Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_12305

Experiment: m.b. Chloride 750 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_12295 and CA264_12300 are separated by 197 nucleotidesCA264_12300 and CA264_12305 are separated by 157 nucleotidesCA264_12305 and CA264_12310 are separated by 5 nucleotidesCA264_12310 and CA264_12315 are separated by 204 nucleotides CA264_12295: CA264_12295 - transcriptional regulator, at 2,866,171 to 2,866,596 _12295 CA264_12300: CA264_12300 - RNase III inhibitor, at 2,866,794 to 2,867,327 _12300 CA264_12305: CA264_12305 - MRP family ATP-binding protein, at 2,867,485 to 2,868,588 _12305 CA264_12310: CA264_12310 - NifU family protein, at 2,868,594 to 2,868,863 _12310 CA264_12315: CA264_12315 - fumarylacetoacetase, at 2,869,068 to 2,870,339 _12315 Position (kb) 2867 2868 2869Strain fitness (log2 ratio) -2 -1 0 1 2at 2866.489 kb on - strand, within CA264_12295at 2866.489 kb on - strand, within CA264_12295at 2866.523 kb on - strand, within CA264_12295at 2866.567 kb on + strandat 2866.567 kb on + strandat 2866.568 kb on - strandat 2866.568 kb on - strandat 2866.601 kb on - strandat 2866.601 kb on - strandat 2866.605 kb on + strandat 2866.606 kb on - strandat 2866.607 kb on + strandat 2866.747 kb on - strandat 2866.748 kb on + strandat 2866.749 kb on - strandat 2866.749 kb on - strandat 2866.749 kb on - strandat 2866.749 kb on - strandat 2866.753 kb on + strandat 2866.753 kb on + strandat 2866.753 kb on + strandat 2866.753 kb on + strandat 2866.753 kb on + strandat 2866.763 kb on - strandat 2866.871 kb on + strand, within CA264_12300at 2866.872 kb on - strand, within CA264_12300at 2866.948 kb on + strand, within CA264_12300at 2866.977 kb on + strand, within CA264_12300at 2866.978 kb on - strand, within CA264_12300at 2867.212 kb on - strand, within CA264_12300at 2867.289 kb on + strandat 2867.289 kb on + strandat 2867.291 kb on + strandat 2867.310 kb on + strandat 2867.310 kb on + strandat 2867.312 kb on + strandat 2867.313 kb on - strandat 2867.313 kb on - strandat 2867.321 kb on + strandat 2867.380 kb on + strandat 2867.385 kb on - strandat 2867.385 kb on - strandat 2867.419 kb on + strandat 2867.419 kb on + strandat 2867.419 kb on + strandat 2867.420 kb on - strandat 2867.420 kb on - strandat 2867.444 kb on - strandat 2868.579 kb on + strandat 2868.592 kb on - strandat 2868.704 kb on - strand, within CA264_12310at 2868.704 kb on - strand, within CA264_12310at 2868.878 kb on + strandat 2868.879 kb on - strandat 2868.883 kb on + strandat 2868.884 kb on - strandat 2868.884 kb on - strandat 2868.899 kb on + strandat 2868.928 kb on + strandat 2869.012 kb on - strandat 2869.041 kb on + strandat 2869.042 kb on - strandat 2869.072 kb on + strandat 2869.072 kb on + strandat 2869.111 kb on + strandat 2869.111 kb on + strandat 2869.111 kb on + strandat 2869.206 kb on + strand, within CA264_12315at 2869.207 kb on - strand, within CA264_12315at 2869.207 kb on - strand, within CA264_12315at 2869.255 kb on + strand, within CA264_12315at 2869.448 kb on - strand, within CA264_12315at 2869.524 kb on - strand, within CA264_12315at 2869.567 kb on - strand, within CA264_12315

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM
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2,866,489 - CA264_12295 0.75 -0.5
2,866,489 - CA264_12295 0.75 +0.1
2,866,523 - CA264_12295 0.83 -0.7
2,866,567 + -0.3
2,866,567 + +0.2
2,866,568 - -0.9
2,866,568 - +0.5
2,866,601 - -0.9
2,866,601 - +0.1
2,866,605 + +0.8
2,866,606 - -0.2
2,866,607 + +0.2
2,866,747 - +0.7
2,866,748 + +1.3
2,866,749 - +0.2
2,866,749 - +0.8
2,866,749 - -0.1
2,866,749 - +0.5
2,866,753 + -0.2
2,866,753 + -0.2
2,866,753 + +0.9
2,866,753 + -2.4
2,866,753 + -1.0
2,866,763 - -0.6
2,866,871 + CA264_12300 0.14 -0.1
2,866,872 - CA264_12300 0.15 +1.5
2,866,948 + CA264_12300 0.29 +0.2
2,866,977 + CA264_12300 0.34 +0.8
2,866,978 - CA264_12300 0.34 +0.5
2,867,212 - CA264_12300 0.78 +0.1
2,867,289 + +1.4
2,867,289 + +0.9
2,867,291 + -0.2
2,867,310 + -0.3
2,867,310 + +1.0
2,867,312 + +0.5
2,867,313 - -0.8
2,867,313 - +2.2
2,867,321 + -0.3
2,867,380 + -0.1
2,867,385 - -0.3
2,867,385 - -0.4
2,867,419 + +1.1
2,867,419 + +1.9
2,867,419 + +0.4
2,867,420 - -0.6
2,867,420 - +0.5
2,867,444 - -1.4
2,868,579 + -0.3
2,868,592 - -1.1
2,868,704 - CA264_12310 0.41 -1.8
2,868,704 - CA264_12310 0.41 -1.8
2,868,878 + +0.1
2,868,879 - -0.6
2,868,883 + -0.3
2,868,884 - -0.1
2,868,884 - -1.4
2,868,899 + +0.2
2,868,928 + +0.1
2,869,012 - +1.6
2,869,041 + -0.4
2,869,042 - +1.3
2,869,072 + -1.1
2,869,072 + -0.1
2,869,111 + -0.7
2,869,111 + -1.1
2,869,111 + -0.4
2,869,206 + CA264_12315 0.11 -0.5
2,869,207 - CA264_12315 0.11 -1.2
2,869,207 - CA264_12315 0.11 -0.2
2,869,255 + CA264_12315 0.15 +1.6
2,869,448 - CA264_12315 0.30 -1.7
2,869,524 - CA264_12315 0.36 +0.8
2,869,567 - CA264_12315 0.39 -1.6

Or see this region's nucleotide sequence