Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_16635 and CA264_16640 are separated by 381 nucleotides CA264_16640 and CA264_16645 are separated by 102 nucleotides
CA264_16635: CA264_16635 - AAA family ATPase, at 3,867,520 to 3,868,515
_16635
CA264_16640: CA264_16640 - twin-arginine translocation pathway signal, at 3,868,897 to 3,869,514
_16640
CA264_16645: CA264_16645 - peptidase C69, at 3,869,617 to 3,870,933
_16645
Position (kb)
3868
3869
3870 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3867.904 kb on + strand, within CA264_16635 at 3867.927 kb on + strand, within CA264_16635 at 3867.931 kb on - strand, within CA264_16635 at 3867.937 kb on + strand, within CA264_16635 at 3867.940 kb on + strand, within CA264_16635 at 3867.941 kb on - strand, within CA264_16635 at 3867.946 kb on + strand, within CA264_16635 at 3867.947 kb on - strand, within CA264_16635 at 3867.947 kb on - strand, within CA264_16635 at 3867.947 kb on - strand, within CA264_16635 at 3867.968 kb on + strand, within CA264_16635 at 3867.983 kb on + strand, within CA264_16635 at 3867.989 kb on - strand, within CA264_16635 at 3867.989 kb on - strand, within CA264_16635 at 3868.023 kb on - strand, within CA264_16635 at 3868.023 kb on - strand, within CA264_16635 at 3868.100 kb on + strand, within CA264_16635 at 3868.100 kb on + strand, within CA264_16635 at 3868.100 kb on + strand, within CA264_16635 at 3868.100 kb on + strand, within CA264_16635 at 3868.101 kb on - strand, within CA264_16635 at 3868.101 kb on - strand, within CA264_16635 at 3868.101 kb on - strand, within CA264_16635 at 3868.113 kb on - strand, within CA264_16635 at 3868.189 kb on - strand, within CA264_16635 at 3868.193 kb on - strand, within CA264_16635 at 3868.198 kb on - strand, within CA264_16635 at 3868.267 kb on + strand, within CA264_16635 at 3868.268 kb on - strand, within CA264_16635 at 3868.301 kb on - strand, within CA264_16635 at 3868.423 kb on + strand at 3868.447 kb on + strand at 3868.456 kb on + strand at 3868.483 kb on - strand at 3868.499 kb on - strand at 3868.574 kb on - strand at 3868.574 kb on - strand at 3868.583 kb on + strand at 3868.583 kb on + strand at 3868.584 kb on - strand at 3868.585 kb on + strand at 3868.722 kb on + strand at 3868.722 kb on + strand at 3868.722 kb on + strand at 3868.723 kb on - strand at 3868.735 kb on - strand at 3868.735 kb on - strand at 3868.737 kb on + strand at 3868.737 kb on + strand at 3868.737 kb on + strand at 3868.738 kb on - strand at 3868.738 kb on - strand at 3868.741 kb on + strand at 3868.741 kb on + strand at 3868.741 kb on + strand at 3868.741 kb on + strand at 3868.742 kb on - strand at 3868.742 kb on - strand at 3868.748 kb on + strand at 3868.748 kb on + strand at 3868.778 kb on + strand at 3868.780 kb on + strand at 3868.780 kb on + strand at 3868.780 kb on + strand at 3868.781 kb on - strand at 3868.787 kb on - strand at 3868.906 kb on - strand at 3868.913 kb on + strand at 3868.913 kb on + strand at 3868.913 kb on + strand at 3868.913 kb on + strand at 3868.914 kb on - strand at 3868.917 kb on + strand at 3868.917 kb on + strand at 3868.917 kb on + strand at 3868.917 kb on + strand at 3868.939 kb on - strand at 3868.998 kb on - strand, within CA264_16640 at 3869.010 kb on + strand, within CA264_16640 at 