Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11430 and CA264_11435 are separated by 17 nucleotides CA264_11435 and CA264_11440 are separated by 62 nucleotides
CA264_11430: CA264_11430 - endonuclease, at 2,648,989 to 2,649,936
_11430
CA264_11435: CA264_11435 - FAD-dependent oxidoreductase, at 2,649,954 to 2,651,351
_11435
CA264_11440: CA264_11440 - hypothetical protein, at 2,651,414 to 2,653,195
_11440
Position (kb)
2649
2650
2651
2652 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2648.959 kb on - strand at 2648.959 kb on - strand at 2648.960 kb on + strand at 2648.960 kb on + strand at 2648.961 kb on - strand at 2648.961 kb on - strand at 2648.961 kb on - strand at 2648.961 kb on - strand at 2648.976 kb on - strand at 2648.990 kb on + strand at 2649.112 kb on + strand, within CA264_11430 at 2649.202 kb on + strand, within CA264_11430 at 2649.212 kb on + strand, within CA264_11430 at 2649.212 kb on + strand, within CA264_11430 at 2649.212 kb on + strand, within CA264_11430 at 2649.213 kb on - strand, within CA264_11430 at 2649.213 kb on - strand, within CA264_11430 at 2649.213 kb on - strand, within CA264_11430 at 2649.249 kb on - strand, within CA264_11430 at 2649.299 kb on + strand, within CA264_11430 at 2649.341 kb on - strand, within CA264_11430 at 2649.431 kb on - strand, within CA264_11430 at 2649.483 kb on + strand, within CA264_11430 at 2649.506 kb on + strand, within CA264_11430 at 2649.575 kb on + strand, within CA264_11430 at 2649.681 kb on + strand, within CA264_11430 at 2649.685 kb on + strand, within CA264_11430 at 2649.685 kb on + strand, within CA264_11430 at 2649.685 kb on + strand, within CA264_11430 at 2649.685 kb on + strand, within CA264_11430 at 2649.685 kb on + strand, within CA264_11430 at 2649.686 kb on - strand, within CA264_11430 at 2649.688 kb on + strand, within CA264_11430 at 2649.688 kb on + strand, within CA264_11430 at 2649.688 kb on + strand, within CA264_11430 at 2649.688 kb on + strand, within CA264_11430 at 2649.689 kb on - strand, within CA264_11430 at 2649.712 kb on + strand, within CA264_11430 at 2649.713 kb on - strand, within CA264_11430 at 2649.718 kb on + strand, within CA264_11430 at 2649.718 kb on + strand, within CA264_11430 at 2649.719 kb on - strand, within CA264_11430 at 2649.790 kb on - strand, within CA264_11430 at 2649.795 kb on + strand, within CA264_11430 at 2649.796 kb on - strand, within CA264_11430 at 2649.796 kb on - strand, within CA264_11430 at 2649.800 kb on - strand, within CA264_11430 at 2649.800 kb on - strand, within CA264_11430 at 2649.805 kb on - strand, within CA264_11430 at 2649.838 kb on - strand, within CA264_11430 at 2649.872 kb on - strand at 2649.936 kb on + strand at 2650.036 kb on - strand at 2650.106 kb on + strand, within CA264_11435 at 2650.106 kb on + strand, within CA264_11435 at 2650.137 kb on - strand, within CA264_11435 at 2650.137 kb on - strand, within CA264_11435 at 2650.161 kb on - strand, within CA264_11435 at 2650.222 kb on + strand, within CA264_11435 at 2650.223 kb on - strand, within CA264_11435 at 2650.347 kb on + strand, within CA264_11435 at 2650.347 kb on + strand, within CA264_11435 at 2650.347 kb on + strand, within CA264_11435 at 2650.347 kb on + strand, within CA264_11435 at 2650.348 kb on - strand, within