Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15870 and CA264_15875 are separated by 984 nucleotides CA264_15875 and CA264_15880 overlap by 1 nucleotides CA264_15880 and CA264_15885 are separated by 417 nucleotides
CA264_15870: CA264_15870 - long-chain fatty acid--CoA ligase, at 3,702,922 to 3,704,574
_15870
CA264_15875: CA264_15875 - bacillithiol biosynthesis cysteine-adding enzyme BshC, at 3,705,559 to 3,707,136
_15875
CA264_15880: CA264_15880 - 5-formyltetrahydrofolate cyclo-ligase, at 3,707,136 to 3,707,714
_15880
CA264_15885: CA264_15885 - TetR family transcriptional regulator, at 3,708,132 to 3,708,665
_15885
Position (kb)
3705
3706
3707
3708 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 3704.569 kb on - strand at 3704.575 kb on - strand at 3704.585 kb on - strand at 3704.605 kb on + strand at 3704.606 kb on - strand at 3704.649 kb on - strand at 3704.649 kb on - strand at 3704.654 kb on + strand at 3704.654 kb on + strand at 3704.744 kb on + strand at 3704.745 kb on - strand at 3704.745 kb on - strand at 3704.745 kb on - strand at 3704.750 kb on + strand at 3704.750 kb on + strand at 3704.750 kb on + strand at 3704.780 kb on - strand at 3704.780 kb on - strand at 3704.780 kb on - strand at 3704.781 kb on + strand at 3704.782 kb on - strand at 3704.805 kb on + strand at 3704.850 kb on + strand at 3704.850 kb on + strand at 3704.850 kb on + strand at 3704.851 kb on - strand at 3704.958 kb on + strand at 3705.034 kb on + strand at 3705.034 kb on + strand at 3705.034 kb on + strand at 3705.034 kb on + strand at 3705.034 kb on + strand at 3705.041 kb on + strand at 3705.041 kb on + strand at 3705.043 kb on + strand at 3705.043 kb on + strand at 3705.052 kb on + strand at 3705.052 kb on + strand at 3705.053 kb on - strand at 3705.058 kb on + strand at 3705.063 kb on + strand at 3705.104 kb on + strand at 3705.221 kb on + strand at 3705.225 kb on + strand at 3705.255 kb on + strand at 3705.267 kb on + strand at 3705.268 kb on - strand at 3705.268 kb on - strand at 3705.281 kb on + strand at 3705.281 kb on + strand at 3705.329 kb on + strand at 3705.362 kb on - strand at 3705.362 kb on - strand at 3705.368 kb on + strand at 3705.368 kb on + strand at 3705.381 kb on + strand at 3705.382 kb on - strand at 3705.395 kb on + strand at 3705.412 kb on - strand at 3705.423 kb on + strand at 3705.423 kb on + strand at 3705.424 kb on - strand at 3705.456 kb on + strand at 3705.549 kb on + strand at 3705.591 kb on - strand at 3705.595 kb on + strand at 3705.595 kb on + strand at 3705.634 kb on + strand at 3705.656 kb on + strand at 3705.656 kb on + strand at 3705.656 kb on + strand at 3705.657 kb on - strand at 3705.667 kb on + strand at 3705.668 kb on - strand at 3705.769 kb on + strand, within CA264_15875 at 3705.770 kb on - strand, within CA264_15875 at 3705.770 kb on - strand, within CA264_15875 at 3705.771 kb on + strand, within CA264_15875 at 3705.772 kb on - strand, within CA264_15875 at 