Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17035 and CA264_17040 overlap by 1 nucleotides CA264_17040 and CA264_17045 are separated by 27 nucleotides CA264_17045 and CA264_17050 are separated by 191 nucleotides
CA264_17035: CA264_17035 - ribose 5-phosphate isomerase B, at 3,964,379 to 3,964,816
_17035
CA264_17040: CA264_17040 - twin-arginine translocase subunit TatC, at 3,964,816 to 3,965,661
_17040
CA264_17045: CA264_17045 - serine hydroxymethyltransferase, at 3,965,689 to 3,966,963
_17045
CA264_17050: CA264_17050 - hypothetical protein, at 3,967,155 to 3,973,004
_17050
Position (kb)
3965
3966
3967 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3965.708 kb on + strand at 3965.728 kb on + strand at 3965.838 kb on + strand, within CA264_17045 at 3965.839 kb on - strand, within CA264_17045 at 3966.018 kb on + strand, within CA264_17045 at 3966.018 kb on + strand, within CA264_17045 at 3966.086 kb on + strand, within CA264_17045 at 3966.310 kb on - strand, within CA264_17045 at 3966.569 kb on + strand, within CA264_17045 at 3966.673 kb on - strand, within CA264_17045 at 3966.776 kb on - strand, within CA264_17045 at 3966.776 kb on - strand, within CA264_17045 at 3966.824 kb on + strand, within CA264_17045 at 3966.946 kb on - strand at 3966.946 kb on - strand at 3966.952 kb on - strand at 3966.975 kb on - strand at 3966.998 kb on - strand at 3967.037 kb on + strand at 3967.138 kb on + strand at 3967.153 kb on + strand at 3967.153 kb on + strand at 3967.156 kb on + strand at 3967.157 kb on - strand at 3967.180 kb on + strand at 3967.182 kb on + strand at 3967.182 kb on + strand at 3967.182 kb on + strand at 3967.183 kb on - strand at 3967.213 kb on + strand at 3967.213 kb on + strand at 3967.213 kb on + strand at 3967.213 kb on + strand at 3967.214 kb on - strand at 3967.214 kb on - strand at 3967.214 kb on - strand at 3967.237 kb on + strand at 3967.251 kb on + strand at 3967.252 kb on - strand at 3967.278 kb on + strand at 3967.279 kb on - strand at 3967.279 kb on - strand at 3967.291 kb on + strand at 3967.291 kb on + strand at 3967.292 kb on - strand at 3967.292 kb on - strand at 3967.335 kb on - strand at 3967.335 kb on - strand at 3967.341 kb on + strand at 3967.342 kb on - strand at 3967.342 kb on - strand at 3967.355 kb on + strand at 3967.373 kb on - strand at 3967.373 kb on - strand at 3967.407 kb on + strand at 3967.437 kb on + strand at 3967.450 kb on + strand at 3967.451 kb on - strand at 3967.467 kb on + strand at 3967.468 kb on - strand at 3967.473 kb on + strand at 3967.492 kb on + strand at 3967.599 kb on + strand at 3967.740 kb on - strand, within CA264_17050 at 3967.771 kb on - strand, within CA264_17050 at 3967.781 kb on + strand, within CA264_17050 at 3967.803 kb on + strand, within CA264_17050 at 3967.803 kb on + strand, within CA264_17050 at 3967.804 kb on - strand, within CA264_17050 at 3967.807 kb on + strand, within CA264_17050 at 3967.807 kb on + strand, within CA264_17050 at 3967.807 kb on + strand, within CA264_17050 at 3967.807 kb on + strand, within CA264_17050 at 3967.921 kb on - strand, within CA264_17050
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 3,965,708 + -0.7 3,965,728 + -2.3 3,965,838 + CA264_17045 0.12 -2.0 3,965,839 - CA264_17045 0.12 -4.0 3,966,018 + CA264_17045 0.26 -3.5 3,966,018 + CA264_17045 0.26 -2.0 3,966,086 + CA264_17045 0.31 -3.7 3,966,310 - CA264_17045 0.49 -3.0 3,966,569 + CA264_17045 0.69 -0.2 3,966,673 - CA264_17045 0.77 -0.8 3,966,776 - CA264_17045 0.85 -2.8 3,966,776 - CA264_17045 0.85 -2.6 3,966,824 + CA264_17045 0.89 -2.4 3,966,946 - -2.3 3,966,946 - -0.8 3,966,952 - -1.9 3,966,975 - -1.8 3,966,998 - -1.7 3,967,037 + +0.6 3,967,138 + +0.4 3,967,153 + +0.5 3,967,153 + -0.8 3,967,156 + -0.8 3,967,157 - -0.3 3,967,180 + -0.9 3,967,182 + -0.1 3,967,182 + -0.8 3,967,182 + +0.7 3,967,183 - -0.3 3,967,213 + +0.5 3,967,213 + -0.9 3,967,213 + -1.5 3,967,213 + -0.4 3,967,214 - -0.2 3,967,214 - +0.1 3,967,214 - +0.4 3,967,237 + +0.0 3,967,251 + -2.4 3,967,252 - +0.2 3,967,278 + +0.1 3,967,279 - -0.7 3,967,279 - -0.4 3,967,291 + -1.9 3,967,291 + -0.1 3,967,292 - -0.1 3,967,292 - -0.3 3,967,335 - +1.0 3,967,335 - -0.5 3,967,341 + +0.3 3,967,342 - +0.0 3,967,342 - -0.1 3,967,355 + +0.6 3,967,373 - +0.3 3,967,373 - -0.2 3,967,407 + -0.1 3,967,437 + +0.9 3,967,450 + -0.2 3,967,451 - -0.1 3,967,467 + -0.3 3,967,468 - -0.4 3,967,473 + -1.2 3,967,492 + +0.2 3,967,599 + +0.5 3,967,740 - CA264_17050 0.10 -1.0 3,967,771 - CA264_17050 0.11 -0.1 3,967,781 + CA264_17050 0.11 +1.6 3,967,803 + CA264_17050 0.11 -1.0 3,967,803 + CA264_17050 0.11 +0.0 3,967,804 - CA264_17050 0.11 +0.1 3,967,807 + CA264_17050 0.11 -0.0 3,967,807 + CA264_17050 0.11 +0.2 3,967,807 + CA264_17050 0.11 -0.1 3,967,807 + CA264_17050 0.11 +0.4 3,967,921 - CA264_17050 0.13 +0.0
Or see this region's nucleotide sequence