Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_16155 and CA264_16160 are separated by 256 nucleotides CA264_16160 and CA264_16165 are separated by 16 nucleotides CA264_16165 and CA264_16170 are separated by 190 nucleotides
CA264_16155: CA264_16155 - hypothetical protein, at 3,762,591 to 3,763,331
_16155
CA264_16160: CA264_16160 - hypothetical protein, at 3,763,588 to 3,763,914
_16160
CA264_16165: CA264_16165 - hypothetical protein, at 3,763,931 to 3,764,479
_16165
CA264_16170: CA264_16170 - hypothetical protein, at 3,764,670 to 3,765,293
_16170
Position (kb)
3763
3764
3765 Strain fitness (log2 ratio)
-2
-1
0
1 at 3762.987 kb on - strand, within CA264_16155 at 3763.065 kb on - strand, within CA264_16155 at 3763.158 kb on - strand, within CA264_16155 at 3763.207 kb on - strand, within CA264_16155 at 3763.232 kb on + strand, within CA264_16155 at 3763.315 kb on - strand at 3763.453 kb on + strand at 3763.548 kb on + strand at 3763.576 kb on - strand at 3763.579 kb on + strand at 3763.579 kb on + strand at 3763.932 kb on + strand at 3763.933 kb on - strand at 3763.959 kb on - strand at 3764.014 kb on + strand, within CA264_16165 at 3764.106 kb on - strand, within CA264_16165 at 3764.107 kb on + strand, within CA264_16165 at 3764.107 kb on + strand, within CA264_16165 at 3764.107 kb on + strand, within CA264_16165 at 3764.108 kb on - strand, within CA264_16165 at 3764.108 kb on - strand, within CA264_16165 at 3764.154 kb on - strand, within CA264_16165 at 3764.250 kb on + strand, within CA264_16165 at 3764.250 kb on + strand, within CA264_16165 at 3764.274 kb on - strand, within CA264_16165 at 3764.483 kb on + strand at 3764.484 kb on - strand at 3764.484 kb on - strand at 3764.486 kb on - strand at 3764.487 kb on + strand at 3764.501 kb on + strand at 3764.512 kb on + strand at 3764.580 kb on - strand at 3764.580 kb on - strand at 3764.656 kb on + strand at 3764.656 kb on + strand at 3764.656 kb on + strand at 3764.695 kb on + strand at 3764.699 kb on - strand at 3764.707 kb on + strand at 3765.073 kb on + strand, within CA264_16170 at 3765.073 kb on + strand, within CA264_16170 at 3765.073 kb on + strand, within CA264_16170 at 3765.073 kb on + strand, within CA264_16170 at 3765.074 kb on - strand, within CA264_16170 at 3765.076 kb on + strand, within CA264_16170 at 3765.076 kb on + strand, within CA264_16170 at 3765.077 kb on - strand, within CA264_16170 at 3765.167 kb on - strand, within CA264_16170 at 3765.176 kb on + strand, within CA264_16170 at 3765.238 kb on + strand at 3765.239 kb on - strand at 3765.258 kb on + strand at 3765.276 kb on + strand at 3765.276 kb on + strand at 3765.300 kb on - strand at 3765.404 kb on + strand at 3765.405 kb on - strand at 3765.405 kb on - strand at 3765.405 kb on - strand at 3765.405 kb on - strand at 3765.430 kb on + strand at 3765.434 kb on + strand at 3765.440 kb on + strand at 3765.441 kb on - strand at 3765.444 kb on + strand at 3765.445 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 3,762,987 - CA264_16155 0.53 -0.2 3,763,065 - CA264_16155 0.64 -0.3 3,763,158 - CA264_16155 0.77 -1.7 3,763,207 - CA264_16155 0.83 -0.3 3,763,232 + CA264_16155 0.87 +0.2 3,763,315 - -0.3 3,763,453 + +0.3 3,763,548 + -0.8 3,763,576 - -0.2 3,763,579 + -1.2 3,763,579 + +0.9 3,763,932 + -0.1 3,763,933 - -0.3 3,763,959 - +0.2 3,764,014 + CA264_16165 0.15 -0.7 3,764,106 - CA264_16165 0.32 -1.9 3,764,107 + CA264_16165 0.32 +0.5 3,764,107 + CA264_16165 0.32 -0.3 3,764,107 + CA264_16165 0.32 -0.0 3,764,108 - CA264_16165 0.32 -0.4 3,764,108 - CA264_16165 0.32 -1.4 3,764,154 - CA264_16165 0.41 +0.1 3,764,250 + CA264_16165 0.58 -1.3 3,764,250 + CA264_16165 0.58 -0.7 3,764,274 - CA264_16165 0.62 -0.7 3,764,483 + +0.1 3,764,484 - +0.4 3,764,484 - -0.1 3,764,486 - +0.0 3,764,487 + +0.7 3,764,501 + +1.4 3,764,512 + +1.1 3,764,580 - +0.8 3,764,580 - -0.1 3,764,656 + +0.7 3,764,656 + +0.3 3,764,656 + -0.0 3,764,695 + +0.1 3,764,699 - -0.1 3,764,707 + -0.6 3,765,073 + CA264_16170 0.65 -0.1 3,765,073 + CA264_16170 0.65 +1.7 3,765,073 + CA264_16170 0.65 -0.1 3,765,073 + CA264_16170 0.65 -0.2 3,765,074 - CA264_16170 0.65 -0.3 3,765,076 + CA264_16170 0.65 -1.1 3,765,076 + CA264_16170 0.65 -0.0 3,765,077 - CA264_16170 0.65 -0.8 3,765,167 - CA264_16170 0.80 +0.5 3,765,176 + CA264_16170 0.81 -1.3 3,765,238 + -0.6 3,765,239 - +0.6 3,765,258 + +0.3 3,765,276 + +0.7 3,765,276 + +0.8 3,765,300 - +0.9 3,765,404 + +0.8 3,765,405 - +1.3 3,765,405 - -0.2 3,765,405 - -0.3 3,765,405 - -0.4 3,765,430 + -0.2 3,765,434 + -0.5 3,765,440 + -0.7 3,765,441 - -0.6 3,765,444 + -0.4 3,765,445 - -0.1
Or see this region's nucleotide sequence