Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12575 and CA264_12580 are separated by 51 nucleotides CA264_12580 and CA264_12585 are separated by 222 nucleotides CA264_12585 and CA264_12590 are separated by 189 nucleotides
CA264_12575: CA264_12575 - hypothetical protein, at 2,934,781 to 2,935,296
_12575
CA264_12580: CA264_12580 - hypothetical protein, at 2,935,348 to 2,935,959
_12580
CA264_12585: CA264_12585 - molecular chaperone DnaK, at 2,936,182 to 2,938,110
_12585
CA264_12590: CA264_12590 - hypothetical protein, at 2,938,300 to 2,939,556
_12590
Position (kb)
2936
2937
2938
2939 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2935.199 kb on - strand, within CA264_12575 at 2935.201 kb on + strand, within CA264_12575 at 2935.201 kb on + strand, within CA264_12575 at 2935.226 kb on - strand, within CA264_12575 at 2935.226 kb on - strand, within CA264_12575 at 2935.241 kb on - strand, within CA264_12575 at 2935.293 kb on - strand at 2935.293 kb on - strand at 2935.295 kb on - strand at 2935.295 kb on - strand at 2935.295 kb on - strand at 2935.325 kb on + strand at 2935.326 kb on - strand at 2935.326 kb on - strand at 2935.327 kb on + strand at 2935.327 kb on + strand at 2935.328 kb on - strand at 2935.332 kb on + strand at 2935.335 kb on - strand at 2935.355 kb on + strand at 2935.358 kb on + strand at 2935.358 kb on + strand at 2935.359 kb on - strand at 2935.359 kb on - strand at 2935.359 kb on - strand at 2935.412 kb on + strand, within CA264_12580 at 2935.412 kb on + strand, within CA264_12580 at 2935.413 kb on - strand, within CA264_12580 at 2935.474 kb on - strand, within CA264_12580 at 2935.573 kb on + strand, within CA264_12580 at 2935.574 kb on - strand, within CA264_12580 at 2935.574 kb on - strand, within CA264_12580 at 2935.635 kb on - strand, within CA264_12580 at 2935.753 kb on + strand, within CA264_12580 at 2935.754 kb on - strand, within CA264_12580 at 2935.754 kb on - strand, within CA264_12580 at 2935.754 kb on - strand, within CA264_12580 at 2935.758 kb on + strand, within CA264_12580 at 2935.758 kb on + strand, within CA264_12580 at 2935.790 kb on - strand, within CA264_12580 at 2935.790 kb on - strand, within CA264_12580 at 2935.790 kb on - strand, within CA264_12580 at 2935.859 kb on - strand, within CA264_12580 at 2936.026 kb on + strand at 2936.079 kb on - strand at 2936.079 kb on - strand at 2936.079 kb on - strand at 2936.086 kb on + strand at 2936.099 kb on - strand at 2936.133 kb on - strand at 2936.136 kb on - strand at 2938.109 kb on - strand at 2938.118 kb on - strand at 2938.118 kb on - strand at 2938.174 kb on - strand at 2938.281 kb on + strand at 2938.287 kb on + strand at 2938.299 kb on + strand at 2938.300 kb on - strand at 2938.300 kb on - strand at 2938.312 kb on + strand at 2938.312 kb on + strand at 2938.322 kb on + strand at 2938.380 kb on + strand at 2938.381 kb on - strand at 2938.412 kb on - strand at 2938.415 kb on + strand at 2938.415 kb on + strand at 2938.415 kb on + strand at 2938.415 kb on + strand at 2938.416 kb on - strand at 2938.416 kb on - strand at 2938.416 kb on - strand at 2938.453 kb on - strand, within CA264_12590 at 2938.491 kb on + strand, within CA264_12590 at 2938.549 kb on - strand, within CA264_12590 at 2938.556 kb on + strand, within CA264_12590 at 2938.599 kb on + strand, within CA264_12590 at 2938.600 kb on - strand, within CA264_12590 at 2938.611 kb on - strand, within CA264_12590 at 2938.628 kb on + strand, within CA264_12590 at 2938.629 kb on - strand, within CA264_12590 at 2938.630 kb on + strand, within CA264_12590 at 2938.630 kb on + strand, within CA264_12590 at 2938.630 kb on + strand, within CA264_12590 at 2938.630 kb on + strand, within CA264_12590 at 2938.631 kb on - strand, within CA264_12590 at 2938.667 kb on - strand, within CA264_12590 at 2938.714 kb on + strand, within CA264_12590 at 2938.715 kb on - strand, within CA264_12590 at 2938.747 kb on + strand, within CA264_12590 at 2938.747 kb on + strand, within CA264_12590 at 2938.747 kb on + strand, within CA264_12590 at 