Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_15530

Experiment: m.b. Chloride 750 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_15520 and CA264_15525 are separated by 117 nucleotidesCA264_15525 and CA264_15530 are separated by 25 nucleotidesCA264_15530 and CA264_15535 are separated by 121 nucleotides CA264_15520: CA264_15520 - hypothetical protein, at 3,633,945 to 3,634,130 _15520 CA264_15525: CA264_15525 - hypothetical protein, at 3,634,248 to 3,634,907 _15525 CA264_15530: CA264_15530 - hypothetical protein, at 3,634,933 to 3,635,505 _15530 CA264_15535: CA264_15535 - hypothetical protein, at 3,635,627 to 3,637,801 _15535 Position (kb) 3634 3635 3636Strain fitness (log2 ratio) -2 -1 0 1 2at 3634.037 kb on - strand, within CA264_15520at 3634.100 kb on + strand, within CA264_15520at 3634.101 kb on - strand, within CA264_15520at 3634.101 kb on - strand, within CA264_15520at 3634.101 kb on - strand, within CA264_15520at 3634.104 kb on + strand, within CA264_15520at 3634.104 kb on + strand, within CA264_15520at 3634.105 kb on - strand, within CA264_15520at 3634.108 kb on - strand, within CA264_15520at 3634.108 kb on - strand, within CA264_15520at 3634.151 kb on - strandat 3634.152 kb on + strandat 3634.152 kb on + strandat 3634.152 kb on + strandat 3634.152 kb on + strandat 3634.152 kb on + strandat 3634.152 kb on + strandat 3634.153 kb on - strandat 3634.183 kb on + strandat 3634.183 kb on + strandat 3634.183 kb on + strandat 3634.183 kb on + strandat 3634.185 kb on + strandat 3634.186 kb on - strandat 3634.195 kb on + strandat 3634.196 kb on - strandat 3634.196 kb on - strandat 3634.196 kb on - strandat 3634.198 kb on + strandat 3634.214 kb on + strandat 3634.214 kb on + strandat 3634.264 kb on - strandat 3634.265 kb on + strandat 3634.296 kb on + strandat 3634.315 kb on + strand, within CA264_15525at 3634.315 kb on + strand, within CA264_15525at 3634.316 kb on - strand, within CA264_15525at 3634.322 kb on + strand, within CA264_15525at 3634.369 kb on - strand, within CA264_15525at 3634.417 kb on + strand, within CA264_15525at 3634.466 kb on + strand, within CA264_15525at 3634.507 kb on + strand, within CA264_15525at 3634.528 kb on - strand, within CA264_15525at 3634.550 kb on + strand, within CA264_15525at 3634.551 kb on - strand, within CA264_15525at 3634.553 kb on + strand, within CA264_15525at 3634.554 kb on - strand, within CA264_15525at 3634.554 kb on - strand, within CA264_15525at 3634.554 kb on - strand, within CA264_15525at 3634.669 kb on - strand, within CA264_15525at 3634.677 kb on + strand, within CA264_15525at 3634.678 kb on - strand, within CA264_15525at 3634.788 kb on + strand, within CA264_15525at 3634.788 kb on + strand, within CA264_15525at 3634.788 kb on + strand, within CA264_15525at 3634.789 kb on - strand, within CA264_15525at 3634.789 kb on - strand, within CA264_15525at 3634.906 kb on - strandat 3635.100 kb on + strand, within CA264_15530at 3635.100 kb on + strand, within CA264_15530at 3635.218 kb on + strand, within CA264_15530at 3635.219 kb on - strand, within CA264_15530at 3635.237 kb on - strand, within CA264_15530at 3635.274 kb on + strand, within CA264_15530at 3635.275 kb on - strand, within CA264_15530at 3635.275 kb on - strand, within CA264_15530at 3635.275 kb on - strand, within CA264_15530at 3635.282 kb on - strand, within CA264_15530at 3635.292 kb on + strand, within CA264_15530at 3635.355 kb on - strand, within CA264_15530at 3635.484 kb on + strandat 3635.485 kb on - strandat 3635.489 kb on - strandat 3635.522 kb on + strandat 3635.523 kb on - strandat 3635.524 kb on + strandat 3635.525 kb on - strandat 3635.539 kb on + strandat 3635.539 kb on + strandat 3635.539 kb on + strandat 3635.540 kb on - strandat 3635.541 kb on + strandat 3635.541 kb on + strandat 3635.544 kb on + strandat 3635.544 kb on + strandat 3635.544 kb on + strandat 3635.545 kb on - strandat 3635.545 kb on - strandat 3635.615 kb on - strandat 3635.615 kb on - strandat 3635.622 kb on + strandat 3635.623 kb on - strandat 3635.635 kb on + strandat 3635.746 kb on - strandat 3635.835 kb on + strandat 3635.858 kb on + strand, within CA264_15535at 3635.859 kb on - strand, within CA264_15535at 3636.004 kb on + strand, within CA264_15535at 3636.004 kb on + strand, within CA264_15535at 3636.154 kb on + strand, within CA264_15535at 3636.157 kb on - strand, within CA264_15535at 3636.157 kb on - strand, within CA264_15535at 3636.157 kb on - strand, within CA264_15535at 3636.202 kb on - strand, within CA264_15535at 3636.291 kb on - strand, within CA264_15535at 3636.322 kb on + strand, within CA264_15535at 3636.322 kb on + strand, within CA264_15535at 3636.322 kb on + strand, within CA264_15535at 3636.322 kb on + strand, within CA264_15535at 3636.322 kb on + strand, within CA264_15535at 3636.323 kb on - strand, within CA264_15535at 3636.323 kb on - strand, within CA264_15535at 3636.435 kb on - strand, within CA264_15535at 3636.495 kb on - strand, within CA264_15535

