Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15030 and CA264_15035 are separated by 153 nucleotides CA264_15035 and CA264_15040 are separated by 59 nucleotides CA264_15040 and CA264_15045 are separated by 37 nucleotides
CA264_15030: CA264_15030 - hypothetical protein, at 3,527,568 to 3,529,022
_15030
CA264_15035: CA264_15035 - acyl-CoA dehydrogenase, at 3,529,176 to 3,530,966
_15035
CA264_15040: CA264_15040 - four helix bundle protein, at 3,531,026 to 3,531,385
_15040
CA264_15045: CA264_15045 - acetyl-CoA acetyltransferase, at 3,531,423 to 3,532,601
_15045
Position (kb)
3529
3530
3531 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3528.207 kb on + strand, within CA264_15030 at 3528.207 kb on + strand, within CA264_15030 at 3528.208 kb on - strand, within CA264_15030 at 3528.211 kb on + strand, within CA264_15030 at 3528.211 kb on + strand, within CA264_15030 at 3528.211 kb on + strand, within CA264_15030 at 3528.211 kb on + strand, within CA264_15030 at 3528.211 kb on + strand, within CA264_15030 at 3528.212 kb on - strand, within CA264_15030 at 3528.257 kb on + strand, within CA264_15030 at 3528.283 kb on + strand, within CA264_15030 at 3528.284 kb on - strand, within CA264_15030 at 3528.518 kb on + strand, within CA264_15030 at 3528.542 kb on - strand, within CA264_15030 at 3528.542 kb on - strand, within CA264_15030 at 3528.553 kb on - strand, within CA264_15030 at 3528.766 kb on - strand, within CA264_15030 at 3528.795 kb on - strand, within CA264_15030 at 3528.809 kb on - strand, within CA264_15030 at 3528.819 kb on + strand, within CA264_15030 at 3528.820 kb on - strand, within CA264_15030 at 3528.828 kb on + strand, within CA264_15030 at 3528.851 kb on + strand, within CA264_15030 at 3528.864 kb on - strand, within CA264_15030 at 3528.872 kb on + strand, within CA264_15030 at 3528.903 kb on - strand at 3528.915 kb on + strand at 3529.001 kb on - strand at 3529.001 kb on - strand at 3529.016 kb on + strand at 3529.021 kb on - strand at 3529.030 kb on + strand at 3529.144 kb on - strand at 3529.156 kb on + strand at 3529.160 kb on + strand at 3529.162 kb on + strand at 3529.163 kb on - strand at 3529.186 kb on + strand at 3529.317 kb on + strand at 3529.318 kb on - strand at 3529.363 kb on - strand, within CA264_15035 at 3529.369 kb on - strand, within CA264_15035 at 3529.415 kb on + strand, within CA264_15035 at 3529.420 kb on - strand, within CA264_15035 at 3529.431 kb on + strand, within CA264_15035 at 3529.459 kb on + strand, within CA264_15035 at 3529.460 kb on - strand, within CA264_15035 at 3529.523 kb on + strand, within CA264_15035 at 3529.526 kb on - strand, within CA264_15035 at 3529.526 kb on - strand, within CA264_15035 at 3529.727 kb on + strand, within CA264_15035 at 3529.727 kb on + strand, within CA264_15035 at 3529.728 kb on - strand, within CA264_15035 at 3529.728 kb on - strand, within CA264_15035 at 3529.799 kb on - strand, within CA264_15035 at 3529.852 kb on + strand, within CA264_15035 at 3529.852 kb on + strand, within CA264_15035 at 3529.853 kb on - strand, within CA264_15035 at 3529.876 kb on - strand, within CA264_15035 