Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10635 and CA264_10640 are separated by 155 nucleotides CA264_10640 and CA264_10645 are separated by 386 nucleotides CA264_10645 and CA264_10650 are separated by 300 nucleotides CA264_10650 and CA264_10655 are separated by 86 nucleotides
CA264_10635: CA264_10635 - NADPH:quinone reductase, at 2,458,109 to 2,459,107
_10635
CA264_10640: CA264_10640 - transcriptional regulator, at 2,459,263 to 2,459,616
_10640
CA264_10645: CA264_10645 - hypothetical protein, at 2,460,003 to 2,461,289
_10645
CA264_10650: CA264_10650 - hypothetical protein, at 2,461,590 to 2,462,015
_10650
CA264_10655: CA264_10655 - hypothetical protein, at 2,462,102 to 2,462,824
_10655
Position (kb)
2460
2461
2462 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2459.012 kb on - strand at 2459.108 kb on + strand at 2459.114 kb on - strand at 2459.135 kb on + strand at 2459.221 kb on - strand at 2459.239 kb on - strand at 2459.341 kb on + strand, within CA264_10640 at 2459.342 kb on - strand, within CA264_10640 at 2459.362 kb on + strand, within CA264_10640 at 2459.379 kb on + strand, within CA264_10640 at 2459.424 kb on + strand, within CA264_10640 at 2459.425 kb on - strand, within CA264_10640 at 2459.471 kb on + strand, within CA264_10640 at 2459.471 kb on + strand, within CA264_10640 at 2459.472 kb on - strand, within CA264_10640 at 2459.487 kb on - strand, within CA264_10640 at 2459.510 kb on + strand, within CA264_10640 at 2459.510 kb on + strand, within CA264_10640 at 2459.515 kb on + strand, within CA264_10640 at 2459.516 kb on - strand, within CA264_10640 at 2459.516 kb on - strand, within CA264_10640 at 2459.614 kb on + strand at 2459.618 kb on + strand at 2459.656 kb on - strand at 2459.658 kb on + strand at 2459.658 kb on + strand at 2459.658 kb on + strand at 2459.663 kb on + strand at 2459.670 kb on + strand at 2459.670 kb on + strand at 2459.671 kb on - strand at 2459.671 kb on - strand at 2459.671 kb on - strand at 2459.688 kb on + strand at 2459.738 kb on + strand at 2459.739 kb on - strand at 2459.750 kb on + strand at 2459.757 kb on + strand at 2459.757 kb on + strand at 2459.817 kb on - strand at 2459.840 kb on - strand at 2459.845 kb on + strand at 2459.850 kb on - strand at 2459.850 kb on - strand at 2459.850 kb on - strand at 2459.850 kb on - strand at 2459.861 kb on - strand at 2459.861 kb on - strand at 2459.863 kb on + strand at 2459.864 kb on - strand at 2459.864 kb on - strand at 2459.868 kb on - strand at 2459.874 kb on - strand at 2459.915 kb on - strand at 2459.990 kb on + strand at 2459.994 kb on - strand at 2459.999 kb on + strand at 2459.999 kb on + strand at 2460.000 kb on - strand at 2460.000 kb on - strand at 2460.093 kb on + strand at 2460.185 kb on + strand, within CA264_10645 at 2460.186 kb on - strand, within CA264_10645 at 2460.202 kb on - strand, within CA264_10645 at 2460.220 kb on + strand, within CA264_10645 at 2460.265 kb on - strand, within CA264_10645 at 2460.266 kb on + strand, within CA264_10645 at 2460.267 kb