Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12135 and CA264_12140 are separated by 60 nucleotides CA264_12140 and CA264_12145 are separated by 37 nucleotides
CA264_12135: CA264_12135 - L-iditol 2-dehydrogenase, at 2,829,763 to 2,830,716
_12135
CA264_12140: CA264_12140 - NAD-dependent dehydratase, at 2,830,777 to 2,832,837
_12140
CA264_12145: CA264_12145 - nucleoside-diphosphate-sugar epimerase, at 2,832,875 to 2,833,993
_12145
Position (kb)
2830
2831
2832
2833 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 2829.858 kb on - strand at 2829.910 kb on + strand, within CA264_12135 at 2829.919 kb on - strand, within CA264_12135 at 2829.919 kb on - strand, within CA264_12135 at 2830.300 kb on + strand, within CA264_12135 at 2830.455 kb on - strand, within CA264_12135 at 2830.773 kb on + strand at 2830.797 kb on + strand at 2830.958 kb on + strand at 2830.959 kb on - strand at 2830.962 kb on - strand at 2831.313 kb on - strand, within CA264_12140 at 2831.336 kb on + strand, within CA264_12140 at 2831.408 kb on + strand, within CA264_12140 at 2831.409 kb on - strand, within CA264_12140 at 2831.483 kb on + strand, within CA264_12140 at 2831.701 kb on + strand, within CA264_12140 at 2831.881 kb on + strand, within CA264_12140 at 2831.897 kb on + strand, within CA264_12140 at 2832.282 kb on - strand, within CA264_12140 at 2832.440 kb on + strand, within CA264_12140 at 2832.579 kb on + strand, within CA264_12140 at 2832.579 kb on + strand, within CA264_12140 at 2832.596 kb on - strand, within CA264_12140 at 2832.617 kb on - strand, within CA264_12140 at 2832.781 kb on + strand at 2833.140 kb on + strand, within CA264_12145 at 2833.140 kb on + strand, within CA264_12145 at 2833.323 kb on + strand, within CA264_12145 at 2833.446 kb on + strand, within CA264_12145 at 2833.596 kb on + strand, within CA264_12145 at 2833.768 kb on - strand, within CA264_12145 at 2833.768 kb on - strand, within CA264_12145
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 2,829,858 - -2.2 2,829,910 + CA264_12135 0.15 -0.3 2,829,919 - CA264_12135 0.16 -4.0 2,829,919 - CA264_12135 0.16 -4.6 2,830,300 + CA264_12135 0.56 -1.6 2,830,455 - CA264_12135 0.73 -5.2 2,830,773 + -0.2 2,830,797 + -1.4 2,830,958 + -2.2 2,830,959 - -3.2 2,830,962 - -3.2 2,831,313 - CA264_12140 0.26 -4.1 2,831,336 + CA264_12140 0.27 -2.7 2,831,408 + CA264_12140 0.31 -1.8 2,831,409 - CA264_12140 0.31 -1.8 2,831,483 + CA264_12140 0.34 -2.2 2,831,701 + CA264_12140 0.45 -2.7 2,831,881 + CA264_12140 0.54 -2.1 2,831,897 + CA264_12140 0.54 -1.9 2,832,282 - CA264_12140 0.73 -0.4 2,832,440 + CA264_12140 0.81 -0.3 2,832,579 + CA264_12140 0.87 +0.2 2,832,579 + CA264_12140 0.87 -0.6 2,832,596 - CA264_12140 0.88 -1.5 2,832,617 - CA264_12140 0.89 -3.0 2,832,781 + -2.7 2,833,140 + CA264_12145 0.24 -3.9 2,833,140 + CA264_12145 0.24 -2.5 2,833,323 + CA264_12145 0.40 -3.1 2,833,446 + CA264_12145 0.51 -1.5 2,833,596 + CA264_12145 0.64 -1.1 2,833,768 - CA264_12145 0.80 -3.1 2,833,768 - CA264_12145 0.80 -0.2
Or see this region's nucleotide sequence