Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14040 and CA264_14045 are separated by 147 nucleotides CA264_14045 and CA264_14050 are separated by 42 nucleotides
CA264_14040: CA264_14040 - peptidase S41, at 3,287,985 to 3,289,433
_14040
CA264_14045: CA264_14045 - hypothetical protein, at 3,289,581 to 3,290,990
_14045
CA264_14050: CA264_14050 - hypothetical protein, at 3,291,033 to 3,293,399
_14050
Position (kb)
3289
3290
3291 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3288.603 kb on + strand, within CA264_14040 at 3288.674 kb on + strand, within CA264_14040 at 3288.674 kb on + strand, within CA264_14040 at 3288.680 kb on - strand, within CA264_14040 at 3288.727 kb on - strand, within CA264_14040 at 3288.956 kb on + strand, within CA264_14040 at 3288.967 kb on + strand, within CA264_14040 at 3289.000 kb on + strand, within CA264_14040 at 3289.000 kb on + strand, within CA264_14040 at 3289.018 kb on - strand, within CA264_14040 at 3289.018 kb on - strand, within CA264_14040 at 3289.054 kb on + strand, within CA264_14040 at 3289.078 kb on - strand, within CA264_14040 at 3289.078 kb on - strand, within CA264_14040 at 3289.097 kb on + strand, within CA264_14040 at 3289.161 kb on - strand, within CA264_14040 at 3289.192 kb on + strand, within CA264_14040 at 3289.192 kb on + strand, within CA264_14040 at 3289.193 kb on - strand, within CA264_14040 at 3289.195 kb on - strand, within CA264_14040 at 3289.199 kb on + strand, within CA264_14040 at 3289.234 kb on - strand, within CA264_14040 at 3289.256 kb on + strand, within CA264_14040 at 3289.349 kb on + strand at 3289.349 kb on + strand at 3289.401 kb on + strand at 3289.402 kb on - strand at 3289.402 kb on - strand at 3289.493 kb on - strand at 3289.493 kb on - strand at 3289.507 kb on - strand at 3289.521 kb on + strand at 3289.522 kb on - strand at 3289.553 kb on - strand at 3289.582 kb on + strand at 3289.583 kb on - strand at 3289.584 kb on + strand at 3289.627 kb on + strand at 3289.628 kb on - strand at 3289.664 kb on - strand at 3289.775 kb on + strand, within CA264_14045 at 3289.776 kb on - strand, within CA264_14045 at 3289.786 kb on + strand, within CA264_14045 at 3289.813 kb on + strand, within CA264_14045 at 3289.814 kb on - strand, within CA264_14045 at 3289.831 kb on + strand, within CA264_14045 at 3289.832 kb on - strand, within CA264_14045 at 3289.844 kb on - strand, within CA264_14045 at 3289.860 kb on + strand, within CA264_14045 at 3289.860 kb on + strand, within CA264_14045 at 3289.915 kb on + strand, within CA264_14045 at 3290.001 kb on - strand, within CA264_14045 at 3290.002 kb on + strand, within CA264_14045 at 3290.002 kb on + strand, within CA264_14045 at 3290.006 kb on + strand, within CA264_14045 at 3290.007 kb on - strand, within CA264_14045 at 3290.057 kb on + strand, within CA264_14045 at 3290.092 kb on - strand, within CA264_14045 at 3290.108 kb on + strand, within CA264_14045 at 3290.109 kb on - strand, within CA264_14045 at 3290.117 kb on - strand, within CA264_14045 at 3290.135 kb on + strand, within CA264_14045 at 3290.189 kb on - strand, within CA264_14045 at 3290.207 kb on + strand, within CA264_14045 at 