135 0.35 +0.4 3,989,968 + CA264_17135 0.56 -0.1 3,989,969 - CA264_17135 0.56 +0.2 3,989,969 - CA264_17135 0.56 -0.9 3,990,063 + CA264_17135 0.76 +0.3 3,990,063 + CA264_17135 0.76 -0.2 3,990,076 + CA264_17135 0.78 -0.1 3,990,076 + CA264_17135 0.78 -2.1 3,990,076 + CA264_17135 0.78 +0.3 3,990,076 + CA264_17135 0.78 +0.0 3,990,077 - CA264_17135 0.79 +0.2 3,990,149 + -0.0 3,990,149 + -0.4 3,990,174 + +0.8 3,990,175 - -0.2 3,990,178 - +0.2 3,990,198 + -0.6 3,990,198 + -0.5 3,990,199 - +0.8 3,990,199 - +0.1 3,990,199 - -0.6 3,990,254 - +0.2 3,990,337 - CA264_17140 0.19 +0.1 3,990,356 - CA264_17140 0.21 -0.1 3,990,363 - CA264_17140 0.22 -0.5 3,990,365 + CA264_17140 0.22 +0.5 3,990,372 + CA264_17140 0.23 -0.2 3,990,562 + CA264_17140 0.50 -1.0 3,990,562 + CA264_17140 0.50 -0.9 3,990,573 + CA264_17140 0.51 -0.1 3,990,624 - CA264_17140 0.59 +2.3 3,990,630 + CA264_17140 0.59 -0.0 3,990,630 + CA264_17140 0.59 +0.6 3,990,637 + CA264_17140 0.60 +2.3 3,990,638 - CA264_17140 0.61 +0.6 3,990,638 - CA264_17140 0.61 +0.4 3,990,682 - CA264_17140 0.67 -1.0 3,990,700 + CA264_17140 0.69 +0.3 3,990,706 + CA264_17140 0.70 -0.4 3,990,728 - CA264_17140 0.73 -0.8 3,990,728 - CA264_17140 0.73 +1.8 3,990,736 + CA264_17140 0.74 -0.0 3,990,808 - CA264_17140 0.84 +0.3 3,990,808 - CA264_17140 0.84 +0.6 3,990,849 + +0.2 3,990,919 - -0.6 3,990,945 + -0.0 3,990,946 - +0.2 3,990,946 - +0.6 3,991,072 + -0.4 3,991,077 + -0.6 3,991,077 + -0.6 3,991,078 - +0.1 3,991,236 - +1.3 3,991,241 - -0.1 3,991,255 + -0.3 3,991,256 - +0.0 3,991,270 + -0.4 3,991,282 - +0.4
Or see this region's nucleotide sequence