3705.772 kb on - strand, within CA264_15875 at 3705.772 kb on - strand, within CA264_15875 at 3705.772 kb on - strand, within CA264_15875 at 3705.772 kb on - strand, within CA264_15875 at 3705.844 kb on - strand, within CA264_15875 at 3705.887 kb on - strand, within CA264_15875 at 3705.887 kb on - strand, within CA264_15875 at 3705.895 kb on + strand, within CA264_15875 at 3705.895 kb on + strand, within CA264_15875 at 3705.896 kb on - strand, within CA264_15875 at 3705.916 kb on - strand, within CA264_15875 at 3705.916 kb on - strand, within CA264_15875 at 3705.916 kb on - strand, within CA264_15875 at 3705.918 kb on + strand, within CA264_15875 at 3705.918 kb on + strand, within CA264_15875 at 3705.918 kb on + strand, within CA264_15875 at 3705.919 kb on - strand, within CA264_15875 at 3705.919 kb on - strand, within CA264_15875 at 3705.919 kb on - strand, within CA264_15875 at 3705.924 kb on + strand, within CA264_15875 at 3705.943 kb on + strand, within CA264_15875 at 3705.953 kb on - strand, within CA264_15875 at 3706.037 kb on - strand, within CA264_15875 at 3706.037 kb on - strand, within CA264_15875 at 3706.038 kb on + strand, within CA264_15875 at 3706.039 kb on - strand, within CA264_15875 at 3706.068 kb on - strand, within CA264_15875 at 3706.173 kb on + strand, within CA264_15875 at 3706.217 kb on + strand, within CA264_15875 at 3706.217 kb on + strand, within CA264_15875 at 3706.218 kb on - strand, within CA264_15875 at 3706.221 kb on + strand, within CA264_15875 at 3706.221 kb on + strand, within CA264_15875 at 3706.222 kb on - strand, within CA264_15875 at 3706.223 kb on + strand, within CA264_15875 at 3706.223 kb on + strand, within CA264_15875 at 3706.224 kb on - strand, within CA264_15875 at 3706.224 kb on - strand, within CA264_15875 at 3706.269 kb on - strand, within CA264_15875 at 3706.300 kb on - strand, within CA264_15875 at 3706.344 kb on + strand, within CA264_15875 at 3706.358 kb on - strand, within CA264_15875 at 3706.358 kb on - strand, within CA264_15875 at 3706.358 kb on - strand, within CA264_15875 at 3706.429 kb on + strand, within CA264_15875 at 3706.429 kb on + strand, within CA264_15875 at 3706.431 kb on + strand, within CA264_15875 at 3706.431 kb on + strand, within CA264_15875 at 3706.432 kb on - strand, within CA264_15875 at 3706.439 kb on + strand, within CA264_15875 at 3706.440 kb on - strand, within CA264_15875 at 3706.453 kb on - strand, within CA264_15875 at 3706.459 kb on - strand, within CA264_15875 at 3706.520 kb on + strand, within CA264_15875 at 3706.525 kb on - strand, within CA264_15875 at 3706.525 kb on - strand, within CA264_15875 at 3706.525 kb on - strand, within CA264_15875 at 3706.525 kb on - strand, within CA264_15875 at 3706.545 kb on + strand, within CA264_15875 at 3706.545 kb on + strand, within CA264_15875 at 3706.546 kb on - strand, within CA264_15875 at 3706.546 kb on - strand, within CA264_15875 at 3706.564 kb on + strand, within