Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14880 and CA264_14885 are separated by 8 nucleotides CA264_14885 and CA264_14890 are separated by 90 nucleotides CA264_14890 and CA264_14895 are separated by 170 nucleotides
CA264_14880: CA264_14880 - 50S ribosomal protein L11 methyltransferase, at 3,497,785 to 3,498,612
_14880
CA264_14885: CA264_14885 - hypothetical protein, at 3,498,621 to 3,498,980
_14885
CA264_14890: CA264_14890 - triose-phosphate isomerase, at 3,499,071 to 3,499,832
_14890
CA264_14895: CA264_14895 - hypothetical protein, at 3,500,003 to 3,500,206
_14895
Position (kb)
3499
3500 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3498.416 kb on + strand, within CA264_14880 at 3498.421 kb on + strand, within CA264_14880 at 3498.422 kb on - strand, within CA264_14880 at 3498.475 kb on - strand, within CA264_14880 at 3498.475 kb on - strand, within CA264_14880 at 3498.477 kb on - strand, within CA264_14880 at 3498.477 kb on - strand, within CA264_14880 at 3498.477 kb on - strand, within CA264_14880 at 3498.495 kb on - strand, within CA264_14880 at 3498.583 kb on + strand at 3498.583 kb on + strand at 3498.583 kb on + strand at 3498.595 kb on + strand at 3498.604 kb on - strand at 3498.615 kb on + strand at 3498.616 kb on - strand at 3498.616 kb on - strand at 3498.696 kb on + strand, within CA264_14885 at 3498.696 kb on + strand, within CA264_14885 at 3498.701 kb on - strand, within CA264_14885 at 3498.701 kb on - strand, within CA264_14885 at 3498.728 kb on + strand, within CA264_14885 at 3498.850 kb on + strand, within CA264_14885 at 3498.970 kb on - strand at 3498.973 kb on - strand at 3498.980 kb on + strand at 3498.982 kb on + strand at 3499.057 kb on + strand at 3499.062 kb on + strand at 3499.335 kb on + strand, within CA264_14890 at 3499.653 kb on - strand, within CA264_14890 at 3499.838 kb on - strand at 3499.840 kb on + strand at 3499.840 kb on - strand at 3499.859 kb on + strand at 3499.859 kb on + strand at 3499.860 kb on - strand at 3499.861 kb on + strand at 3499.898 kb on + strand at 3499.898 kb on + strand at 3499.899 kb on - strand at 3499.913 kb on + strand at 3499.914 kb on - strand at 3499.914 kb on - strand at 3499.928 kb on - strand at 3499.946 kb on - strand at 3499.996 kb on + strand at 3499.996 kb on + strand at 3500.004 kb on + strand at 3500.040 kb on + strand, within CA264_14895 at 3500.214 kb on + strand at 3500.228 kb on + strand at 3500.272 kb on + strand at 3500.273 kb on - strand at 3500.274 kb on + strand at 3500.275 kb on - strand at 3500.286 kb on + strand at 3500.286 kb on + strand at 3500.293 kb on + strand at 3500.299 kb on - strand at 3500.313 kb on + strand at 3500.314 kb on - strand at 3500.314 kb on - strand at 3500.329 kb on - strand at 3500.359 kb on + strand at 3500.359 kb on + strand at 3500.360 kb on - strand at 3500.360 kb on - strand at 3500.420 kb on - strand at 3500.430 kb on + strand at 3500.434 kb on + strand at 3500.434 kb on + strand at 3500.435 kb on - strand at 3500.435 kb on - strand at 3500.440 kb on + strand at 3500.479 