2938.748 kb on - strand, within CA264_12590 at 2938.782 kb on - strand, within CA264_12590 at 2938.782 kb on - strand, within CA264_12590 at 2938.827 kb on + strand, within CA264_12590 at 2938.863 kb on + strand, within CA264_12590 at 2938.876 kb on + strand, within CA264_12590 at 2938.877 kb on - strand, within CA264_12590 at 2938.877 kb on - strand, within CA264_12590 at 2938.881 kb on + strand, within CA264_12590 at 2938.881 kb on + strand, within CA264_12590 at 2938.882 kb on - strand, within CA264_12590 at 2938.964 kb on - strand, within CA264_12590 at 2938.992 kb on + strand, within CA264_12590 at 2938.997 kb on - strand, within CA264_12590 at 2939.107 kb on + strand, within CA264_12590 at 2939.107 kb on + strand, within CA264_12590 at 2939.107 kb on + strand, within CA264_12590 at 2939.107 kb on + strand, within CA264_12590 at 2939.108 kb on - strand, within CA264_12590 at 2939.108 kb on - strand, within CA264_12590
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 2,935,199 - CA264_12575 0.81 -0.1 2,935,201 + CA264_12575 0.81 -0.8 2,935,201 + CA264_12575 0.81 -0.1 2,935,226 - CA264_12575 0.86 +0.5 2,935,226 - CA264_12575 0.86 +0.5 2,935,241 - CA264_12575 0.89 -1.5 2,935,293 - -0.5 2,935,293 - +0.3 2,935,295 - -0.6 2,935,295 - +0.6 2,935,295 - +0.8 2,935,325 + -0.1 2,935,326 - -0.4 2,935,326 - -0.4 2,935,327 + -0.8 2,935,327 + -0.9 2,935,328 - +0.2 2,935,332 + -0.6 2,935,335 - -0.7 2,935,355 + +0.2 2,935,358 + -0.3 2,935,358 + -0.2 2,935,359 - +0.5 2,935,359 - +0.8 2,935,359 - +1.8 2,935,412 + CA264_12580 0.10 +0.1 2,935,412 + CA264_12580 0.10 +0.3 2,935,413 - CA264_12580 0.11 +0.9 2,935,474 - CA264_12580 0.21 -0.1 2,935,573 + CA264_12580 0.37 +0.8 2,935,574 - CA264_12580 0.37 -0.9 2,935,574 - CA264_12580 0.37 +0.3 2,935,635 - CA264_12580 0.47 +0.3 2,935,753 + CA264_12580 0.66 -0.6 2,935,754 - CA264_12580 0.66 -0.0 2,935,754 - CA264_12580 0.66 -0.5 2,935,754 - CA264_12580 0.66 +0.4 2,935,758 + CA264_12580 0.67 -0.6 2,935,758 + CA264_12580 0.67 -1.1 2,935,790 - CA264_12580 0.72 +1.0 2,935,790 - CA264_12580 0.72 +0.2 2,935,790 - CA264_12580 0.72 +0.2 2,935,859 - CA264_12580 0.83 -0.4 2,936,026 + -0.9 2,936,079 - +1.3 2,936,079 - -0.2 2,936,079 - +2.1 2,936,086 + -0.2 2,936,099 - -0.1 2,936,133 - -0.2 2,936,136 - -0.4 2,938,109 - -1.4 2,938,118 - -2.2 2,938,118 - -1.6 2,938,174 - -0.3 2,938,281 + -0.4 2,938,287 + +0.0 2,938,299 + -0.5 2,938,300 - -0.4 2,938,300 - +1.1 2,938,312 + +0.1 2,938,312 + -0.3 2,938,322 + -0.4 2,938,380 + -1.2 2,938,381 - -1.5 2,938,412 - -0.5 2,938,415 + -0.9 2,938,415 + -0.6 2,938,415 + -1.1 2,938,415 + -0.1 2,938,416 - +0.2 2,938,416 - -0.8 2,938,416 - -0.1 2,938,453 - CA264_12590 0.12 +0.6 2,938,491 + CA264_12590 0.15 +0.2 2,938,549 - CA264_12590 0.20 -0.1 2,938,556 + CA264_12590 0.20 -0.6 2,938,599 + CA264_12590 0.24 +0.9 2,938,600 - CA264_12590 0.24 -0.5 2,938,611 - CA264_12590 0.25 +0.2 2,938,628 + CA264_12590 0.26 -0.1 2,938,629 - CA264_12590 0.26 -0.3 2,938,630 + CA264_12590 0.26 +0.8 2,938,630 + CA264_12590 0.26 -0.4 2,938,630 + CA264_12590 0.26 +0.6 2,938,630 + CA264_12590 0.26 +0.5 2,938,631 - CA264_12590 0.26 +0.3 2,938,667 - CA264_12590 0.29 -0.4 2,938,714 + CA264_12590 0.33 -0.2 2,938,715 - CA264_12590 0.33 +0.1 2,938,747 + CA264_12590 0.36 +0.4 2,938,747 + CA264_12590 0.36 -0.2 2,938,747 + CA264_12590 0.36 -0.2 2,938,748 - CA264_12590 0.36 +0.2 2,938,782 - CA264_12590 0.38 +1.8 2,938,782 - CA264_12590 0.38 +0.0 2,938,827 + CA264_12590 0.42 +0.2 2,938,863 + CA264_12590 0.45 -0.8 2,938,876 + CA264_12590 0.46 +0.1 2,938,877 - CA264_12590 0.46 -0.3 2,938,877 - CA264_12590 0.46 -0.6 2,938,881 + CA264_12590 0.46 -0.9 2,938,881 + CA264_12590 0.46 +1.8 2,938,882 - CA264_12590 0.46 -0.3 2,938,964 - CA264_12590 0.53 -0.9 2,938,992 + CA264_12590 0.55 -0.9 2,938,997 - CA264_12590 0.55 -0.9 2,939,107 + CA264_12590 0.64 +0.6 2,939,107 + CA264_12590 0.64 -0.5 2,939,107 + CA264_12590 0.64 +0.3 2,939,107 + CA264_12590 0.64 -1.3 2,939,108 - CA264_12590 0.64 -0.2 2,939,108 - CA264_12590 0.64 +0.2
Or see this region's nucleotide sequence