CA264_15875 at 3706.565 kb on - strand, within CA264_15875 at 3706.565 kb on - strand, within CA264_15875 at 3706.625 kb on - strand, within CA264_15875 at 3706.625 kb on - strand, within CA264_15875 at 3706.626 kb on + strand, within CA264_15875 at 3706.626 kb on + strand, within CA264_15875 at 3706.627 kb on - strand, within CA264_15875 at 3706.627 kb on - strand, within CA264_15875 at 3706.760 kb on + strand, within CA264_15875 at 3706.761 kb on - strand, within CA264_15875 at 3706.814 kb on + strand, within CA264_15875 at 3706.856 kb on + strand, within CA264_15875 at 3706.863 kb on + strand, within CA264_15875 at 3706.971 kb on + strand, within CA264_15875 at 3706.972 kb on - strand, within CA264_15875 at 3706.995 kb on + strand at 3707.014 kb on - strand at 3707.027 kb on + strand at 3707.028 kb on + strand at 3707.058 kb on + strand at 3707.059 kb on - strand at 3707.305 kb on + strand, within CA264_15880 at 3707.411 kb on - strand, within CA264_15880 at 3707.476 kb on + strand, within CA264_15880 at 3707.636 kb on + strand, within CA264_15880 at 3707.849 kb on + strand at 3707.850 kb on - strand at 3707.883 kb on + strand at 3707.913 kb on - strand at 3707.968 kb on + strand at 3708.010 kb on - strand at 3708.019 kb on - strand at 3708.034 kb on - strand at 3708.115 kb on - strand at 3708.120 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 3,704,569 - -0.4 3,704,575 - +0.2 3,704,585 - +0.1 3,704,605 + +0.5 3,704,606 - +1.0 3,704,649 - +0.4 3,704,649 - +0.5 3,704,654 + +0.1 3,704,654 + -0.1 3,704,744 + -0.5 3,704,745 - -0.5 3,704,745 - +0.9 3,704,745 - -0.5 3,704,750 + +0.1 3,704,750 + +1.9 3,704,750 + +0.0 3,704,780 - +0.1 3,704,780 - -0.1 3,704,780 - -1.7 3,704,781 + +0.2 3,704,782 - -0.2 3,704,805 + +0.8 3,704,850 + -0.5 3,704,850 + +0.6 3,704,850 + -0.6 3,704,851 - -0.6 3,704,958 + -0.3 3,705,034 + -1.5 3,705,034 + +1.6 3,705,034 + +0.8 3,705,034 + +0.4 3,705,034 + -0.1 3,705,041 + -0.1 3,705,041 + +0.2 3,705,043 + -0.3 3,705,043 + -0.0 3,705,052 + +0.4 3,705,052 + +0.7 3,705,053 - +0.5 3,705,058 + -1.6 3,705,063 + +0.1 3,705,104 + -0.4 3,705,221 + -0.0 3,705,225 + +1.0 3,705,255 + -0.7 3,705,267 + -0.0 3,705,268 - +1.3 3,705,268 - +0.6 3,705,281 + +0.1 3,705,281 + +1.0 3,705,329 + +1.8 3,705,362 - -0.2 3,705,362 - +0.2 3,705,368 + +1.5 3,705,368 + -0.2 3,705,381 + +0.8 3,705,382 - -0.3 3,705,395 + +0.2 3,705,412 - +0.2 3,705,423 + -0.4 3,705,423 + -1.0 3,705,424 - +0.3 3,705,456 + +0.2 3,705,549 + +0.5 3,705,591 - +0.1 3,705,595 + -2.1 3,705,595 + -1.4 3,705,634 + -0.9 3,705,656 + -1.1 3,705,656 + -0.5 3,705,656 + -2.0 3,705,657 - -1.6 3,705,667 + -1.8 3,705,668 - -4.6 3,705,769 + CA264_15875 0.13 +0.5 3,705,770 - CA264_15875 0.13 -1.3 3,705,770 - CA264_15875 0.13 -1.0 3,705,771 + CA264_15875 0.13 -1.5 3,705,772 - CA264_15875 0.13 -2.0 3,705,772 - CA264_15875 0.13 -1.9 3,705,772 - CA264_15875 0.13 -2.1 3,705,772 - CA264_15875 0.13 -2.9 3,705,772 - CA264_15875 0.13 -3.3 3,705,844 - CA264_15875 0.18 -3.5 3,705,887 - CA264_15875 0.21 -1.6 3,705,887 - CA264_15875 0.21 -1.3 3,705,895 + CA264_15875 0.21 -0.2 3,705,895 + CA264_15875 0.21 -1.5 3,705,896 - CA264_15875 0.21 -2.0 3,705,916 - CA264_15875 0.23 -1.6 3,705,916 - CA264_15875 0.23 -3.3 3,705,916 - CA264_15875 0.23 -0.3 3,705,918 + CA264_15875 0.23 -0.3 3,705,918 + CA264_15875 0.23 -1.2 3,705,918 + CA264_15875 0.23 -1.7 3,705,919 - CA264_15875 0.23 +1.3 3,705,919 - CA264_15875 0.23 -1.4 3,705,919 - CA264_15875 0.23 -0.4 3,705,924 + CA264_15875 0.23 -2.0 3,705,943 + CA264_15875 0.24 -2.1 3,705,953 - CA264_15875 0.25 -2.1 3,706,037 - CA264_15875 0.30 -1.3 3,706,037 - CA264_15875 0.30 +1.5 3,706,038 + CA264_15875 0.30 -1.6 3,706,039 - CA264_15875 0.30 -0.8 3,706,068 - CA264_15875 0.32 -4.2 3,706,173 + CA264_15875 0.39 -2.1 3,706,217 + CA264_15875 0.42 -2.9 3,706,217 + CA264_15875 0.42 -1.0 3,706,218 - CA264_15875 0.42 -0.9 3,706,221 + CA264_15875 0.42 +0.9 3,706,221 + CA264_15875 0.42 -1.5 3,706,222 - CA264_15875 0.42 -1.1 3,706,223 + CA264_15875 0.42 -1.5 3,706,223 + CA264_15875 0.42 -0.2 3,706,224 - CA264_15875 0.42 -2.5 3,706,224 - CA264_15875 0.42 -2.4 3,706,269 - CA264_15875 0.45 -2.1 3,706,300 - CA264_15875 0.47 -2.7 3,706,344 + CA264_15875 0.50 -2.0 3,706,358 - CA264_15875 0.51 -2.5 3,706,358 - CA264_15875 0.51 -1.7 3,706,358 - CA264_15875 0.51 -3.1 3,706,429 + CA264_15875 0.55 +0.5 3,706,429 + CA264_15875 0.55 -1.6 3,706,431 + CA264_15875 0.55 -1.9 3,706,431 + CA264_15875 0.55 -3.1 3,706,432 - CA264_15875 0.55 -3.7 3,706,439 + CA264_15875 0.56 -1.9 3,706,440 - CA264_15875 0.56 -2.2 3,706,453 - CA264_15875 0.57 -2.7 3,706,459 - CA264_15875 0.57 -2.1 3,706,520 + CA264_15875 0.61 -1.8 3,706,525 - CA264_15875 0.61 -3.0 3,706,525 - CA264_15875 0.61 -2.9 3,706,525 - CA264_15875 0.61 -2.8 3,706,525 - CA264_15875 0.61 -2.6 3,706,545 + CA264_15875 0.62 -1.8 3,706,545 + CA264_15875 0.62 -1.1 3,706,546 - CA264_15875 0.63 -0.4 3,706,546 - CA264_15875 0.63 -0.3 3,706,564 + CA264_15875 0.64 -3.0 3,706,565 - CA264_15875 0.64 -2.6 3,706,565 - CA264_15875 0.64 -2.0 3,706,625 - CA264_15875 0.68 -1.4 3,706,625 - CA264_15875 0.68 -3.9 3,706,626 + CA264_15875 0.68 -1.3 3,706,626 + CA264_15875 0.68 -1.6 3,706,627 - CA264_15875 0.68 -1.9 3,706,627 - CA264_15875 0.68 -1.8 3,706,760 + CA264_15875 0.76 -0.9 3,706,761 - CA264_15875 0.76 -1.6 3,706,814 + CA264_15875 0.80 -0.4 3,706,856 + CA264_15875 0.82 -1.6 3,706,863 + CA264_15875 0.83 -2.5 3,706,971 + CA264_15875 0.89 -1.4 3,706,972 - CA264_15875 0.90 -0.5 3,706,995 + -1.8 3,707,014 - -1.0 3,707,027 + -1.0 3,707,028 + -2.3 3,707,058 + -0.5 3,707,059 - -2.3 3,707,305 + CA264_15880 0.29 -1.2 3,707,411 - CA264_15880 0.47 -1.0 3,707,476 + CA264_15880 0.59 -1.8 3,707,636 + CA264_15880 0.86 -1.5 3,707,849 + +0.6 3,707,850 - +0.9 3,707,883 + +0.7 3,707,913 - -0.4 3,707,968 + -0.6 3,708,010 - +0.3 3,708,019 - +1.2 3,708,034 - +0.1 3,708,115 - -0.1 3,708,120 - -0.4
Or see this region's nucleotide sequence