3869.011 kb on - strand, within CA264_16640 at 3869.012 kb on + strand, within CA264_16640 at 3869.012 kb on + strand, within CA264_16640 at 3869.013 kb on - strand, within CA264_16640 at 3869.017 kb on + strand, within CA264_16640 at 3869.023 kb on + strand, within CA264_16640 at 3869.101 kb on - strand, within CA264_16640 at 3869.138 kb on + strand, within CA264_16640 at 3869.155 kb on - strand, within CA264_16640 at 3869.231 kb on - strand, within CA264_16640 at 3869.231 kb on - strand, within CA264_16640 at 3869.231 kb on - strand, within CA264_16640 at 3869.251 kb on + strand, within CA264_16640 at 3869.252 kb on - strand, within CA264_16640 at 3869.280 kb on - strand, within CA264_16640 at 3869.355 kb on + strand, within CA264_16640 at 3869.355 kb on + strand, within CA264_16640 at 3869.418 kb on - strand, within CA264_16640 at 3869.425 kb on - strand, within CA264_16640 at 3869.561 kb on - strand at 3869.588 kb on + strand at 3869.599 kb on + strand at 3869.603 kb on - strand at 3869.604 kb on + strand at 3869.604 kb on + strand at 3869.605 kb on - strand at 3869.605 kb on - strand at 3869.605 kb on - strand at 3869.608 kb on + strand at 3869.609 kb on - strand at 3869.609 kb on - strand at 3869.609 kb on - strand at 3869.609 kb on - strand at 3869.843 kb on - strand, within CA264_16645 at 3869.855 kb on + strand, within CA264_16645 at 3869.877 kb on + strand, within CA264_16645 at 3869.996 kb on + strand, within CA264_16645 at 3869.997 kb on - strand, within CA264_16645 at 3870.082 kb on + strand, within CA264_16645 at 3870.090 kb on + strand, within CA264_16645 at 3870.102 kb on - strand, within CA264_16645 at 3870.141 kb on + strand, within CA264_16645 at 3870.205 kb on - strand, within CA264_16645 at 3870.205 kb on - strand, within CA264_16645 at 3870.250 kb on + strand, within CA264_16645 at 3870.250 kb on + strand, within CA264_16645 at 3870.250 kb on + strand, within CA264_16645 at 3870.250 kb on + strand, within CA264_16645 at 3870.252 kb on + strand, within CA264_16645 at 3870.252 kb on + strand, within CA264_16645 at 3870.259 kb on - strand, within CA264_16645 at 3870.260 kb on + strand, within CA264_16645 at 3870.341 kb on - strand, within CA264_16645 at 3870.359 kb on + strand, within CA264_16645 at 3870.370 kb on + strand, within CA264_16645 at 3870.374 kb on + strand, within CA264_16645 at 3870.375 kb on - strand, within CA264_16645 at 3870.399 kb on + strand, within CA264_16645 at 3870.421 kb on + strand, within CA264_16645 at 3870.421 kb on + strand, within CA264_16645 at 3870.483 kb on + strand, within CA264_16645 at 3870.484 kb on - strand, within CA264_16645 at 3870.486 kb on - strand, within CA264_16645
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 3,867,904 + CA264_16635 0.39 +0.1 3,867,927 + CA264_16635 0.41 -0.9 3,867,931 - CA264_16635 0.41 -0.4 3,867,937 + CA264_16635 0.42 +0.9 3,867,940 + CA264_16635 0.42 -0.2 3,867,941 - CA264_16635 0.42 +0.8 3,867,946 + CA264_16635 0.43 +1.1 3,867,947 - CA264_16635 0.43 -0.5 3,867,947 - CA264_16635 0.43 -0.2 3,867,947 - CA264_16635 0.43 +0.1 3,867,968 + CA264_16635 0.45 -0.3 3,867,983 + CA264_16635 0.46 -0.3 3,867,989 - CA264_16635 0.47 -0.2 3,867,989 - CA264_16635 0.47 -0.5 3,868,023 - CA264_16635 0.51 -0.2 3,868,023 - CA264_16635 0.51 +0.4 