Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12075 and CA264_12080 are separated by 3 nucleotides CA264_12080 and CA264_12085 are separated by 3 nucleotides CA264_12085 and CA264_12090 overlap by 4 nucleotides
CA264_12075: CA264_12075 - PAS domain S-box protein, at 2,814,014 to 2,819,236
_12075
CA264_12080: CA264_12080 - response regulator, at 2,819,240 to 2,819,620
_12080
CA264_12085: CA264_12085 - hypothetical protein, at 2,819,624 to 2,819,899
_12085
CA264_12090: CA264_12090 - hydrolase, at 2,819,896 to 2,820,657
_12090
Position (kb)
2819
2820 Strain fitness (log2 ratio)
-2
-1
0
1 at 2818.326 kb on + strand, within CA264_12075 at 2818.461 kb on + strand, within CA264_12075 at 2818.462 kb on - strand, within CA264_12075 at 2818.462 kb on - strand, within CA264_12075 at 2818.472 kb on - strand, within CA264_12075 at 2818.475 kb on + strand, within CA264_12075 at 2818.475 kb on + strand, within CA264_12075 at 2818.476 kb on - strand, within CA264_12075 at 2818.476 kb on - strand, within CA264_12075 at 2818.476 kb on - strand, within CA264_12075 at 2818.476 kb on - strand, within CA264_12075 at 2818.476 kb on - strand, within CA264_12075 at 2818.484 kb on + strand, within CA264_12075 at 2818.484 kb on + strand, within CA264_12075 at 2818.567 kb on - strand, within CA264_12075 at 2818.567 kb on - strand, within CA264_12075 at 2818.635 kb on + strand, within CA264_12075 at 2818.635 kb on + strand, within CA264_12075 at 2818.635 kb on + strand, within CA264_12075 at 2818.636 kb on - strand, within CA264_12075 at 2818.636 kb on - strand, within CA264_12075 at 2818.778 kb on + strand at 2818.921 kb on - strand at 2818.954 kb on + strand at 2818.966 kb on - strand at 2819.028 kb on + strand at 2819.029 kb on - strand at 2819.037 kb on - strand at 2819.069 kb on - strand at 2819.095 kb on + strand at 2819.096 kb on - strand at 2819.125 kb on - strand at 2819.158 kb on + strand at 2819.160 kb on + strand at 2819.160 kb on + strand at 2819.160 kb on + strand at 2819.160 kb on + strand at 2819.161 kb on - strand at 2819.161 kb on - strand at 2819.224 kb on + strand at 2819.225 kb on - strand at 2819.226 kb on + strand at 2819.226 kb on + strand at 2819.534 kb on - strand, within CA264_12080 at 2819.607 kb on - strand at 2819.609 kb on - strand at 2819.771 kb on + strand, within CA264_12085 at 2819.772 kb on - strand, within CA264_12085 at 2819.903 kb on + strand at 2819.903 kb on + strand at 2819.903 kb on + strand at 2820.254 kb on - strand, within CA264_12090 at 2820.390 kb on + strand, within CA264_12090 at 2820.391 kb on - strand, within CA264_12090 at 2820.391 kb on - strand, within CA264_12090 at 2820.394 kb on + strand, within CA264_12090 at 2820.394 kb on + strand, within CA264_12090 at 2820.395 kb on - strand, within CA264_12090 at 2820.553 kb on + strand, within CA264_12090 at 2820.554 kb on - strand, within CA264_12090 at 2820.620 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 2,818,326 + CA264_12075 0.83 +0.3 2,818,461 + CA264_12075 0.85 +1.1 2,818,462 - CA264_12075 0.85 -1.1 2,818,462 - CA264_12075 0.85 +0.8 2,818,472 - CA264_12075 0.85 +0.7 2,818,475 + CA264_12075 0.85 +0.7 2,818,475 + CA264_12075 0.85 -0.4 2,818,476 - CA264_12075 0.85 +0.6 2,818,476 - CA264_12075 0.85 -0.5 2,818,476 - CA264_12075 0.85 -0.1 2,818,476 - CA264_12075 0.85 +0.4 2,818,476 - CA264_12075 0.85 +0.1 2,818,484 + CA264_12075 0.86 +1.1 2,818,484 + CA264_12075 0.86 +0.8 2,818,567 - CA264_12075 0.87 -0.4 2,818,567 - CA264_12075 0.87 +0.5 2,818,635 + CA264_12075 0.88 +1.7 2,818,635 + CA264_12075 0.88 +0.4 2,818,635 + CA264_12075 0.88 +0.5 2,818,636 - CA264_12075 0.88 -0.4 2,818,636 - CA264_12075 0.88 +0.6 2,818,778 + +0.4 2,818,921 - -0.6 2,818,954 + -0.2 2,818,966 - +0.6 2,819,028 + -0.8 2,819,029 - -0.3 2,819,037 - +0.2 2,819,069 - +1.3 2,819,095 + +0.4 2,819,096 - +0.5 2,819,125 - -0.3 2,819,158 + -0.4 2,819,160 + -0.6 2,819,160 + +0.5 2,819,160 + +1.5 2,819,160 + +0.1 2,819,161 - -0.1 2,819,161 - -0.3 2,819,224 + +1.0 2,819,225 - +0.3 2,819,226 + +0.1 2,819,226 + -1.7 2,819,534 - CA264_12080 0.77 +0.3 2,819,607 - +0.7 2,819,609 - -0.4 2,819,771 + CA264_12085 0.53 -2.1 2,819,772 - CA264_12085 0.54 +0.2 2,819,903 + -0.9 2,819,903 + -1.8 2,819,903 + -0.8 2,820,254 - CA264_12090 0.47 -0.4 2,820,390 + CA264_12090 0.65 -0.1 2,820,391 - CA264_12090 0.65 -0.4 2,820,391 - CA264_12090 0.65 -0.8 2,820,394 + CA264_12090 0.65 -0.2 2,820,394 + CA264_12090 0.65 -1.0 2,820,395 - CA264_12090 0.65 -0.7 2,820,553 + CA264_12090 0.86 -1.1 2,820,554 - CA264_12090 0.86 -1.2 2,820,620 + -1.5
Or see this region's nucleotide sequence