Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13360 and CA264_13365 are separated by 191 nucleotides CA264_13365 and CA264_13370 are separated by 3 nucleotides CA264_13370 and CA264_13375 are separated by 307 nucleotides
CA264_13360: CA264_13360 - ABC transporter ATP-binding protein, at 3,116,002 to 3,116,913
_13360
CA264_13365: CA264_13365 - molecular chaperone DnaJ, at 3,117,105 to 3,118,256
_13365
CA264_13370: CA264_13370 - nucleotide exchange factor GrpE, at 3,118,260 to 3,118,826
_13370
CA264_13375: CA264_13375 - GTPase Obg, at 3,119,134 to 3,120,126
_13375
Position (kb)
3117
3118
3119 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3116.234 kb on + strand, within CA264_13360 at 3116.249 kb on + strand, within CA264_13360 at 3116.260 kb on + strand, within CA264_13360 at 3116.261 kb on - strand, within CA264_13360 at 3116.290 kb on - strand, within CA264_13360 at 3116.290 kb on - strand, within CA264_13360 at 3116.316 kb on + strand, within CA264_13360 at 3116.362 kb on - strand, within CA264_13360 at 3116.566 kb on + strand, within CA264_13360 at 3116.660 kb on + strand, within CA264_13360 at 3116.661 kb on - strand, within CA264_13360 at 3116.917 kb on + strand at 3116.917 kb on + strand at 3116.940 kb on + strand at 3116.940 kb on + strand at 3116.941 kb on - strand at 3116.942 kb on + strand at 3116.944 kb on + strand at 3116.944 kb on + strand at 3116.945 kb on - strand at 3116.959 kb on - strand at 3116.959 kb on - strand at 3116.978 kb on - strand at 3116.989 kb on + strand at 3117.063 kb on + strand at 3117.086 kb on - strand at 3117.087 kb on + strand at 3117.425 kb on - strand, within CA264_13365 at 3117.425 kb on - strand, within CA264_13365 at 3118.261 kb on + strand at 3118.270 kb on - strand at 3118.826 kb on + strand at 3118.827 kb on - strand at 3118.858 kb on - strand at 3119.020 kb on - strand at 3119.078 kb on - strand at 3119.114 kb on + strand at 3119.114 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 3,116,234 + CA264_13360 0.25 -2.2 3,116,249 + CA264_13360 0.27 -1.8 3,116,260 + CA264_13360 0.28 -1.1 3,116,261 - CA264_13360 0.28 +0.6 3,116,290 - CA264_13360 0.32 -1.8 3,116,290 - CA264_13360 0.32 -0.8 3,116,316 + CA264_13360 0.34 -1.7 3,116,362 - CA264_13360 0.39 -0.7 3,116,566 + CA264_13360 0.62 +0.0 3,116,660 + CA264_13360 0.72 -0.3 3,116,661 - CA264_13360 0.72 -1.5 3,116,917 + -0.3 3,116,917 + -1.7 3,116,940 + -1.0 3,116,940 + +0.5 3,116,941 - -0.5 3,116,942 + +0.8 3,116,944 + +0.2 3,116,944 + -0.4 3,116,945 - -0.2 3,116,959 - -0.2 3,116,959 - -0.8 3,116,978 - -0.3 3,116,989 + -0.6 3,117,063 + +0.8 3,117,086 - -0.1 3,117,087 + -1.3 3,117,425 - CA264_13365 0.28 -0.6 3,117,425 - CA264_13365 0.28 -0.9 3,118,261 + -2.3 3,118,270 - -3.7 3,118,826 + -0.8 3,118,827 - -0.5 3,118,858 - +0.2 3,119,020 - -0.1 3,119,078 - +0.1 3,119,114 + +0.5 3,119,114 + -1.5
Or see this region's nucleotide sequence