3,868,100 + CA264_16635 0.58 +0.6 3,868,100 + CA264_16635 0.58 -0.4 3,868,100 + CA264_16635 0.58 -1.8 3,868,100 + CA264_16635 0.58 -0.9 3,868,101 - CA264_16635 0.58 -0.9 3,868,101 - CA264_16635 0.58 -0.8 3,868,101 - CA264_16635 0.58 -2.0 3,868,113 - CA264_16635 0.60 -0.7 3,868,189 - CA264_16635 0.67 -0.1 3,868,193 - CA264_16635 0.68 -0.5 3,868,198 - CA264_16635 0.68 -0.5 3,868,267 + CA264_16635 0.75 -1.4 3,868,268 - CA264_16635 0.75 -0.2 3,868,301 - CA264_16635 0.78 -0.7 3,868,423 + +0.1 3,868,447 + +0.1 3,868,456 + +0.4 3,868,483 - +0.1 3,868,499 - -0.2 3,868,574 - -0.3 3,868,574 - -1.1 3,868,583 + +0.1 3,868,583 + -0.4 3,868,584 - -0.6 3,868,585 + -0.9 3,868,722 + -0.5 3,868,722 + +0.2 3,868,722 + +0.1 3,868,723 - -0.4 3,868,735 - -0.3 3,868,735 - -0.2 3,868,737 + +0.3 3,868,737 + -1.4 3,868,737 + +0.1 3,868,738 - +0.4 3,868,738 - -0.2 3,868,741 + -0.1 3,868,741 + -0.1 3,868,741 + -0.1 3,868,741 + +0.1 3,868,742 - -0.7 3,868,742 - -0.3 3,868,748 + +0.1 3,868,748 + -0.4 3,868,778 + -1.0 3,868,780 + +0.3 3,868,780 + +0.1 3,868,780 + +0.5 3,868,781 - -0.7 3,868,787 - -0.4 3,868,906 - -0.7 3,868,913 + +0.5 3,868,913 + +0.3 3,868,913 + -0.1 3,868,913 + -0.3 3,868,914 - -0.0 3,868,917 + +1.9 3,868,917 + -0.9 3,868,917 + -2.4 3,868,917 + +0.5 3,868,939 - -0.8 3,868,998 - CA264_16640 0.16 +0.0 3,869,010 + CA264_16640 0.18 +0.4 3,869,011 - CA264_16640 0.18 -0.8 3,869,012 + CA264_16640 0.19 +0.5 3,869,012 + CA264_16640 0.19 -0.2 3,869,013 - CA264_16640 0.19 -0.9 3,869,017 + CA264_16640 0.19 -0.6 3,869,023 + CA264_16640 0.20 +0.2 3,869,101 - CA264_16640 0.33 +1.1 3,869,138 + CA264_16640 0.39 -0.7 3,869,155 - CA264_16640 0.42 -0.1 3,869,231 - CA264_16640 0.54 -0.5 3,869,231 - CA264_16640 0.54 -0.3 3,869,231 - CA264_16640 0.54 +1.0 3,869,251 + CA264_16640 0.57 -0.3 3,869,252 - CA264_16640 0.57 -1.2 3,869,280 - CA264_16640 0.62 +0.8 3,869,355 + CA264_16640 0.74 +0.3 3,869,355 + CA264_16640 0.74 -1.3 3,869,418 - CA264_16640 0.84 -0.4 3,869,425 - CA264_16640 0.85 +0.3 3,869,561 - +1.1 3,869,588 + +0.5 3,869,599 + -0.5 3,869,603 - +0.4 3,869,604 + -1.6 3,869,604 + -0.7 3,869,605 - -0.7 3,869,605 - -0.3 3,869,605 - -0.5 3,869,608 + -0.2 3,869,609 - -0.6 3,869,609 - -0.4 3,869,609 - +0.5 3,869,609 - +0.3 3,869,843 - CA264_16645 0.17 -0.2 3,869,855 + CA264_16645 0.18 -2.1 3,869,877 + CA264_16645 0.20 +0.5 3,869,996 + CA264_16645 0.29 -0.2 3,869,997 - CA264_16645 0.29 -0.0 3,870,082 + CA264_16645 0.35 +0.7 3,870,090 + CA264_16645 0.36 -0.6 3,870,102 - CA264_16645 0.37 -0.1 3,870,141 + CA264_16645 0.40 +0.7 3,870,205 - CA264_16645 0.45 +0.5 3,870,205 - CA264_16645 0.45 -0.7 3,870,250 + CA264_16645 0.48 +0.0 3,870,250 + CA264_16645 0.48 +0.1 3,870,250 + CA264_16645 0.48 -0.1 3,870,250 + CA264_16645 0.48 -0.3 3,870,252 + CA264_16645 0.48 -0.1 3,870,252 + CA264_16645 0.48 -0.1 3,870,259 - CA264_16645 0.49 -0.5 3,870,260 + CA264_16645 0.49 -0.9 3,870,341 - CA264_16645 0.55 -0.1 3,870,359 + CA264_16645 0.56 -1.7 3,870,370 + CA264_16645 0.57 +0.0 3,870,374 + CA264_16645 0.57 +0.1 3,870,375 - CA264_16645 0.58 -0.6 3,870,399 + CA264_16645 0.59 -0.1 3,870,421 + CA264_16645 0.61 -1.2 3,870,421 + CA264_16645 0.61 -0.2 3,870,483 + CA264_16645 0.66 -0.2 3,870,484 - CA264_16645 0.66 +0.2 3,870,486 - CA264_16645 0.66 +0.5
Or see this region's nucleotide sequence