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM
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3,634,037 - CA264_15520 0.49 +0.8
3,634,100 + CA264_15520 0.83 -1.6
3,634,101 - CA264_15520 0.84 -0.5
3,634,101 - CA264_15520 0.84 -1.0
3,634,101 - CA264_15520 0.84 -0.6
3,634,104 + CA264_15520 0.85 -1.3
3,634,104 + CA264_15520 0.85 -1.3
3,634,105 - CA264_15520 0.86 -1.7
3,634,108 - CA264_15520 0.88 -0.8
3,634,108 - CA264_15520 0.88 -0.2
3,634,151 - +0.1
3,634,152 + -1.2
3,634,152 + -1.3
3,634,152 + -1.2
3,634,152 + -0.2
3,634,152 + -0.2
3,634,152 + -0.1
3,634,153 - -0.5
3,634,183 + -0.9
3,634,183 + -0.6
3,634,183 + +0.7
3,634,183 + -0.5
3,634,185 + +0.9
3,634,186 - -0.3
3,634,195 + +1.1
3,634,196 - +0.0
3,634,196 - +1.4
3,634,196 - -0.2
3,634,198 + -1.9
3,634,214 + -0.6
3,634,214 + -0.8
3,634,264 - -0.8
3,634,265 + -0.3
3,634,296 + +0.3
3,634,315 + CA264_15525 0.10 -0.4
3,634,315 + CA264_15525 0.10 +0.1
3,634,316 - CA264_15525 0.10 +0.0
3,634,322 + CA264_15525 0.11 +0.3
3,634,369 - CA264_15525 0.18 -0.2
3,634,417 + CA264_15525 0.26 +0.2
3,634,466 + CA264_15525 0.33 +0.1
3,634,507 + CA264_15525 0.39 +1.6
3,634,528 - CA264_15525 0.42 -0.4
3,634,550 + CA264_15525 0.46 -0.0
3,634,551 - CA264_15525 0.46 +0.5
3,634,553 + CA264_15525 0.46 +0.8
3,634,554 - CA264_15525 0.46 +0.2
3,634,554 - CA264_15525 0.46 +0.2
3,634,554 - CA264_15525 0.46 +0.3
3,634,669 - CA264_15525 0.64 -0.2
3,634,677 + CA264_15525 0.65 +0.9
3,634,678 - CA264_15525 0.65 -0.5
3,634,788 + CA264_15525 0.82 -0.1
3,634,788 + CA264_15525 0.82 +0.1
3,634,788 + CA264_15525 0.82 +0.4
3,634,789 - CA264_15525 0.82 +1.3
3,634,789 - CA264_15525 0.82 -0.6
3,634,906 - +0.8
3,635,100 + CA264_15530 0.29 -0.0
3,635,100 + CA264_15530 0.29 -0.2
3,635,218 + CA264_15530 0.50 +1.2
3,635,219 - CA264_15530 0.50 -1.3
3,635,237 - CA264_15530 0.53 +0.6
3,635,274 + CA264_15530 0.60 -1.3
3,635,275 - CA264_15530 0.60 -1.7
3,635,275 - CA264_15530 0.60 +0.2
3,635,275 - CA264_15530 0.60 -0.1
3,635,282 - CA264_15530 0.61 +0.1
3,635,292 + CA264_15530 0.63 -0.3
3,635,355 - CA264_15530 0.74 +0.1
3,635,484 + -0.5
3,635,485 - -0.0
3,635,489 - -0.4
3,635,522 + +0.6
3,635,523 - -0.5
3,635,524 + -0.2
3,635,525 - +0.2
3,635,539 + -0.7
3,635,539 + -1.4
3,635,539 + -0.3
3,635,540 - +0.9
3,635,541 + -0.5
3,635,541 + +1.2
3,635,544 + -0.2
3,635,544 + -0.7
3,635,544 + +0.5
3,635,545 - -0.5
3,635,545 - +0.7
3,635,615 - -0.3
3,635,615 - -1.0
3,635,622 + -0.3
3,635,623 - +1.2
3,635,635 + -0.4
3,635,746 - +0.8
3,635,835 + +0.1
3,635,858 + CA264_15535 0.11 +0.7
3,635,859 - CA264_15535 0.11 -0.1
3,636,004 + CA264_15535 0.17 +0.3
3,636,004 + CA264_15535 0.17 -1.4
3,636,154 + CA264_15535 0.24 +0.4
3,636,157 - CA264_15535 0.24 +0.6
3,636,157 - CA264_15535 0.24 -1.1
3,636,157 - CA264_15535 0.24 +0.9
3,636,202 - CA264_15535 0.26 +0.9
3,636,291 - CA264_15535 0.31 -1.1
3,636,322 + CA264_15535 0.32 +0.1
3,636,322 + CA264_15535 0.32 +0.4
3,636,322 + CA264_15535 0.32 +0.8
3,636,322 + CA264_15535 0.32 +1.6
3,636,322 + CA264_15535 0.32 +1.3
3,636,323 - CA264_15535 0.32 -0.4
3,636,323 - CA264_15535 0.32 +1.8
3,636,435 - CA264_15535 0.37 -0.2
3,636,495 - CA264_15535 0.40 -1.5

Or see this region's nucleotide sequence