Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15520 and CA264_15525 are separated by 117 nucleotides CA264_15525 and CA264_15530 are separated by 25 nucleotides CA264_15530 and CA264_15535 are separated by 121 nucleotides
CA264_15520: CA264_15520 - hypothetical protein, at 3,633,945 to 3,634,130
_15520
CA264_15525: CA264_15525 - hypothetical protein, at 3,634,248 to 3,634,907
_15525
CA264_15530: CA264_15530 - hypothetical protein, at 3,634,933 to 3,635,505
_15530
CA264_15535: CA264_15535 - hypothetical protein, at 3,635,627 to 3,637,801
_15535
Position (kb)
3634
3635
3636 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3634.037 kb on - strand, within CA264_15520 at 3634.100 kb on + strand, within CA264_15520 at 3634.101 kb on - strand, within CA264_15520 at 3634.101 kb on - strand, within CA264_15520 at 3634.101 kb on - strand, within CA264_15520 at 3634.104 kb on + strand, within CA264_15520 at 3634.104 kb on + strand, within CA264_15520 at 3634.105 kb on - strand, within CA264_15520 at 3634.108 kb on - strand, within CA264_15520 at 3634.108 kb on - strand, within CA264_15520 at 3634.151 kb on - strand at 3634.152 kb on + strand at 3634.152 kb on + strand at 3634.152 kb on + strand at 3634.152 kb on + strand at 3634.152 kb on + strand at 3634.152 kb on + strand at 3634.153 kb on - strand at 3634.183 kb on + strand at 3634.183 kb on + strand at 3634.183 kb on + strand at 3634.183 kb on + strand at 3634.185 kb on + strand at 3634.186 kb on - strand at 3634.195 kb on + strand at 3634.196 kb on - strand at 3634.196 kb on - strand at 3634.196 kb on - strand at 3634.198 kb on + strand at 3634.214 kb on + strand at 3634.214 kb on + strand at 3634.264 kb on - strand at 3634.265 kb on + strand at 3634.296 kb on + strand at 3634.315 kb on + strand, within CA264_15525 at 3634.315 kb on + strand, within CA264_15525 at 3634.316 kb on - strand, within CA264_15525 at 3634.322 kb on + strand, within CA264_15525 at 3634.369 kb on - strand, within CA264_15525 at 3634.417 kb on + strand, within CA264_15525 at 3634.466 kb on + strand, within CA264_15525 at 3634.507 kb on + strand, within CA264_15525 at 3634.528 kb on - strand, within CA264_15525 at 3634.550 kb on + strand, within CA264_15525 at 3634.551 kb on - strand, within CA264_15525 at 3634.553 kb on + strand, within CA264_15525 at 3634.554 kb on - strand, within CA264_15525 at 3634.554 kb on - strand, within CA264_15525 at 3634.554 kb on - strand, within CA264_15525 at 3634.669 kb on - strand, within CA264_15525 at 3634.677 kb on + strand, within CA264_15525 at 3634.678 kb on - strand, within CA264_15525 at 3634.788 kb on + strand, within CA264_15525 at 3634.788 kb on + strand, within CA264_15525 at 3634.788 kb on + strand, within CA264_15525 at 3634.789 kb on - strand, within CA264_15525 at 3634.789 kb on - strand, within CA264_15525 at 3634.906 kb on - strand at 3635.100 kb on + strand, within CA264_15530 at 3635.100 kb on + strand, within CA264_15530 at 3635.218 kb on + strand, within CA264_15530 at 3635.219 kb on - strand, within CA264_15530 at 3635.237 kb on - strand, within CA264_15530 at 3635.274 kb on + strand, within CA264_15530 at 3635.275 kb on - strand, within CA264_15530 at 3635.275 kb on - strand, within CA264_15530 at 3635.275 kb on - strand, within CA264_15530 at 3635.282 kb on - strand, within CA264_15530 at 3635.292 kb on + strand, within CA264_15530 at 3635.355 kb on - strand, within CA264_15530 at 3635.484 kb on + strand at 3635.485 kb on - strand at 3635.489 kb on - strand at 3635.522 kb on + strand at 3635.523 kb on - strand at 3635.524 kb on + strand at 3635.525 kb on - strand at 3635.539 kb on + strand at 3635.539 kb on + strand at 3635.539 kb on + strand at 3635.540 kb on - strand at 3635.541 kb on + strand at 3635.541 kb on + strand at 3635.544 kb on + strand at 3635.544 kb on + strand at 3635.544 kb on + strand at 3635.545 kb on - strand at 3635.545 kb on - strand at 3635.615 kb on - strand at 3635.615 kb on - strand at 3635.622 kb on + strand at 3635.623 kb on - strand at 3635.635 kb on + strand at 3635.746 