on - strand, within CA264_10645 at 2460.267 kb on - strand, within CA264_10645 at 2460.282 kb on - strand, within CA264_10645 at 2460.293 kb on + strand, within CA264_10645 at 2460.308 kb on + strand, within CA264_10645 at 2460.313 kb on - strand, within CA264_10645 at 2460.313 kb on - strand, within CA264_10645 at 2460.313 kb on - strand, within CA264_10645 at 2460.315 kb on + strand, within CA264_10645 at 2460.315 kb on + strand, within CA264_10645 at 2460.316 kb on - strand, within CA264_10645 at 2460.334 kb on + strand, within CA264_10645 at 2460.334 kb on + strand, within CA264_10645 at 2460.335 kb on - strand, within CA264_10645 at 2460.352 kb on - strand, within CA264_10645 at 2460.375 kb on - strand, within CA264_10645 at 2460.375 kb on - strand, within CA264_10645 at 2460.384 kb on + strand, within CA264_10645 at 2460.384 kb on + strand, within CA264_10645 at 2460.384 kb on + strand, within CA264_10645 at 2460.385 kb on - strand, within CA264_10645 at 2460.385 kb on - strand, within CA264_10645 at 2460.483 kb on + strand, within CA264_10645 at 2460.512 kb on - strand, within CA264_10645 at 2460.586 kb on - strand, within CA264_10645 at 2460.639 kb on + strand, within CA264_10645 at 2460.642 kb on + strand, within CA264_10645 at 2460.650 kb on + strand, within CA264_10645 at 2460.651 kb on - strand, within CA264_10645 at 2460.707 kb on + strand, within CA264_10645 at 2460.753 kb on + strand, within CA264_10645 at 2460.848 kb on + strand, within CA264_10645 at 2460.852 kb on + strand, within CA264_10645 at 2460.852 kb on + strand, within CA264_10645 at 2460.870 kb on + strand, within CA264_10645 at 2460.892 kb on + strand, within CA264_10645 at 2460.938 kb on + strand, within CA264_10645 at 2460.938 kb on + strand, within CA264_10645 at 2460.961 kb on - strand, within CA264_10645 at 2461.130 kb on + strand, within CA264_10645 at 2461.165 kb on + strand at 2461.231 kb on + strand at 2461.231 kb on + strand at 2461.232 kb on - strand at 2461.286 kb on - strand at 2461.286 kb on - strand at 2461.310 kb on + strand at 2461.311 kb on - strand at 2461.311 kb on - strand at 2461.460 kb on + strand at 2461.461 kb on - strand at 2461.487 kb on - strand at 2461.508 kb on + strand at 2461.567 kb on + strand at 2461.572 kb on + strand at 2461.590 kb on - strand at 2461.604 kb on - strand at 2461.708 kb on + strand, within CA264_10650 at 2461.728 kb on - strand, within CA264_10650 at 2461.749 kb on - strand, within CA264_10650 at 2461.754 kb on - strand, within CA264_10650 at 2461.774 kb on + strand, within CA264_10650 at 2461.807 kb on + strand, within CA264_10650 at 2461.808 kb on - strand, within CA264_10650 at 2461.817 kb on - strand, within CA264_10650 at 2461.817 kb on - strand, within CA264_10650 at 2461.871 kb on - strand, within CA264_10650 at 2461.875 kb on - strand, within CA264_10650 at 2461.944 kb on + strand, within CA264_10650 at 2461.944 kb on + strand, within CA264_10650 at 2461.944 kb on + strand, within CA264_10650 at 2461.946 kb on + strand, within CA264_10650 at 2461.982 kb on - strand at 2462.013 kb on + strand at 2462.032 kb on - strand at 2462.115 kb on + strand at 2462.184 kb on + strand, within CA264_10655 at 2462.276 kb on + strand, within CA264_10655
