Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13450 and CA264_13455 are separated by 120 nucleotides CA264_13455 and CA264_13460 are separated by 627 nucleotides
CA264_13450: CA264_13450 - hypothetical protein, at 3,140,784 to 3,144,110
_13450
CA264_13455: CA264_13455 - tRNA-Ala, at 3,144,231 to 3,144,307
_13455
CA264_13460: CA264_13460 - hypothetical protein, at 3,144,935 to 3,145,369
_13460
Position (kb)
3144
3145 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3143.253 kb on - strand, within CA264_13450 at 3143.256 kb on + strand, within CA264_13450 at 3143.257 kb on - strand, within CA264_13450 at 3143.261 kb on - strand, within CA264_13450 at 3143.287 kb on - strand, within CA264_13450 at 3143.295 kb on - strand, within CA264_13450 at 3143.347 kb on - strand, within CA264_13450 at 3143.352 kb on + strand, within CA264_13450 at 3143.419 kb on - strand, within CA264_13450 at 3143.463 kb on + strand, within CA264_13450 at 3143.486 kb on - strand, within CA264_13450 at 3143.498 kb on + strand, within CA264_13450 at 3143.511 kb on + strand, within CA264_13450 at 3143.512 kb on - strand, within CA264_13450 at 3143.565 kb on - strand, within CA264_13450 at 3143.640 kb on + strand, within CA264_13450 at 3143.641 kb on - strand, within CA264_13450 at 3143.741 kb on - strand, within CA264_13450 at 3143.847 kb on + strand at 3143.848 kb on - strand at 3143.848 kb on - strand at 3143.851 kb on + strand at 3143.934 kb on + strand at 3143.934 kb on + strand at 3143.999 kb on + strand at 3144.009 kb on - strand at 3144.049 kb on - strand at 3144.064 kb on - strand at 3144.094 kb on + strand at 3144.094 kb on + strand at 3144.095 kb on - strand at 3144.095 kb on - strand at 3144.095 kb on - strand at 3144.173 kb on + strand at 3144.375 kb on + strand at 3144.400 kb on - strand at 3144.403 kb on + strand at 3144.442 kb on + strand at 3144.443 kb on - strand at 3144.468 kb on - strand at 3144.468 kb on - strand at 3144.474 kb on + strand at 3144.618 kb on - strand at 3144.629 kb on - strand at 3144.631 kb on + strand at 3144.631 kb on + strand at 3144.632 kb on - strand at 3144.632 kb on - strand at 3144.632 kb on - strand at 3144.678 kb on - strand at 3144.682 kb on - strand at 3144.682 kb on - strand at 3144.682 kb on - strand at 3144.694 kb on + strand at 3144.703 kb on + strand at 3144.705 kb on + strand at 3144.706 kb on - strand at 3144.706 kb on - strand at 3144.709 kb on + strand at 3144.712 kb on + strand at 3144.738 kb on + strand at 3144.741 kb on + strand at 3144.743 kb on + strand at 3144.743 kb on + strand at 3144.743 kb on + strand at 3144.744 kb on - strand at 3144.830 kb on - strand at 3144.833 kb on + strand at 3144.833 kb on + strand at 3144.833 kb on + strand at 3144.834 kb on - strand at 3144.837 kb on + strand at 3144.898 kb on - strand at 3144.906 kb on - strand at 3144.934 kb on + strand at 3144.934 kb on + strand at 3144.979 kb on - strand, within CA264_13460 at 3145.130 kb on + strand, within CA264_13460 at 3145.130 kb on + strand, within CA264_13460 at 3145.133 kb on + strand, within CA264_13460 at 3145.133 kb on + strand, within CA264_13460 at 3145.134 kb on - strand, within CA264_13460 at 3145.134 kb on - strand, within CA264_13460 at 3145.142 kb on + strand, within CA264_13460
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 3,143,253 - CA264_13450 0.74 -0.6 3,143,256 + CA264_13450 0.74 -0.1 3,143,257 - CA264_13450 0.74 +0.4 3,143,261 - CA264_13450 0.74 +0.6 3,143,287 - CA264_13450 0.75 +1.8 3,143,295 - CA264_13450 0.75 -0.3 3,143,347 - CA264_13450 0.77 -0.6 3,143,352 + CA264_13450 0.77 +0.3 3,143,419 - CA264_13450 0.79 -1.3 3,143,463 + CA264_13450 0.81 -0.0 3,143,486 - CA264_13450 0.81 -1.3 3,143,498 + CA264_13450 0.82 +1.6 3,143,511 + CA264_13450 0.82 -0.2 3,143,512 - CA264_13450 0.82 +0.4 3,143,565 - CA264_13450 0.84 -0.5 3,143,640 + CA264_13450 0.86 +0.9 3,143,641 - CA264_13450 0.86 +0.5 3,143,741 - CA264_13450 0.89 +0.2 3,143,847 + -0.2 3,143,848 - +0.5 3,143,848 - -1.3 3,143,851 + -1.3 3,143,934 + -1.3 3,143,934 + -1.9 3,143,999 + +0.6 3,144,009 - -0.4 3,144,049 - -0.2 3,144,064 - -0.8 3,144,094 + +0.3 3,144,094 + -1.1 3,144,095 - +1.0 3,144,095 - -0.7 3,144,095 - +1.4 3,144,173 + -0.2 3,144,375 + -0.9 3,144,400 - -0.2 3,144,403 + -0.7 3,144,442 + -1.4 3,144,443 - -0.5 3,144,468 - +0.7 3,144,468 - +0.5 3,144,474 + +0.3 3,144,618 - +0.3 3,144,629 - -0.1 3,144,631 + -0.2 3,144,631 + +0.8 3,144,632 - -0.3 3,144,632 - -0.5 3,144,632 - -0.3 3,144,678 - +1.0 3,144,682 - +1.4 3,144,682 - -0.7 3,144,682 - -2.1 3,144,694 + -0.9 3,144,703 + +0.0 3,144,705 + -1.0 3,144,706 - -0.5 3,144,706 - +1.6 3,144,709 + +0.2 3,144,712 + +0.6 3,144,738 + -0.7 3,144,741 + -0.9 3,144,743 + -0.1 3,144,743 + -0.9 3,144,743 + +0.0 3,144,744 - -0.3 3,144,830 - +0.5 3,144,833 + +0.5 3,144,833 + -0.1 3,144,833 + -0.7 3,144,834 - -1.5 3,144,837 + -0.4 3,144,898 - -0.6 3,144,906 - -0.2 3,144,934 + +0.8 3,144,934 + -0.6 3,144,979 - CA264_13460 0.10 -0.6 3,145,130 + CA264_13460 0.45 +1.6 3,145,130 + CA264_13460 0.45 -0.3 3,145,133 + CA264_13460 0.46 +1.3 3,145,133 + CA264_13460 0.46 +0.4 3,145,134 - CA264_13460 0.46 +0.0 3,145,134 - CA264_13460 0.46 +1.3 3,145,142 + CA264_13460 0.48 -0.3
Or see this region's nucleotide sequence