Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_16340 and CA264_16345 are separated by 4 nucleotides CA264_16345 and CA264_16350 are separated by 11 nucleotides
CA264_16340: CA264_16340 - hypothetical protein, at 3,799,447 to 3,802,284
_16340
CA264_16345: CA264_16345 - transglycosylase, at 3,802,289 to 3,804,604
_16345
CA264_16350: CA264_16350 - excinuclease ABC subunit C, at 3,804,616 to 3,806,436
_16350
Position (kb)
3802
3803
3804
3805 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1
2 at 3801.372 kb on + strand, within CA264_16340 at 3801.373 kb on - strand, within CA264_16340 at 3801.373 kb on - strand, within CA264_16340 at 3801.373 kb on - strand, within CA264_16340 at 3801.388 kb on + strand, within CA264_16340 at 3801.388 kb on + strand, within CA264_16340 at 3801.388 kb on + strand, within CA264_16340 at 3801.410 kb on - strand, within CA264_16340 at 3801.410 kb on - strand, within CA264_16340 at 3801.467 kb on - strand, within CA264_16340 at 3801.568 kb on - strand, within CA264_16340 at 3801.724 kb on - strand, within CA264_16340 at 3801.744 kb on + strand, within CA264_16340 at 3801.950 kb on - strand, within CA264_16340 at 3801.953 kb on - strand, within CA264_16340 at 3801.953 kb on - strand, within CA264_16340 at 3801.955 kb on + strand, within CA264_16340 at 3801.955 kb on + strand, within CA264_16340 at 3801.955 kb on + strand, within CA264_16340 at 3801.956 kb on - strand, within CA264_16340 at 3801.956 kb on - strand, within CA264_16340 at 3802.010 kb on - strand at 3802.018 kb on + strand at 3802.021 kb on - strand at 3802.030 kb on + strand at 3802.033 kb on + strand at 3802.034 kb on - strand at 3802.071 kb on + strand at 3802.121 kb on + strand at 3802.132 kb on + strand at 3802.132 kb on + strand at 3802.176 kb on + strand at 3802.185 kb on - strand at 3804.602 kb on + strand at 3804.706 kb on + strand at 3804.748 kb on + strand at 3804.804 kb on + strand, within CA264_16350 at 3804.870 kb on + strand, within CA264_16350 at 3804.870 kb on + strand, within CA264_16350 at 3804.925 kb on + strand, within CA264_16350 at 3804.925 kb on + strand, within CA264_16350 at 3804.926 kb on - strand, within CA264_16350 at 3805.020 kb on + strand, within CA264_16350 at 3805.020 kb on + strand, within CA264_16350 at 3805.021 kb on - strand, within CA264_16350 at 3805.082 kb on - strand, within CA264_16350 at 3805.252 kb on + strand, within CA264_16350 at 3805.258 kb on - strand, within CA264_16350 at 3805.376 kb on + strand, within CA264_16350 at 3805.514 kb on + strand, within CA264_16350 at 3805.515 kb on - strand, within CA264_16350 at 3805.578 kb on + strand, within CA264_16350
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 3,801,372 + CA264_16340 0.68 -0.1 3,801,373 - CA264_16340 0.68 -0.6 3,801,373 - CA264_16340 0.68 -0.7 3,801,373 - CA264_16340 0.68 -2.1 3,801,388 + CA264_16340 0.68 -0.6 3,801,388 + CA264_16340 0.68 -0.5 3,801,388 + CA264_16340 0.68 -0.0 3,801,410 - CA264_16340 0.69 -0.0 3,801,410 - CA264_16340 0.69 -0.8 3,801,467 - CA264_16340 0.71 -0.5 3,801,568 - CA264_16340 0.75 +0.9 3,801,724 - CA264_16340 0.80 -0.4 3,801,744 + CA264_16340 0.81 -0.4 3,801,950 - CA264_16340 0.88 -0.2 3,801,953 - CA264_16340 0.88 +0.9 3,801,953 - CA264_16340 0.88 -0.5 3,801,955 + CA264_16340 0.88 -0.8 3,801,955 + CA264_16340 0.88 -1.6 3,801,955 + CA264_16340 0.88 -0.9 3,801,956 - CA264_16340 0.88 -0.9 3,801,956 - CA264_16340 0.88 +0.1 3,802,010 - +0.5 3,802,018 + -1.3 3,802,021 - +0.4 3,802,030 + -1.2 3,802,033 + +0.2 3,802,034 - +1.6 3,802,071 + -0.9 3,802,121 + -1.0 3,802,132 + -0.1 3,802,132 + -0.6 3,802,176 + -0.1 3,802,185 - -0.4 3,804,602 + -0.3 3,804,706 + -1.6 3,804,748 + -0.8 3,804,804 + CA264_16350 0.10 -0.6 3,804,870 + CA264_16350 0.14 -0.5 3,804,870 + CA264_16350 0.14 -0.1 3,804,925 + CA264_16350 0.17 -0.5 3,804,925 + CA264_16350 0.17 -0.7 3,804,926 - CA264_16350 0.17 -5.8 3,805,020 + CA264_16350 0.22 +0.6 3,805,020 + CA264_16350 0.22 -0.6 3,805,021 - CA264_16350 0.22 +0.2 3,805,082 - CA264_16350 0.26 +1.3 3,805,252 + CA264_16350 0.35 +0.2 3,805,258 - CA264_16350 0.35 -3.3 3,805,376 + CA264_16350 0.42 -0.3 3,805,514 + CA264_16350 0.49 -0.0 3,805,515 - CA264_16350 0.49 -3.1 3,805,578 + CA264_16350 0.53 +1.9
Or see this region's nucleotide sequence