3290.210 kb on - strand, within CA264_14045 at 3290.212 kb on + strand, within CA264_14045 at 3290.286 kb on + strand, within CA264_14045 at 3290.286 kb on + strand, within CA264_14045 at 3290.287 kb on - strand, within CA264_14045 at 3290.287 kb on - strand, within CA264_14045 at 3290.287 kb on - strand, within CA264_14045 at 3290.287 kb on - strand, within CA264_14045 at 3290.395 kb on + strand, within CA264_14045 at 3290.398 kb on + strand, within CA264_14045 at 3290.399 kb on - strand, within CA264_14045 at 3290.408 kb on - strand, within CA264_14045 at 3290.473 kb on + strand, within CA264_14045 at 3290.503 kb on + strand, within CA264_14045 at 3290.507 kb on - strand, within CA264_14045 at 3290.523 kb on + strand, within CA264_14045 at 3290.523 kb on + strand, within CA264_14045 at 3290.548 kb on - strand, within CA264_14045 at 3290.632 kb on + strand, within CA264_14045 at 3290.632 kb on + strand, within CA264_14045 at 3290.632 kb on + strand, within CA264_14045 at 3290.632 kb on + strand, within CA264_14045 at 3290.632 kb on + strand, within CA264_14045 at 3290.633 kb on - strand, within CA264_14045 at 3290.633 kb on - strand, within CA264_14045 at 3290.633 kb on - strand, within CA264_14045 at 3290.711 kb on - strand, within CA264_14045 at 3290.871 kb on + strand at 3290.871 kb on + strand at 3290.872 kb on - strand at 3290.875 kb on + strand at 3290.875 kb on + strand at 3290.876 kb on - strand at 3290.876 kb on - strand at 3290.879 kb on + strand at 3290.880 kb on - strand at 3290.880 kb on - strand at 3290.928 kb on + strand at 3290.928 kb on + strand at 3290.929 kb on - strand at 3290.929 kb on - strand at 3290.951 kb on + strand at 3290.975 kb on + strand at 3291.014 kb on + strand at 3291.154 kb on - strand at 3291.195 kb on - strand at 3291.195 kb on - strand at 3291.200 kb on - strand at 3291.268 kb on + strand at 3291.269 kb on - strand at 3291.297 kb on + strand, within CA264_14050 at 3291.298 kb on - strand, within CA264_14050 at 3291.343 kb on - strand, within CA264_14050 at 3291.374 kb on + strand, within CA264_14050 at 3291.397 kb on + strand, within CA264_14050 at 3291.434 kb on - strand, within CA264_14050 at 3291.466 kb on + strand, within CA264_14050 at 3291.568 kb on - strand, within CA264_14050 at 3291.648 kb on + strand, within CA264_14050 at 3291.649 kb on - strand, within CA264_14050 at 3291.678 kb on - strand, within CA264_14050 at 3291.691 kb on - strand, within CA264_14050 at 3291.832 kb on - strand, within CA264_14050 at 3291.979 kb on + strand, within CA264_14050
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 3,288,603 + CA264_14040 0.43 -0.5 3,288,674 + CA264_14040 0.48 -0.2 3,288,674 + CA264_14040 0.48 -0.6 3,288,680 - CA264_14040 0.48 +0.8 3,288,727 - CA264_14040 0.51 -1.2 3,288,956 + CA264_14040 0.67 -0.1 3,288,967 + CA264_14040 0.68 +0.2 3,289,000 + CA264_14040 0.70 -0.0 3,289,000 + CA264_14040 0.70 -0.3 3,289,018 - CA264_14040 0.71 +0.3 3,289,018 - CA264_14040 0.71 +0.7 3,289,054 + CA264_14040 0.74 +0.5 3,289,078 - CA264_14040 0.75 +0.8 3,289,078 - CA264_14040 0.75 +0.4 3,289,097 + CA264_14040 0.77 +0.3 3,289,161 - CA264_14040 0.81 -0.1 3,289,192 + CA264_14040 0.83 -0.5 3,289,192 + CA264_14040 0.83 -1.3 3,289,193 - CA264_14040 0.83 -1.2 3,289,195 - CA264_14040 0.84 -0.1 3,289,199 + CA264_14040 0.84 -1.2 3,289,234 - CA264_14040 0.86 +0.6 3,289,256 + CA264_14040 0.88 +1.7 3,289,349 + -0.7 3,289,349 + +0.7 3,289,401 + +0.0 3,289,402 - -0.0 3,289,402 - -0.2 3,289,493 - -1.1 3,289,493 - -1.3 3,289,507 - -0.5 3,289,521 + -0.1 3,289,522 - -2.0 3,289,553 - -1.3 3,289,582 + -0.3 3,289,583 - -0.9 3,289,584 + -0.1 3,289,627 + +0.3 3,289,628 - -0.0 3,289,664 - +0.3 3,289,775 + CA264_14045 0.14 -0.6 3,289,776 - CA264_14045 0.14 -0.1 3,289,786 + CA264_14045 0.15 -0.6 3,289,813 + CA264_14045 0.16 +0.8 3,289,814 - CA264_14045 0.17 +0.1 3,289,831 + CA264_14045 0.18 -0.4 3,289,832 - CA264_14045 0.18 -0.1 3,289,844 - CA264_14045 0.19 +1.4 3,289,860 + CA264_14045 0.20 +1.1 3,289,860 + CA264_14045 0.20 -1.1 3,289,915 + CA264_14045 0.24 -0.3 3,290,001 - CA264_14045 0.30 -0.1 3,290,002 + CA264_14045 0.30 -0.2 3,290,002 + CA264_14045 0.30 -0.5 3,290,006 + CA264_14045 0.30 -0.1 3,290,007 - CA264_14045 0.30 +0.0 3,290,057 + CA264_14045 0.34 +0.1 3,290,092 - CA264_14045 0.36 -1.3 3,290,108 + CA264_14045 0.37 -0.6 3,290,109 - CA264_14045 0.37 +0.2 3,290,117 - CA264_14045 0.38 +0.8 3,290,135 + CA264_14045 0.39 +1.1 3,290,189 - CA264_14045 0.43 +0.3 3,290,207 + CA264_14045 0.44 +0.1 3,290,210 - CA264_14045 0.45 +0.1 3,290,212 + CA264_14045 0.45 -0.2 3,290,286 + CA264_14045 0.50 +1.2 3,290,286 + CA264_14045 0.50 +0.5 3,290,287 - CA264_14045 0.50 +0.2 3,290,287 - CA264_14045 0.50 +0.1 3,290,287 - CA264_14045 0.50 -1.4 3,290,287 - CA264_14045 0.50 -0.3 3,290,395 + CA264_14045 0.58 -0.4 3,290,398 + CA264_14045 0.58 +0.6 3,290,399 - CA264_14045 0.58 -2.2 3,290,408 - CA264_14045 0.59 -0.3 3,290,473 + CA264_14045 0.63 -0.3 3,290,503 + CA264_14045 0.65 -0.1 3,290,507 - CA264_14045 0.66 -0.6 3,290,523 + CA264_14045 0.67 -0.5 3,290,523 + CA264_14045 0.67 -1.7 3,290,548 - CA264_14045 0.69 -0.5 3,290,632 + CA264_14045 0.75 -0.5 3,290,632 + CA264_14045 0.75 -1.9 3,290,632 + CA264_14045 0.75 -0.7 3,290,632 + CA264_14045 0.75 -0.5 3,290,632 + CA264_14045 0.75 -0.8 3,290,633 - CA264_14045 0.75 -0.4 3,290,633 - CA264_14045 0.75 +0.1 3,290,633 - CA264_14045 0.75 -0.7 3,290,711 - CA264_14045 0.80 -0.5 3,290,871 + -1.0 3,290,871 + -0.3 3,290,872 - +1.8 3,290,875 + +0.1 3,290,875 + -1.1 3,290,876 - +0.8 3,290,876 - -1.4 3,290,879 + +2.0 3,290,880 - +0.2 3,290,880 - -0.9 3,290,928 + -0.9 3,290,928 + +0.4 3,290,929 - -1.7 3,290,929 - +0.1 3,290,951 + +0.7 3,290,975 + -0.1 3,291,014 + +0.4 3,291,154 - +0.2 3,291,195 - -0.9 3,291,195 - -0.9 3,291,200 - -0.7 3,291,268 + -0.6 3,291,269 - -0.9 3,291,297 + CA264_14050 0.11 +0.1 3,291,298 - CA264_14050 0.11 -0.6 3,291,343 - CA264_14050 0.13 +0.7 3,291,374 + CA264_14050 0.14 -1.7 3,291,397 + CA264_14050 0.15 +0.4 3,291,434 - CA264_14050 0.17 -0.4 3,291,466 + CA264_14050 0.18 +0.0 3,291,568 - CA264_14050 0.23 -0.4 3,291,648 + CA264_14050 0.26 +0.1 3,291,649 - CA264_14050 0.26 +0.7 3,291,678 - CA264_14050 0.27 -0.1 3,291,691 - CA264_14050 0.28 -0.9 3,291,832 - CA264_14050 0.34 +0.7 3,291,979 + CA264_14050 0.40 -0.3
Or see this region's nucleotide sequence