kb on - strand at 3500.484 kb on - strand at 3500.500 kb on + strand at 3500.501 kb on - strand at 3500.501 kb on - strand at 3500.501 kb on - strand at 3500.501 kb on - strand at 3500.505 kb on + strand at 3500.532 kb on + strand at 3500.532 kb on + strand at 3500.532 kb on + strand at 3500.533 kb on - strand at 3500.533 kb on - strand at 3500.533 kb on - strand at 3500.533 kb on - strand at 3500.533 kb on - strand at 3500.548 kb on - strand at 3500.573 kb on - strand at 3500.578 kb on - strand at 3500.622 kb on + strand at 3500.622 kb on + strand at 3500.650 kb on + strand at 3500.654 kb on + strand at 3500.663 kb on - strand at 3500.673 kb on - strand at 3500.677 kb on + strand at 3500.677 kb on + strand at 3500.752 kb on + strand at 3500.753 kb on - strand at 3500.773 kb on - strand at 3500.782 kb on + strand at 3500.805 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 3,498,416 + CA264_14880 0.76 -0.1 3,498,421 + CA264_14880 0.77 +0.1 3,498,422 - CA264_14880 0.77 +0.7 3,498,475 - CA264_14880 0.83 -1.3 3,498,475 - CA264_14880 0.83 +0.7 3,498,477 - CA264_14880 0.84 +0.1 3,498,477 - CA264_14880 0.84 +0.8 3,498,477 - CA264_14880 0.84 +0.2 3,498,495 - CA264_14880 0.86 +1.0 3,498,583 + +1.5 3,498,583 + -2.5 3,498,583 + +1.0 3,498,595 + -0.7 3,498,604 - +0.0 3,498,615 + +0.4 3,498,616 - +0.8 3,498,616 - +0.7 3,498,696 + CA264_14885 0.21 -0.2 3,498,696 + CA264_14885 0.21 +0.6 3,498,701 - CA264_14885 0.22 -0.5 3,498,701 - CA264_14885 0.22 -1.5 3,498,728 + CA264_14885 0.30 +0.8 3,498,850 + CA264_14885 0.64 -1.5 3,498,970 - -0.0 3,498,973 - -1.1 3,498,980 + -0.3 3,498,982 + +0.0 3,499,057 + -1.4 3,499,062 + -0.6 3,499,335 + CA264_14890 0.35 -2.9 3,499,653 - CA264_14890 0.76 -4.4 3,499,838 - -0.5 3,499,840 + -0.0 3,499,840 - -0.1 3,499,859 + -0.4 3,499,859 + -0.4 3,499,860 - -0.4 3,499,861 + +0.0 3,499,898 + +1.3 3,499,898 + +0.7 3,499,899 - -0.3 3,499,913 + -2.7 3,499,914 - +0.4 3,499,914 - -1.3 3,499,928 - -0.2 3,499,946 - -0.5 3,499,996 + +0.6 3,499,996 + +0.1 3,500,004 + -0.1 3,500,040 + CA264_14895 0.18 +0.4 3,500,214 + +0.5 3,500,228 + +0.5 3,500,272 + -0.0 3,500,273 - -0.2 3,500,274 + -0.2 3,500,275 - +0.0 3,500,286 + +0.7 3,500,286 + -1.0 3,500,293 + +0.0 3,500,299 - +1.3 3,500,313 + +1.1 3,500,314 - +0.4 3,500,314 - +1.6 3,500,329 - -1.9 3,500,359 + +0.3 3,500,359 + +0.1 3,500,360 - +0.0 3,500,360 - -0.0 3,500,420 - +1.1 3,500,430 + +0.2 3,500,434 + -2.1 3,500,434 + +0.4 3,500,435 - +0.1 3,500,435 - +0.2 3,500,440 + -0.2 3,500,479 - +0.9 3,500,484 - +0.2 3,500,500 + +1.2 3,500,501 - +0.3 3,500,501 - -0.2 3,500,501 - -0.8 3,500,501 - +0.1 3,500,505 + -0.7 3,500,532 + -0.7 3,500,532 + +0.1 3,500,532 + -0.1 3,500,533 - -0.2 3,500,533 - +0.1 3,500,533 - +0.0 3,500,533 - -0.1 3,500,533 - -2.2 3,500,548 - -0.5 3,500,573 - -0.2 3,500,578 - -0.0 3,500,622 + -0.2 3,500,622 + -0.1 3,500,650 + +0.2 3,500,654 + -0.6 3,500,663 - +0.5 3,500,673 - +0.8 3,500,677 + +0.1 3,500,677 + +0.3 3,500,752 + +0.2 3,500,753 - +1.7 3,500,773 - -0.6 3,500,782 + +0.7 3,500,805 - +0.1
Or see this region's nucleotide sequence