at 3529.975 kb on + strand, within CA264_15035 at 3529.980 kb on - strand, within CA264_15035 at 3529.996 kb on + strand, within CA264_15035 at 3530.018 kb on - strand, within CA264_15035 at 3530.048 kb on - strand, within CA264_15035 at 3530.051 kb on + strand, within CA264_15035 at 3530.081 kb on + strand, within CA264_15035 at 3530.104 kb on + strand, within CA264_15035 at 3530.105 kb on - strand, within CA264_15035 at 3530.147 kb on + strand, within CA264_15035 at 3530.148 kb on - strand, within CA264_15035 at 3530.166 kb on - strand, within CA264_15035 at 3530.343 kb on - strand, within CA264_15035 at 3530.352 kb on - strand, within CA264_15035 at 3530.367 kb on + strand, within CA264_15035 at 3530.440 kb on + strand, within CA264_15035 at 3530.440 kb on + strand, within CA264_15035 at 3530.441 kb on - strand, within CA264_15035 at 3530.441 kb on - strand, within CA264_15035 at 3530.522 kb on - strand, within CA264_15035 at 3530.560 kb on + strand, within CA264_15035 at 3530.606 kb on + strand, within CA264_15035 at 3530.607 kb on - strand, within CA264_15035 at 3530.619 kb on - strand, within CA264_15035 at 3530.687 kb on + strand, within CA264_15035 at 3530.710 kb on + strand, within CA264_15035 at 3530.840 kb on + strand at 3530.886 kb on + strand at 3530.887 kb on - strand at 3530.892 kb on + strand at 3530.893 kb on - strand at 3530.970 kb on + strand at 3530.970 kb on + strand at 3530.980 kb on + strand at 3530.988 kb on - strand at 3531.000 kb on + strand at 3531.001 kb on - strand at 3531.028 kb on - strand at 3531.028 kb on - strand at 3531.028 kb on - strand at 3531.037 kb on + strand at 3531.037 kb on + strand at 3531.095 kb on + strand, within CA264_15040 at 3531.095 kb on + strand, within CA264_15040 at 3531.105 kb on - strand, within CA264_15040 at 3531.269 kb on + strand, within CA264_15040 at 3531.281 kb on - strand, within CA264_15040 at 3531.281 kb on - strand, within CA264_15040 at 3531.324 kb on + strand, within CA264_15040 at 3531.324 kb on + strand, within CA264_15040 at 3531.324 kb on + strand, within CA264_15040 at 3531.324 kb on + strand, within CA264_15040 at 3531.324 kb on + strand, within CA264_15040 at 3531.326 kb on + strand, within CA264_15040 at 3531.327 kb on - strand, within CA264_15040 at 3531.338 kb on + strand, within CA264_15040 at 3531.405 kb on - strand at 3531.480 kb on + strand at 3531.481 kb on - strand at 3531.778 kb on - strand, within CA264_15045 at 3531.882 kb on + strand, within CA264_15045 at 3531.888 kb on - strand, within CA264_15045 at 3531.888 kb on - strand, within CA264_15045
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 3,528,207 + CA264_15030 0.44 +0.4 3,528,207 + CA264_15030 0.44 +2.7 3,528,208 - CA264_15030 0.44 -0.3 3,528,211 + CA264_15030 0.44 +1.6 3,528,211 + CA264_15030 0.44 -0.3 3,528,211 + CA264_15030 0.44 +0.0 3,528,211 + CA264_15030 0.44 -1.1 3,528,211 + CA264_15030 0.44 +0.0 3,528,212 - CA264_15030 0.44 -0.2 3,528,257 + CA264_15030 0.47 -0.5 3,528,283 + CA264_15030 0.49 +0.1 3,528,284 - CA264_15030 0.49 -1.2 3,528,518 + CA264_15030 0.65 +0.5 3,528,542 - CA264_15030 0.67 +0.1 3,528,542 - CA264_15030 0.67 +0.7 3,528,553 - CA264_15030 0.68 -1.1 3,528,766 - CA264_15030 0.82 -0.0 3,528,795 - CA264_15030 0.84 +0.1 3,528,809 - CA264_15030 0.85 +0.3 3,528,819 + CA264_15030 0.86 -0.8 3,528,820 - CA264_15030 0.86 +0.6 3,528,828 + CA264_15030 0.87 +0.8 3,528,851 + CA264_15030 0.88 -0.6 3,528,864 - CA264_15030 0.89 -1.3 3,528,872 + CA264_15030 0.90 -1.3 3,528,903 - -1.4 3,528,915 + +0.9 3,529,001 - +0.1 3,529,001 - +0.3 3,529,016 + -0.4 3,529,021 - -0.4 3,529,030 + -0.1 3,529,144 - -0.1 3,529,156 + +0.6 3,529,160 + +0.3 3,529,162 + -0.3 3,529,163 - -0.2 3,529,186 + -1.4 3,529,317 + -0.4 3,529,318 - -0.9 3,529,363 - CA264_15035 0.10 -1.5 3,529,369 - CA264_15035 0.11 -1.5 3,529,415 + CA264_15035 0.13 +0.1 3,529,420 - CA264_15035 0.14 -0.5 3,529,431 + CA264_15035 0.14 -1.6 3,529,459 + CA264_15035 0.16 -0.3 3,529,460 - CA264_15035 0.16 -1.9 3,529,523 + CA264_15035 0.19 -1.1 3,529,526 - CA264_15035 0.20 -1.8 3,529,526 - CA264_15035 0.20 +0.3 3,529,727 + CA264_15035 0.31 -0.6 3,529,727 + CA264_15035 0.31 -0.4 3,529,728 - CA264_15035 0.31 -0.2 3,529,728 - CA264_15035 0.31 -2.0 3,529,799 - CA264_15035 0.35 -1.4 3,529,852 + CA264_15035 0.38 -0.1 3,529,852 + CA264_15035 0.38 +0.4 3,529,853 - CA264_15035 0.38 -0.5 3,529,876 - CA264_15035 0.39 -0.5 3,529,975 + CA264_15035 0.45 -1.4 3,529,980 - CA264_15035 0.45 -2.4 3,529,996 + CA264_15035 0.46 -0.7 3,530,018 - CA264_15035 0.47 -1.4 3,530,048 - CA264_15035 0.49 -1.1 3,530,051 + CA264_15035 0.49 +0.6 3,530,081 + CA264_15035 0.51 -0.6 3,530,104 + CA264_15035 0.52 -0.5 3,530,105 - CA264_15035 0.52 -0.4 3,530,147 + CA264_15035 0.54 -1.3 3,530,148 - CA264_15035 0.54 -0.8 3,530,166 - CA264_15035 0.55 -0.7 3,530,343 - CA264_15035 0.65 -1.1 3,530,352 - CA264_15035 0.66 -1.3 3,530,367 + CA264_15035 0.66 -2.0 3,530,440 + CA264_15035 0.71 -2.4 3,530,440 + CA264_15035 0.71 +0.1 3,530,441 - CA264_15035 0.71 -0.1 3,530,441 - CA264_15035 0.71 -0.0 3,530,522 - CA264_15035 0.75 -0.1 3,530,560 + CA264_15035 0.77 +0.5 3,530,606 + CA264_15035 0.80 +0.9 3,530,607 - CA264_15035 0.80 -0.9 3,530,619 - CA264_15035 0.81 -0.6 3,530,687 + CA264_15035 0.84 -0.7 3,530,710 + CA264_15035 0.86 -1.2 3,530,840 + -0.7 3,530,886 + -0.3 3,530,887 - -1.0 3,530,892 + -1.5 3,530,893 - -1.3 3,530,970 + -0.4 3,530,970 + -0.5 3,530,980 + +0.1 3,530,988 - -2.9 3,531,000 + -1.4 3,531,001 - -0.1 3,531,028 - -1.3 3,531,028 - -0.7 3,531,028 - -0.9 3,531,037 + +0.2 3,531,037 + -1.2 3,531,095 + CA264_15040 0.19 -0.4 3,531,095 + CA264_15040 0.19 +0.0 3,531,105 - CA264_15040 0.22 -1.2 3,531,269 + CA264_15040 0.68 -0.8 3,531,281 - CA264_15040 0.71 -0.7 3,531,281 - CA264_15040 0.71 +0.3 3,531,324 + CA264_15040 0.83 -0.2 3,531,324 + CA264_15040 0.83 +0.8 3,531,324 + CA264_15040 0.83 -1.3 3,531,324 + CA264_15040 0.83 +0.6 3,531,324 + CA264_15040 0.83 -0.9 3,531,326 + CA264_15040 0.83 -0.2 3,531,327 - CA264_15040 0.84 +0.1 3,531,338 + CA264_15040 0.87 -0.3 3,531,405 - -0.9 3,531,480 + -2.2 3,531,481 - -0.8 3,531,778 - CA264_15045 0.30 -1.6 3,531,882 + CA264_15045 0.39 -0.7 3,531,888 - CA264_15045 0.39 -2.7 3,531,888 - CA264_15045 0.39 -1.4
Or see this region's nucleotide sequence