Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_12110

Experiment: m.b. Chloride 750 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_12105 and CA264_12110 are separated by 121 nucleotidesCA264_12110 and CA264_12115 overlap by 4 nucleotides CA264_12105: CA264_12105 - methyltransferase, TIGR04290 family, at 2,823,076 to 2,823,891 _12105 CA264_12110: CA264_12110 - glycosyltransferase, at 2,824,013 to 2,825,122 _12110 CA264_12115: CA264_12115 - hypothetical protein, at 2,825,119 to 2,826,225 _12115 Position (kb) 2824 2825 2826Strain fitness (log2 ratio) -3 -2 -1 0 1at 2823.102 kb on - strandat 2823.515 kb on + strand, within CA264_12105at 2823.700 kb on + strand, within CA264_12105at 2823.707 kb on + strand, within CA264_12105at 2823.767 kb on + strand, within CA264_12105at 2823.767 kb on + strand, within CA264_12105at 2823.768 kb on - strand, within CA264_12105at 2823.768 kb on - strand, within CA264_12105at 2823.768 kb on - strand, within CA264_12105at 2823.768 kb on - strand, within CA264_12105at 2823.789 kb on + strand, within CA264_12105at 2823.808 kb on + strand, within CA264_12105at 2823.808 kb on + strand, within CA264_12105at 2823.808 kb on + strand, within CA264_12105at 2823.809 kb on - strand, within CA264_12105at 2823.928 kb on - strandat 2823.928 kb on - strandat 2823.956 kb on + strandat 2823.956 kb on + strandat 2824.014 kb on + strandat 2824.062 kb on - strandat 2824.156 kb on + strand, within CA264_12110at 2824.156 kb on + strand, within CA264_12110at 2824.448 kb on + strand, within CA264_12110at 2824.461 kb on + strand, within CA264_12110at 2824.630 kb on - strand, within CA264_12110at 2824.657 kb on - strand, within CA264_12110at 2824.713 kb on + strand, within CA264_12110at 2824.714 kb on - strand, within CA264_12110at 2824.717 kb on + strand, within CA264_12110at 2824.718 kb on - strand, within CA264_12110at 2824.718 kb on - strand, within CA264_12110at 2824.746 kb on + strand, within CA264_12110at 2824.747 kb on - strand, within CA264_12110at 2824.794 kb on + strand, within CA264_12110at 2824.795 kb on - strand, within CA264_12110at 2824.861 kb on - strand, within CA264_12110at 2824.936 kb on - strand, within CA264_12110at 2824.953 kb on + strand, within CA264_12110at 2825.036 kb on + strandat 2825.037 kb on - strandat 2825.112 kb on - strandat 2825.137 kb on - strandat 2825.191 kb on - strandat 2825.192 kb on + strandat 2825.192 kb on + strandat 2825.193 kb on - strandat 2825.306 kb on - strand, within CA264_12115at 2825.443 kb on - strand, within CA264_12115at 2825.484 kb on + strand, within CA264_12115at 2825.484 kb on + strand, within CA264_12115at 2825.485 kb on - strand, within CA264_12115at 2825.487 kb on + strand, within CA264_12115at 2825.487 kb on + strand, within CA264_12115at 2825.487 kb on + strand, within CA264_12115at 2825.489 kb on + strand, within CA264_12115at 2825.509 kb on - strand, within CA264_12115at 2825.509 kb on - strand, within CA264_12115at 2825.712 kb on - strand, within CA264_12115at 2825.755 kb on + strand, within CA264_12115at 2825.795 kb on + strand, within CA264_12115at 2825.960 kb on - strand, within CA264_12115at 2825.997 kb on + strand, within CA264_12115at 2826.031 kb on + strand, within CA264_12115at 2826.080 kb on + strand, within CA264_12115

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM
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2,823,102 - -2.2
2,823,515 + CA264_12105 0.54 -0.6
2,823,700 + CA264_12105 0.76 +0.0
2,823,707 + CA264_12105 0.77 -0.3
2,823,767 + CA264_12105 0.85 -0.3
2,823,767 + CA264_12105 0.85 +0.2
2,823,768 - CA264_12105 0.85 +0.8
2,823,768 - CA264_12105 0.85 +0.5
2,823,768 - CA264_12105 0.85 +0.3
2,823,768 - CA264_12105 0.85 +0.2
2,823,789 + CA264_12105 0.87 +0.1
2,823,808 + CA264_12105 0.90 -0.4
2,823,808 + CA264_12105 0.90 +1.4
2,823,808 + CA264_12105 0.90 -0.1
2,823,809 - CA264_12105 0.90 -0.3
2,823,928 - +0.4
2,823,928 - +0.1
2,823,956 + +0.7
2,823,956 + -1.4
2,824,014 + +0.3
2,824,062 - -0.9
2,824,156 + CA264_12110 0.13 +0.7
2,824,156 + CA264_12110 0.13 -0.4
2,824,448 + CA264_12110 0.39 -1.5
2,824,461 + CA264_12110 0.40 -0.1
2,824,630 - CA264_12110 0.56 -0.3
2,824,657 - CA264_12110 0.58 +1.3
2,824,713 + CA264_12110 0.63 +0.4
2,824,714 - CA264_12110 0.63 +0.4
2,824,717 + CA264_12110 0.63 +0.1
2,824,718 - CA264_12110 0.64 +0.3
2,824,718 - CA264_12110 0.64 +1.0
2,824,746 + CA264_12110 0.66 -0.7
2,824,747 - CA264_12110 0.66 +0.7
2,824,794 + CA264_12110 0.70 +0.5
2,824,795 - CA264_12110 0.70 -0.1
2,824,861 - CA264_12110 0.76 -0.5
2,824,936 - CA264_12110 0.83 +0.0
2,824,953 + CA264_12110 0.85 +1.0
2,825,036 + +0.8
2,825,037 - +1.1
2,825,112 - +0.1
2,825,137 - +0.3
2,825,191 - -0.6
2,825,192 + -0.5
2,825,192 + -1.3
2,825,193 - -1.0
2,825,306 - CA264_12115 0.17 -1.9
2,825,443 - CA264_12115 0.29 -1.2
2,825,484 + CA264_12115 0.33 -1.8
2,825,484 + CA264_12115 0.33 +0.1
2,825,485 - CA264_12115 0.33 -2.3
2,825,487 + CA264_12115 0.33 -2.0
2,825,487 + CA264_12115 0.33 -2.5
2,825,487 + CA264_12115 0.33 -2.2
2,825,489 + CA264_12115 0.33 -0.0
2,825,509 - CA264_12115 0.35 -0.4
2,825,509 - CA264_12115 0.35 -0.1
2,825,712 - CA264_12115 0.54 -3.0
2,825,755 + CA264_12115 0.57 -1.8
2,825,795 + CA264_12115 0.61 -3.1
2,825,960 - CA264_12115 0.76 -1.3
2,825,997 + CA264_12115 0.79 -2.9
2,826,031 + CA264_12115 0.82 -1.4
2,826,080 + CA264_12115 0.87 -1.7

Or see this region's nucleotide sequence