Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_16490 and CA264_16495 are separated by 299 nucleotides CA264_16495 and CA264_16500 are separated by 92 nucleotides CA264_16500 and CA264_16505 are separated by 6 nucleotides
CA264_16490: CA264_16490 - glucose-1-phosphate thymidylyltransferase, at 3,833,150 to 3,834,151
_16490
CA264_16495: CA264_16495 - LemA family protein, at 3,834,451 to 3,835,029
_16495
CA264_16500: CA264_16500 - hypothetical protein, at 3,835,122 to 3,835,559
_16500
CA264_16505: CA264_16505 - methanol dehydrogenase, at 3,835,566 to 3,836,339
_16505
Position (kb)
3834
3835
3836 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3833.787 kb on + strand, within CA264_16490 at 3833.788 kb on - strand, within CA264_16490 at 3833.789 kb on - strand, within CA264_16490 at 3833.800 kb on + strand, within CA264_16490 at 3833.804 kb on - strand, within CA264_16490 at 3833.817 kb on - strand, within CA264_16490 at 3833.842 kb on + strand, within CA264_16490 at 3833.855 kb on - strand, within CA264_16490 at 3833.855 kb on - strand, within CA264_16490 at 3833.868 kb on + strand, within CA264_16490 at 3833.869 kb on - strand, within CA264_16490 at 3833.940 kb on - strand, within CA264_16490 at 3833.940 kb on - strand, within CA264_16490 at 3833.965 kb on - strand, within CA264_16490 at 3833.998 kb on + strand, within CA264_16490 at 3833.999 kb on - strand, within CA264_16490 at 3834.016 kb on + strand, within CA264_16490 at 3834.053 kb on + strand at 3834.053 kb on + strand at 3834.053 kb on + strand at 3834.056 kb on - strand at 3834.059 kb on - strand at 3834.059 kb on - strand at 3834.085 kb on + strand at 3834.138 kb on - strand at 3834.138 kb on - strand at 3834.139 kb on + strand at 3834.140 kb on - strand at 3834.140 kb on - strand at 3834.152 kb on - strand at 3834.158 kb on + strand at 3834.190 kb on + strand at 3834.233 kb on + strand at 3834.391 kb on + strand at 3834.397 kb on + strand at 3834.407 kb on + strand at 3834.407 kb on + strand at 3834.407 kb on + strand at 3834.424 kb on + strand at 3834.425 kb on - strand at 3834.426 kb on + strand at 3834.427 kb on - strand at 3834.427 kb on - strand at 3834.436 kb on + strand at 3834.470 kb on - strand at 3834.477 kb on - strand at 3834.486 kb on - strand at 3834.664 kb on - strand, within CA264_16495 at 3834.666 kb on - strand, within CA264_16495 at 3834.666 kb on - strand, within CA264_16495 at 3834.910 kb on + strand, within CA264_16495 at 3835.050 kb on - strand at 3835.083 kb on - strand at 3835.091 kb on + strand at 3835.117 kb on - strand at 3835.244 kb on - strand, within CA264_16500 at 3835.465 kb on + strand, within CA264_16500 at 3835.557 kb on + strand at 3835.557 kb on + strand at 3835.565 kb on + strand at 3835.566 kb on - strand at 3835.584 kb on - strand at 3835.669 kb on - strand, within CA264_16505 at 3835.842 kb on + strand, within CA264_16505 at 3835.843 kb on - strand, within CA264_16505 at 3835.920 kb on + strand, within CA264_16505 at 3835.920 kb on + strand, within CA264_16505 at 3835.920 kb on + strand, within CA264_16505 at 3835.921 kb on - strand, within CA264_16505 at 3835.921 kb on - strand, within CA264_16505 at 3835.921 kb on - strand, within CA264_16505 at 3835.924 kb on + strand, within CA264_16505 at 3835.924 kb on + strand, within CA264_16505 at 3835.963 kb on + strand, within CA264_16505 at 3836.019 kb on - strand, within CA264_16505
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 3,833,787 + CA264_16490 0.64 -1.3 3,833,788 - CA264_16490 0.64 -0.4 3,833,789 - CA264_16490 0.64 +0.9 3,833,800 + CA264_16490 0.65 +0.0 3,833,804 - CA264_16490 0.65 -1.7 3,833,817 - CA264_16490 0.67 -0.1 3,833,842 + CA264_16490 0.69 -0.9 3,833,855 - CA264_16490 0.70 +1.1 3,833,855 - CA264_16490 0.70 -0.8 3,833,868 + CA264_16490 0.72 -0.5 3,833,869 - CA264_16490 0.72 +0.2 3,833,940 - CA264_16490 0.79 +2.1 3,833,940 - CA264_16490 0.79 -0.0 3,833,965 - CA264_16490 0.81 +0.6 3,833,998 + CA264_16490 0.85 +0.9 3,833,999 - CA264_16490 0.85 -2.1 3,834,016 + CA264_16490 0.86 -0.6 3,834,053 + +0.1 3,834,053 + -0.3 3,834,053 + +1.4 3,834,056 - -0.1 3,834,059 - -0.1 3,834,059 - -0.5 3,834,085 + +0.3 3,834,138 - -0.8 3,834,138 - +1.4 3,834,139 + -0.4 3,834,140 - +0.0 3,834,140 - -0.8 3,834,152 - -0.5 3,834,158 + -0.7 3,834,190 + -0.3 3,834,233 + +0.2 3,834,391 + -0.4 3,834,397 + -2.3 3,834,407 + +1.1 3,834,407 + +1.0 3,834,407 + -1.3 3,834,424 + -2.0 3,834,425 - -1.6 3,834,426 + +0.4 3,834,427 - +0.4 3,834,427 - +1.2 3,834,436 + +0.6 3,834,470 - -0.9 3,834,477 - +0.5 3,834,486 - -0.9 3,834,664 - CA264_16495 0.37 -1.7 3,834,666 - CA264_16495 0.37 -1.6 3,834,666 - CA264_16495 0.37 -1.8 3,834,910 + CA264_16495 0.79 -1.6 3,835,050 - -2.2 3,835,083 - -0.2 3,835,091 + +0.3 3,835,117 - -2.7 3,835,244 - CA264_16500 0.28 -2.9 3,835,465 + CA264_16500 0.78 -0.8 3,835,557 + +0.6 3,835,557 + -0.1 3,835,565 + -0.7 3,835,566 - -0.9 3,835,584 - -0.3 3,835,669 - CA264_16505 0.13 +2.0 3,835,842 + CA264_16505 0.36 -0.4 3,835,843 - CA264_16505 0.36 -1.1 3,835,920 + CA264_16505 0.46 +0.5 3,835,920 + CA264_16505 0.46 -0.1 3,835,920 + CA264_16505 0.46 -0.3 3,835,921 - CA264_16505 0.46 -1.1 3,835,921 - CA264_16505 0.46 +0.6 3,835,921 - CA264_16505 0.46 -0.0 3,835,924 + CA264_16505 0.46 +1.3 3,835,924 + CA264_16505 0.46 -0.1 3,835,963 + CA264_16505 0.51 -0.2 3,836,019 - CA264_16505 0.59 -0.8
Or see this region's nucleotide sequence