CA264_11435 at 2650.348 kb on - strand, within CA264_11435 at 2650.352 kb on - strand, within CA264_11435 at 2650.435 kb on + strand, within CA264_11435 at 2650.436 kb on - strand, within CA264_11435 at 2650.447 kb on + strand, within CA264_11435 at 2650.447 kb on + strand, within CA264_11435 at 2650.541 kb on + strand, within CA264_11435 at 2650.551 kb on + strand, within CA264_11435 at 2650.551 kb on + strand, within CA264_11435 at 2650.575 kb on - strand, within CA264_11435 at 2650.579 kb on - strand, within CA264_11435 at 2650.650 kb on + strand, within CA264_11435 at 2650.655 kb on + strand, within CA264_11435 at 2650.655 kb on + strand, within CA264_11435 at 2650.655 kb on + strand, within CA264_11435 at 2650.706 kb on - strand, within CA264_11435 at 2650.727 kb on + strand, within CA264_11435 at 2650.779 kb on - strand, within CA264_11435 at 2650.882 kb on - strand, within CA264_11435 at 2650.882 kb on - strand, within CA264_11435 at 2650.882 kb on - strand, within CA264_11435 at 2650.884 kb on - strand, within CA264_11435 at 2650.941 kb on - strand, within CA264_11435 at 2650.945 kb on - strand, within CA264_11435 at 2650.963 kb on + strand, within CA264_11435 at 2651.007 kb on + strand, within CA264_11435 at 2651.008 kb on - strand, within CA264_11435 at 2651.034 kb on + strand, within CA264_11435 at 2651.035 kb on - strand, within CA264_11435 at 2651.035 kb on - strand, within CA264_11435 at 2651.041 kb on - strand, within CA264_11435 at 2651.105 kb on + strand, within CA264_11435 at 2651.163 kb on + strand, within CA264_11435 at 2651.165 kb on + strand, within CA264_11435 at 2651.166 kb on - strand, within CA264_11435 at 2651.187 kb on - strand, within CA264_11435 at 2651.225 kb on + strand at 2651.226 kb on - strand at 2651.262 kb on - strand at 2651.366 kb on + strand at 2651.367 kb on - strand at 2651.370 kb on - strand at 2651.381 kb on + strand at 2651.381 kb on + strand at 2651.392 kb on - strand at 2651.459 kb on + strand at 2651.459 kb on + strand at 2651.460 kb on - strand at 2651.579 kb on + strand at 2651.583 kb on - strand at 2651.610 kb on - strand, within CA264_11440 at 2651.646 kb on - strand, within CA264_11440 at 2651.699 kb on + strand, within CA264_11440 at 2651.753 kb on + strand, within CA264_11440 at 2651.753 kb on + strand, within CA264_11440 at 2651.773 kb on + strand, within CA264_11440 at 2651.783 kb on + strand, within CA264_11440 at 2651.840 kb on + strand, within CA264_11440 at 2651.842 kb on + strand, within CA264_11440 at 2651.843 kb on - strand, within CA264_11440 at 2651.892 kb on - strand, within CA264_11440 at 2651.898 kb on - strand, within CA264_11440 at 2651.898 kb on - strand, within CA264_11440 at 2651.899 kb on + strand, within CA264_11440 at 2651.899 kb on + strand, within CA264_11440 at 2651.962 kb on + strand, within CA264_11440 at 2651.963 kb on - strand, within CA264_11440 at 2651.963 kb on - strand, within CA264_11440 at 2651.963 kb on - strand, within CA264_11440 at 2651.965 kb on + strand, within CA264_11440 at 2651.986 kb on + strand, within CA264_11440 at 2651.986 kb on + strand, within CA264_11440 at 2651.990 kb on + strand, within CA264_11440 at 2651.990 kb on + strand, within CA264_11440 at 2651.991 kb on - strand, within CA264_11440 at 2652.008 kb on + strand, within CA264_11440 at 2652.008 kb on + strand, within CA264_11440 at 2652.008 kb on + strand, within CA264_11440 at 2652.009 kb on - strand, within CA264_11440 at 2652.009 kb on - strand, within CA264_11440 at 2652.009 kb on - strand, within CA264_11440 at 2652.020 kb on - strand, within CA264_11440 at 2652.021 kb on + strand, within CA264_11440 at 2652.021 kb on + strand, within CA264_11440 at 2652.021 kb on + strand, within CA264_11440 at 2652.021 kb on + strand, within CA264_11440 at 2652.021 kb on + strand, within CA264_11440 at 2652.021 kb on + strand, within CA264_11440 at 2652.021 kb on + strand, within CA264_11440 at 2652.021 kb on + strand, within CA264_11440 at 2652.022 kb on - strand, within CA264_11440 at 2652.022 kb on - strand, within CA264_11440 at 2652.022 kb on - strand, within CA264_11440 at 2652.025 kb on + strand, within CA264_11440 at 2652.026 kb on - strand, within CA264_11440 at 2652.038 kb on + strand, within CA264_11440 at 2652.188 kb on - strand, within CA264_11440 at 2652.192 kb on - strand, within CA264_11440 at 2652.192 kb on - strand, within CA264_11440 at 2652.197 kb on - strand, within CA264_11440 at 2652.197 kb on - strand, within CA264_11440 at 2652.251 kb on + strand, within CA264_11440
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 2,648,959 - -0.1 2,648,959 - -1.5 2,648,960 + +0.1 2,648,960 + -0.7 2,648,961 - -0.4 2,648,961 - -0.3 2,648,961 - +1.0 2,648,961 - -0.2 2,648,976 - -0.1 2,648,990 + -1.0 2,649,112 + CA264_11430 0.13 -1.4 2,649,202 + CA264_11430 0.22 +0.1 2,649,212 + CA264_11430 0.24 -0.6 2,649,212 + CA264_11430 0.24 -2.1 2,649,212 + CA264_11430 0.24 -0.2 2,649,213 - CA264_11430 0.24 -0.2 2,649,213 - CA264_11430 0.24 +0.6 2,649,213 - CA264_11430 0.24 -0.2 2,649,249 - CA264_11430 0.27 -0.7 2,649,299 + CA264_11430 0.33 -0.6 2,649,341 - CA264_11430 0.37 -0.4 2,649,431 - CA264_11430 0.47 -0.6 2,649,483 + CA264_11430 0.52 -1.0 2,649,506 + CA264_11430 0.55 +0.3 2,649,575 + CA264_11430 0.62 +0.1 2,649,681 + CA264_11430 0.73 -0.1 2,649,685 + CA264_11430 0.73 +0.1 2,649,685 + CA264_11430 0.73 +0.4 2,649,685 + CA264_11430 0.73 -0.5 2,649,685 + CA264_11430 0.73 -0.3 2,649,685 + CA264_11430 0.73 -0.6 2,649,686 - CA264_11430 0.74 -0.6 2,649,688 + CA264_11430 0.74 -0.3 2,649,688 + CA264_11430 0.74 -0.1 2,649,688 + CA264_11430 0.74 -1.1 2,649,688 + CA264_11430 0.74 -0.1 2,649,689 - CA264_11430 0.74 -1.1 2,649,712 + CA264_11430 0.76 +0.0 2,649,713 - CA264_11430 0.76 -0.6 2,649,718 + CA264_11430 0.77 -0.6 2,649,718 + CA264_11430 0.77 -1.0 2,649,719 - CA264_11430 0.77 -0.4 2,649,790 - CA264_11430 0.84 -1.4 2,649,795 + CA264_11430 0.85 -0.3 2,649,796 - CA264_11430 0.85 -0.5 2,649,796 - CA264_11430 0.85 -0.6 2,649,800 - CA264_11430 0.86 -1.2 2,649,800 - CA264_11430 0.86 -1.7 2,649,805 - CA264_11430 0.86 -1.2 2,649,838 - CA264_11430 0.90 -0.8 2,649,872 - -0.1 2,649,936 + +1.2 2,650,036 - -0.2 2,650,106 + CA264_11435 0.11 -0.4 2,650,106 + CA264_11435 0.11 -0.6 2,650,137 - CA264_11435 0.13 -0.7 2,650,137 - CA264_11435 0.13 -2.3 2,650,161 - CA264_11435 0.15 -0.7 2,650,222 + CA264_11435 0.19 -0.6 2,650,223 - CA264_11435 0.19 -0.6 2,650,347 + CA264_11435 0.28 -0.5 2,650,347 + CA264_11435 0.28 +0.5 2,650,347 + CA264_11435 0.28 -0.6 2,650,347 + CA264_11435 0.28 -1.5 2,650,348 - CA264_11435 