kb on - strand at 3635.835 kb on + strand at 3635.858 kb on + strand, within CA264_15535 at 3635.859 kb on - strand, within CA264_15535 at 3636.004 kb on + strand, within CA264_15535 at 3636.004 kb on + strand, within CA264_15535 at 3636.154 kb on + strand, within CA264_15535 at 3636.157 kb on - strand, within CA264_15535 at 3636.157 kb on - strand, within CA264_15535 at 3636.157 kb on - strand, within CA264_15535 at 3636.202 kb on - strand, within CA264_15535 at 3636.291 kb on - strand, within CA264_15535 at 3636.322 kb on + strand, within CA264_15535 at 3636.322 kb on + strand, within CA264_15535 at 3636.322 kb on + strand, within CA264_15535 at 3636.322 kb on + strand, within CA264_15535 at 3636.322 kb on + strand, within CA264_15535 at 3636.323 kb on - strand, within CA264_15535 at 3636.323 kb on - strand, within CA264_15535 at 3636.435 kb on - strand, within CA264_15535 at 3636.495 kb on - strand, within CA264_15535
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 3,634,037 - CA264_15520 0.49 +0.8 3,634,100 + CA264_15520 0.83 -1.6 3,634,101 - CA264_15520 0.84 -0.5 3,634,101 - CA264_15520 0.84 -1.0 3,634,101 - CA264_15520 0.84 -0.6 3,634,104 + CA264_15520 0.85 -1.3 3,634,104 + CA264_15520 0.85 -1.3 3,634,105 - CA264_15520 0.86 -1.7 3,634,108 - CA264_15520 0.88 -0.8 3,634,108 - CA264_15520 0.88 -0.2 3,634,151 - +0.1 3,634,152 + -1.2 3,634,152 + -1.3 3,634,152 + -1.2 3,634,152 + -0.2 3,634,152 + -0.2 3,634,152 + -0.1 3,634,153 - -0.5 3,634,183 + -0.9 3,634,183 + -0.6 3,634,183 + +0.7 3,634,183 + -0.5 3,634,185 + +0.9 3,634,186 - -0.3 3,634,195 + +1.1 3,634,196 - +0.0 3,634,196 - +1.4 3,634,196 - -0.2 3,634,198 + -1.9 3,634,214 + -0.6 3,634,214 + -0.8 3,634,264 - -0.8 3,634,265 + -0.3 3,634,296 + +0.3 3,634,315 + CA264_15525 0.10 -0.4 3,634,315 + CA264_15525 0.10 +0.1 3,634,316 - CA264_15525 0.10 +0.0 3,634,322 + CA264_15525 0.11 +0.3 3,634,369 - CA264_15525 0.18 -0.2 3,634,417 + CA264_15525 0.26 +0.2 3,634,466 + CA264_15525 0.33 +0.1 3,634,507 + CA264_15525 0.39 +1.6 3,634,528 - CA264_15525 0.42 -0.4 3,634,550 + CA264_15525 0.46 -0.0 3,634,551 - CA264_15525 0.46 +0.5 3,634,553 + CA264_15525 0.46 +0.8 3,634,554 - CA264_15525 0.46 +0.2 3,634,554 - CA264_15525 0.46 +0.2 3,634,554 - CA264_15525 0.46 +0.3 3,634,669 - CA264_15525 0.64 -0.2 3,634,677 + CA264_15525 0.65 +0.9 3,634,678 - CA264_15525 0.65 -0.5 3,634,788 + CA264_15525 0.82 -0.1 3,634,788 + CA264_15525 0.82 +0.1 3,634,788 + CA264_15525 0.82 +0.4 3,634,789 - CA264_15525 0.82 +1.3 3,634,789 - CA264_15525 0.82 -0.6 3,634,906 - +0.8 3,635,100 + CA264_15530 0.29 -0.0 3,635,100 + CA264_15530 0.29 -0.2 3,635,218 + CA264_15530 0.50 +1.2 3,635,219 - CA264_15530 0.50 -1.3 3,635,237 - CA264_15530 0.53 +0.6 3,635,274 + CA264_15530 0.60 -1.3 3,635,275 - CA264_15530 0.60 -1.7 3,635,275 - CA264_15530 0.60 +0.2 3,635,275 - CA264_15530 0.60 -0.1 3,635,282 - CA264_15530 0.61 +0.1 3,635,292 + CA264_15530 0.63 -0.3 3,635,355 - CA264_15530 0.74 +0.1 3,635,484 + -0.5 3,635,485 - -0.0 3,635,489 - -0.4 3,635,522 + +0.6 3,635,523 - -0.5 3,635,524 + -0.2 3,635,525 - +0.2 3,635,539 + -0.7 3,635,539 + -1.4 3,635,539 + -0.3 3,635,540 - +0.9 3,635,541 + -0.5 3,635,541 + +1.2 3,635,544 + -0.2 3,635,544 + -0.7 3,635,544 + +0.5 3,635,545 - -0.5 3,635,545 - +0.7 3,635,615 - -0.3 3,635,615 - -1.0 3,635,622 + -0.3 3,635,623 - +1.2 3,635,635 + -0.4 3,635,746 - +0.8 3,635,835 + +0.1 3,635,858 + CA264_15535 0.11 +0.7 3,635,859 - CA264_15535 0.11 -0.1 3,636,004 + CA264_15535 0.17 +0.3 3,636,004 + CA264_15535 0.17 -1.4 3,636,154 + CA264_15535 0.24 +0.4 3,636,157 - CA264_15535 0.24 +0.6 3,636,157 - CA264_15535 0.24 -1.1 3,636,157 - CA264_15535 0.24 +0.9 3,636,202 - CA264_15535 0.26 +0.9 3,636,291 - CA264_15535 0.31 -1.1 3,636,322 + CA264_15535 0.32 +0.1 3,636,322 + CA264_15535 0.32 +0.4 3,636,322 + CA264_15535 0.32 +0.8 3,636,322 + CA264_15535 0.32 +1.6 3,636,322 + CA264_15535 0.32 +1.3 3,636,323 - CA264_15535 0.32 -0.4 3,636,323 - CA264_15535 0.32 +1.8 3,636,435 - CA264_15535 0.37 -0.2 3,636,495 - CA264_15535 0.40 -1.5
Or see this region's nucleotide sequence