Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11280 and CA264_11285 overlap by 14 nucleotides CA264_11285 and CA264_11290 are separated by 131 nucleotides CA264_11290 and CA264_11295 are separated by 366 nucleotides
CA264_11280: CA264_11280 - SCO family protein, at 2,611,628 to 2,612,311
_11280
CA264_11285: CA264_11285 - cytochrome c class I, at 2,612,298 to 2,612,705
_11285
CA264_11290: CA264_11290 - NADH pyrophosphatase, at 2,612,837 to 2,613,760
_11290
CA264_11295: CA264_11295 - hypothetical protein, at 2,614,127 to 2,614,855
_11295
Position (kb)
2612
2613
2614 Strain fitness (log2 ratio)
-2
-1
0
1 at 2611.883 kb on + strand, within CA264_11280 at 2611.965 kb on - strand, within CA264_11280 at 2612.318 kb on - strand at 2612.726 kb on + strand at 2612.727 kb on - strand at 2612.727 kb on - strand at 2612.839 kb on - strand at 2612.865 kb on + strand at 2612.865 kb on + strand at 2612.866 kb on - strand at 2613.003 kb on + strand, within CA264_11290 at 2613.004 kb on - strand, within CA264_11290 at 2613.008 kb on - strand, within CA264_11290 at 2613.090 kb on + strand, within CA264_11290 at 2613.090 kb on + strand, within CA264_11290 at 2613.090 kb on + strand, within CA264_11290 at 2613.090 kb on + strand, within CA264_11290 at 2613.091 kb on - strand, within CA264_11290 at 2613.091 kb on - strand, within CA264_11290 at 2613.096 kb on - strand, within CA264_11290 at 2613.097 kb on + strand, within CA264_11290 at 2613.192 kb on + strand, within CA264_11290 at 2613.193 kb on - strand, within CA264_11290 at 2613.193 kb on - strand, within CA264_11290 at 2613.193 kb on - strand, within CA264_11290 at 2613.193 kb on - strand, within CA264_11290 at 2613.193 kb on - strand, within CA264_11290 at 2613.193 kb on - strand, within CA264_11290 at 2613.250 kb on + strand, within CA264_11290 at 2613.254 kb on + strand, within CA264_11290 at 2613.310 kb on + strand, within CA264_11290 at 2613.342 kb on + strand, within CA264_11290 at 2613.343 kb on - strand, within CA264_11290 at 2613.347 kb on - strand, within CA264_11290 at 2613.347 kb on - strand, within CA264_11290 at 2613.552 kb on + strand, within CA264_11290 at 2613.641 kb on + strand, within CA264_11290 at 2613.641 kb on + strand, within CA264_11290 at 2613.642 kb on - strand, within CA264_11290 at 2613.642 kb on - strand, within CA264_11290 at 2613.663 kb on - strand, within CA264_11290 at 2613.735 kb on - strand at 2613.735 kb on - strand at 2613.764 kb on - strand at 2613.776 kb on - strand at 2613.776 kb on - strand at 2613.807 kb on + strand at 2613.866 kb on + strand at 2613.876 kb on + strand at 2613.877 kb on - strand at 2613.877 kb on - strand at 2613.880 kb on + strand at 2613.881 kb on - strand at 2613.882 kb on + strand at 2613.891 kb on - strand at 2613.912 kb on - strand at 2613.952 kb on - strand at 2613.976 kb on - strand at 2613.976 kb on - strand at 2613.976 kb on - strand at 2613.999 kb on + strand at 2614.000 kb on - strand at 2614.091 kb on - strand at 2614.106 kb on + strand at 2614.108 kb on + strand at 2614.109 kb on - strand at 2614.173 kb on + strand at 2614.173 kb on + strand at 2614.173 kb on + strand at 2614.174 kb on - strand at 2614.180 kb on + strand at 2614.181 kb on - strand at 2614.211 kb on - strand, within CA264_11295 at 2614.211 kb on - strand, within CA264_11295 at 2614.253 kb on + strand, within CA264_11295 at 2614.254 kb on - strand, within CA264_11295 at 2614.254 kb on - strand, within CA264_11295 at 2614.279 kb on + strand, within CA264_11295 at 2614.337 kb on - strand, within CA264_11295 at 2614.384 kb on + strand, within CA264_11295 at 2614.406 kb on - strand, within CA264_11295 at 2614.425 kb on + strand, within CA264_11295 at 2614.426 kb on - strand, within CA264_11295 at 2614.460 kb on + strand, within CA264_11295 at 2614.461 kb on - strand, within CA264_11295 at 2614.476 kb on + strand, within CA264_11295 at 2614.492 kb on + strand, within CA264_11295 at 2614.507 kb on - strand, within CA264_11295 at 2614.660 kb on + strand, within CA264_11295 at 2614.669 kb on + strand, within CA264_11295 at 2614.677 kb on + strand, within CA264_11295 at 2614.678 kb on - strand, within CA264_11295 at 2614.691 kb on + strand, within CA264_11295 at 2614.692 kb on - strand, within CA264_11295 at 2614.696 kb on + strand, within CA264_11295 at 2614.697 kb on - strand, within CA264_11295
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 2,611,883 + CA264_11280 0.37 +0.7 2,611,965 - CA264_11280 0.49 +1.0 2,612,318 - -0.6 2,612,726 + +0.1 2,612,727 - -0.8 2,612,727 - +0.9 2,612,839 - +1.3 2,612,865 + +0.3 2,612,865 + -0.1 2,612,866 - +0.3 2,613,003 + CA264_11290 0.18 +0.8 2,613,004 - CA264_11290 0.18 +0.6 2,613,008 - CA264_11290 0.19 +0.8 2,613,090 + CA264_11290 0.27 -0.2 2,613,090 + CA264_11290 0.27 +0.1 2,613,090 + CA264_11290 0.27 +0.0 2,613,090 + CA264_11290 0.27 -0.9 2,613,091 - CA264_11290 0.27 -1.4 2,613,091 - CA264_11290 0.27 +0.2 2,613,096 - CA264_11290 0.28 +0.5 2,613,097 + CA264_11290 0.28 -0.3 2,613,192 + CA264_11290 0.38 -2.0 2,613,193 - CA264_11290 0.39 +0.1 2,613,193 - CA264_11290 0.39 -0.4 2,613,193 - CA264_11290 0.39 -0.2 2,613,193 - CA264_11290 0.39 -0.5 2,613,193 - CA264_11290 0.39 -2.0 2,613,193 - CA264_11290 0.39 -0.1 2,613,250 + CA264_11290 0.45 -0.0 2,613,254 + CA264_11290 0.45 +0.3 2,613,310 + CA264_11290 0.51 +0.1 2,613,342 + CA264_11290 0.55 -0.5 2,613,343 - CA264_11290 0.55 -0.9 2,613,347 - CA264_11290 0.55 -1.2 2,613,347 - CA264_11290 0.55 -1.1 2,613,552 + CA264_11290 0.77 -0.8 2,613,641 + CA264_11290 0.87 +0.8 2,613,641 + CA264_11290 0.87 -0.4 2,613,642 - CA264_11290 0.87 +0.3 2,613,642 - CA264_11290 0.87 +0.6 2,613,663 - CA264_11290 0.89 -0.5 2,613,735 - -0.1 2,613,735 - +0.0 2,613,764 - +0.6 2,613,776 - -0.2 2,613,776 - -0.2 2,613,807 + -0.1 2,613,866 + -0.6 2,613,876 + +0.2 2,613,877 - +0.2 2,613,877 - -0.6 2,613,880 + +0.0 2,613,881 - -1.7 2,613,882 + -1.0 2,613,891 - -0.8 2,613,912 - -0.5 2,613,952 - -0.6 2,613,976 - -0.0 2,613,976 - -0.1 2,613,976 - -1.2 2,613,999 + +0.8 2,614,000 - -0.4 2,614,091 - -1.1 2,614,106 + -1.0 2,614,108 + -0.2 2,614,109 - -0.5 2,614,173 + -0.0 2,614,173 + -0.6 2,614,173 + +1.0 2,614,174 - -0.7 2,614,180 + +0.4 2,614,181 - -0.3 2,614,211 - CA264_11295 0.12 -1.6 2,614,211 - CA264_11295 0.12 +0.3 2,614,253 + CA264_11295 0.17 -0.5 2,614,254 - CA264_11295 0.17 +0.4 2,614,254 - CA264_11295 0.17 -1.4 2,614,279 + CA264_11295 0.21 -0.8 2,614,337 - CA264_11295 0.29 +1.3 2,614,384 + CA264_11295 0.35 -1.1 2,614,406 - CA264_11295 0.38 -0.1 2,614,425 + CA264_11295 0.41 -1.0 2,614,426 - CA264_11295 0.41 -0.7 2,614,460 + CA264_11295 0.46 +0.0 2,614,461 - CA264_11295 0.46 -0.8 2,614,476 + CA264_11295 0.48 -0.4 2,614,492 + CA264_11295 0.50 +0.2 2,614,507 - CA264_11295 0.52 -1.6 2,614,660 + CA264_11295 0.73 -0.3 2,614,669 + CA264_11295 0.74 -1.8 2,614,677 + CA264_11295 0.75 -0.7 2,614,678 - CA264_11295 0.76 -0.7 2,614,691 + CA264_11295 0.77 +0.6 2,614,692 - CA264_11295 0.78 -1.7 2,614,696 + CA264_11295 0.78 -1.2 2,614,697 - CA264_11295 0.78 -2.1
Or see this region's nucleotide sequence