0.28 +0.7 2,650,348 - CA264_11435 0.28 -1.7 2,650,352 - CA264_11435 0.28 +0.0 2,650,435 + CA264_11435 0.34 -0.2 2,650,436 - CA264_11435 0.34 -0.4 2,650,447 + CA264_11435 0.35 -1.3 2,650,447 + CA264_11435 0.35 +0.3 2,650,541 + CA264_11435 0.42 -0.6 2,650,551 + CA264_11435 0.43 -0.2 2,650,551 + CA264_11435 0.43 -0.9 2,650,575 - CA264_11435 0.44 -0.2 2,650,579 - CA264_11435 0.45 -0.7 2,650,650 + CA264_11435 0.50 +0.0 2,650,655 + CA264_11435 0.50 +0.8 2,650,655 + CA264_11435 0.50 +0.1 2,650,655 + CA264_11435 0.50 +0.2 2,650,706 - CA264_11435 0.54 +0.8 2,650,727 + CA264_11435 0.55 -0.0 2,650,779 - CA264_11435 0.59 -0.1 2,650,882 - CA264_11435 0.66 -0.9 2,650,882 - CA264_11435 0.66 -0.2 2,650,882 - CA264_11435 0.66 -0.4 2,650,884 - CA264_11435 0.67 -0.8 2,650,941 - CA264_11435 0.71 +0.8 2,650,945 - CA264_11435 0.71 -0.6 2,650,963 + CA264_11435 0.72 -0.1 2,651,007 + CA264_11435 0.75 -0.3 2,651,008 - CA264_11435 0.75 -0.6 2,651,034 + CA264_11435 0.77 -0.6 2,651,035 - CA264_11435 0.77 +0.3 2,651,035 - CA264_11435 0.77 -0.1 2,651,041 - CA264_11435 0.78 +0.1 2,651,105 + CA264_11435 0.82 -1.8 2,651,163 + CA264_11435 0.86 -0.6 2,651,165 + CA264_11435 0.87 -0.6 2,651,166 - CA264_11435 0.87 -0.0 2,651,187 - CA264_11435 0.88 -0.9 2,651,225 + -0.2 2,651,226 - -0.5 2,651,262 - -0.1 2,651,366 + -0.8 2,651,367 - -1.6 2,651,370 - -0.2 2,651,381 + -0.2 2,651,381 + -1.1 2,651,392 - -0.7 2,651,459 + +0.8 2,651,459 + -0.4 2,651,460 - +0.3 2,651,579 + -2.3 2,651,583 - -0.7 2,651,610 - CA264_11440 0.11 -0.3 2,651,646 - CA264_11440 0.13 -1.5 2,651,699 + CA264_11440 0.16 +1.0 2,651,753 + CA264_11440 0.19 -1.0 2,651,753 + CA264_11440 0.19 -1.5 2,651,773 + CA264_11440 0.20 -0.2 2,651,783 + CA264_11440 0.21 -1.0 2,651,840 + CA264_11440 0.24 +1.8 2,651,842 + CA264_11440 0.24 -2.0 2,651,843 - CA264_11440 0.24 +0.2 2,651,892 - CA264_11440 0.27 +0.4 2,651,898 - CA264_11440 0.27 -0.5 2,651,898 - CA264_11440 0.27 -0.3 2,651,899 + CA264_11440 0.27 +0.0 2,651,899 + CA264_11440 0.27 +0.6 2,651,962 + CA264_11440 0.31 -0.8 2,651,963 - CA264_11440 0.31 -1.0 2,651,963 - CA264_11440 0.31 +0.0 2,651,963 - CA264_11440 0.31 -0.7 2,651,965 + CA264_11440 0.31 +0.2 2,651,986 + CA264_11440 0.32 -0.8 2,651,986 + CA264_11440 0.32 -0.5 2,651,990 + CA264_11440 0.32 -0.4 2,651,990 + CA264_11440 0.32 -2.0 2,651,991 - CA264_11440 0.32 -1.9 2,652,008 + CA264_11440 0.33 +0.1 2,652,008 + CA264_11440 0.33 -0.1 2,652,008 + CA264_11440 0.33 -1.1 2,652,009 - CA264_11440 0.33 -0.4 2,652,009 - CA264_11440 0.33 -0.7 2,652,009 - CA264_11440 0.33 -0.5 2,652,020 - CA264_11440 0.34 -0.4 2,652,021 + CA264_11440 0.34 +0.0 2,652,021 + CA264_11440 0.34 -0.3 2,652,021 + CA264_11440 0.34 -0.4 2,652,021 + CA264_11440 0.34 -0.3 2,652,021 + CA264_11440 0.34 -0.5 2,652,021 + CA264_11440 0.34 -0.6 2,652,021 + CA264_11440 0.34 +0.0 2,652,021 + CA264_11440 0.34 -0.3 2,652,022 - CA264_11440 0.34 -0.6 2,652,022 - CA264_11440 0.34 -1.4 2,652,022 - CA264_11440 0.34 -1.5 2,652,025 + CA264_11440 0.34 -0.2 2,652,026 - CA264_11440 0.34 -0.1 2,652,038 + CA264_11440 0.35 +0.8 2,652,188 - CA264_11440 0.43 -0.3 2,652,192 - CA264_11440 0.44 +0.6 2,652,192 - CA264_11440 0.44 -0.6 2,652,197 - CA264_11440 0.44 +0.2 2,652,197 - CA264_11440 0.44 -0.1 2,652,251 + CA264_11440 0.47 -0.1
Or see this region's nucleotide sequence