Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13900 and CA264_13905 overlap by 4 nucleotides CA264_13905 and CA264_13910 are separated by 97 nucleotides CA264_13910 and CA264_13915 are separated by 11 nucleotides
CA264_13900: CA264_13900 - transcriptional regulator, at 3,244,190 to 3,245,251
_13900
CA264_13905: CA264_13905 - hybrid sensor histidine kinase/response regulator, at 3,245,248 to 3,246,480
_13905
CA264_13910: CA264_13910 - response regulator, at 3,246,578 to 3,247,027
_13910
CA264_13915: CA264_13915 - PAS domain-containing sensor histidine kinase, at 3,247,039 to 3,248,583
_13915
Position (kb)
3245
3246
3247 Strain fitness (log2 ratio)
-2
-1
0
1 at 3244.321 kb on + strand, within CA264_13900 at 3244.355 kb on - strand, within CA264_13900 at 3244.431 kb on + strand, within CA264_13900 at 3244.432 kb on - strand, within CA264_13900 at 3244.549 kb on + strand, within CA264_13900 at 3244.549 kb on + strand, within CA264_13900 at 3244.550 kb on - strand, within CA264_13900 at 3244.550 kb on - strand, within CA264_13900 at 3244.554 kb on + strand, within CA264_13900 at 3244.557 kb on - strand, within CA264_13900 at 3244.557 kb on - strand, within CA264_13900 at 3244.594 kb on - strand, within CA264_13900 at 3244.621 kb on - strand, within CA264_13900 at 3244.655 kb on + strand, within CA264_13900 at 3244.656 kb on - strand, within CA264_13900 at 3244.716 kb on + strand, within CA264_13900 at 3244.816 kb on - strand, within CA264_13900 at 3245.176 kb on - strand at 3245.338 kb on + strand at 3245.338 kb on + strand at 3245.339 kb on - strand at 3245.343 kb on - strand at 3245.356 kb on - strand at 3245.491 kb on + strand, within CA264_13905 at 3245.491 kb on + strand, within CA264_13905 at 3245.493 kb on + strand, within CA264_13905 at 3245.494 kb on - strand, within CA264_13905 at 3245.494 kb on - strand, within CA264_13905 at 3245.563 kb on + strand, within CA264_13905 at 3245.622 kb on - strand, within CA264_13905 at 3245.649 kb on - strand, within CA264_13905 at 3245.649 kb on - strand, within CA264_13905 at 3245.714 kb on + strand, within CA264_13905 at 3245.714 kb on + strand, within CA264_13905 at 3245.714 kb on + strand, within CA264_13905 at 3245.715 kb on - strand, within CA264_13905 at 3245.761 kb on + strand, within CA264_13905 at 3245.761 kb on + strand, within CA264_13905 at 3245.762 kb on - strand, within CA264_13905 at 3245.838 kb on + strand, within CA264_13905 at 3246.318 kb on - strand, within CA264_13905 at 3246.386 kb on + strand at 3246.431 kb on + strand at 3246.431 kb on + strand at 3246.432 kb on - strand at 3246.432 kb on - strand at 3246.480 kb on + strand at 3246.481 kb on - strand at 3246.511 kb on + strand at 3246.511 kb on + strand at 3246.511 kb on + strand at 3246.512 kb on - strand at 3246.612 kb on + strand at 3246.612 kb on + strand at 3246.612 kb on + strand at 3246.639 kb on - strand, within CA264_13910 at 3246.694 kb on - strand, within CA264_13910 at 3246.694 kb on - strand, within CA264_13910 at 3246.846 kb on + strand, within CA264_13910 at 3246.998 kb on + strand at 3246.998 kb on + strand at 3246.998 kb on + strand at 3246.998 kb on + strand at 3246.999 kb on - strand at 3246.999 kb on - strand at 3247.033 kb on + strand at 3247.033 kb on + strand at 3247.034 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 3,244,321 + CA264_13900 0.12 -0.4 3,244,355 - CA264_13900 0.16 -1.1 3,244,431 + CA264_13900 0.23 -0.1 3,244,432 - CA264_13900 0.23 +0.4 3,244,549 + CA264_13900 0.34 +1.4 3,244,549 + CA264_13900 0.34 -1.1 3,244,550 - CA264_13900 0.34 -0.3 3,244,550 - CA264_13900 0.34 -1.2 3,244,554 + CA264_13900 0.34 +0.8 3,244,557 - CA264_13900 0.35 +0.1 3,244,557 - CA264_13900 0.35 -0.1 3,244,594 - CA264_13900 0.38 +0.2 3,244,621 - CA264_13900 0.41 +0.7 3,244,655 + CA264_13900 0.44 +0.7 3,244,656 - CA264_13900 0.44 +0.3 3,244,716 + CA264_13900 0.50 -0.5 3,244,816 - CA264_13900 0.59 +0.3 3,245,176 - +0.1 3,245,338 + -0.2 3,245,338 + -1.5 3,245,339 - +0.7 3,245,343 - -0.3 3,245,356 - -1.2 3,245,491 + CA264_13905 0.20 -0.1 3,245,491 + CA264_13905 0.20 -0.3 3,245,493 + CA264_13905 0.20 -1.2 3,245,494 - CA264_13905 0.20 -1.3 3,245,494 - CA264_13905 0.20 -0.2 3,245,563 + CA264_13905 0.26 -1.7 3,245,622 - CA264_13905 0.30 -1.5 3,245,649 - CA264_13905 0.33 -0.2 3,245,649 - CA264_13905 0.33 -0.6 3,245,714 + CA264_13905 0.38 +0.3 3,245,714 + CA264_13905 0.38 -0.3 3,245,714 + CA264_13905 0.38 -2.4 3,245,715 - CA264_13905 0.38 -0.5 3,245,761 + CA264_13905 0.42 -0.8 3,245,761 + CA264_13905 0.42 -2.3 3,245,762 - CA264_13905 0.42 -1.9 3,245,838 + CA264_13905 0.48 -1.8 3,246,318 - CA264_13905 0.87 -2.3 3,246,386 + -0.5 3,246,431 + -1.6 3,246,431 + -0.3 3,246,432 - +0.1 3,246,432 - -2.0 3,246,480 + +0.2 3,246,481 - -0.4 3,246,511 + +0.2 3,246,511 + +0.9 3,246,511 + -0.3 3,246,512 - +0.1 3,246,612 + +0.3 3,246,612 + +0.7 3,246,612 + +0.6 3,246,639 - CA264_13910 0.14 +0.6 3,246,694 - CA264_13910 0.26 +0.6 3,246,694 - CA264_13910 0.26 +0.5 3,246,846 + CA264_13910 0.60 -0.2 3,246,998 + +0.9 3,246,998 + +0.0 3,246,998 + +0.6 3,246,998 + +1.1 3,246,999 - -0.2 3,246,999 - -0.2 3,247,033 + -2.3 3,247,033 + +1.7 3,247,034 - -0.2
Or see this region's nucleotide sequence