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 2,459,012 - -0.2 2,459,108 + -1.2 2,459,114 - +0.8 2,459,135 + -0.8 2,459,221 - -0.3 2,459,239 - +0.2 2,459,341 + CA264_10640 0.22 -0.3 2,459,342 - CA264_10640 0.22 +0.3 2,459,362 + CA264_10640 0.28 +0.2 2,459,379 + CA264_10640 0.33 -1.4 2,459,424 + CA264_10640 0.45 -0.8 2,459,425 - CA264_10640 0.46 -0.8 2,459,471 + CA264_10640 0.59 +0.5 2,459,471 + CA264_10640 0.59 -0.6 2,459,472 - CA264_10640 0.59 -1.2 2,459,487 - CA264_10640 0.63 -1.0 2,459,510 + CA264_10640 0.70 +0.4 2,459,510 + CA264_10640 0.70 -0.3 2,459,515 + CA264_10640 0.71 +1.0 2,459,516 - CA264_10640 0.71 +0.3 2,459,516 - CA264_10640 0.71 -0.1 2,459,614 + +0.2 2,459,618 + +0.8 2,459,656 - -0.0 2,459,658 + -0.5 2,459,658 + -0.6 2,459,658 + +0.2 2,459,663 + +0.2 2,459,670 + -0.9 2,459,670 + +1.9 2,459,671 - +0.7 2,459,671 - -1.0 2,459,671 - -0.9 2,459,688 + +0.8 2,459,738 + +0.0 2,459,739 - -1.7 2,459,750 + -0.3 2,459,757 + -0.4 2,459,757 + +0.1 2,459,817 - -0.7 2,459,840 - -1.8 2,459,845 + -1.2 2,459,850 - -1.5 2,459,850 - +1.0 2,459,850 - +0.6 2,459,850 - +0.7 2,459,861 - +0.5 2,459,861 - +0.5 2,459,863 + -0.8 2,459,864 - +0.3 2,459,864 - +0.1 2,459,868 - -0.6 2,459,874 - +0.1 2,459,915 - +1.3 2,459,990 + +0.3 2,459,994 - +0.1 2,459,999 + -0.6 2,459,999 + -0.6 2,460,000 - +0.1 2,460,000 - -1.2 2,460,093 + +0.0 2,460,185 + CA264_10645 0.14 +0.6 2,460,186 - CA264_10645 0.14 -0.5 2,460,202 - CA264_10645 0.15 -1.4 2,460,220 + CA264_10645 0.17 -0.2 2,460,265 - CA264_10645 0.20 +0.3 2,460,266 + CA264_10645 0.20 -1.0 2,460,267 - CA264_10645 0.21 -1.5 2,460,267 - CA264_10645 0.21 +1.1 2,460,282 - CA264_10645 0.22 -0.7 2,460,293 + CA264_10645 0.23 +0.3 2,460,308 + CA264_10645 0.24 -0.5 2,460,313 - CA264_10645 0.24 +0.0 2,460,313 - CA264_10645 0.24 -0.6 2,460,313 - CA264_10645 0.24 +0.2 2,460,315 + CA264_10645 0.24 -0.3 2,460,315 + CA264_10645 0.24 +2.0 2,460,316 - CA264_10645 0.24 -1.6 2,460,334 + CA264_10645 0.26 -0.1 2,460,334 + CA264_10645 0.26 -1.1 2,460,335 - CA264_10645 0.26 +0.2 2,460,352 - CA264_10645 0.27 +0.1 2,460,375 - CA264_10645 0.29 -0.1 2,460,375 - CA264_10645 0.29 +1.5 2,460,384 + CA264_10645 0.30 +0.4 2,460,384 + CA264_10645 0.30 +0.9 2,460,384 + CA264_10645 0.30 +0.2 2,460,385 - CA264_10645 0.30 -0.3 2,460,385 - CA264_10645 0.30 -0.2 2,460,483 + CA264_10645 0.37 +0.1 2,460,512 - CA264_10645 0.40 +0.1 2,460,586 - CA264_10645 0.45 +1.9 2,460,639 + CA264_10645 0.49 +0.7 2,460,642 + CA264_10645 0.50 +0.5 2,460,650 + CA264_10645 0.50 +0.4 2,460,651 - CA264_10645 0.50 +1.7 2,460,707 + CA264_10645 0.55 -0.2 2,460,753 + CA264_10645 0.58 -0.2 2,460,848 + CA264_10645 0.66 -0.3 2,460,852 + CA264_10645 0.66 +0.9 2,460,852 + CA264_10645 0.66 -1.1 2,460,870 + CA264_10645 0.67 -0.0 2,460,892 + CA264_10645 0.69 +0.7 2,460,938 + CA264_10645 0.73 +0.4 2,460,938 + CA264_10645 0.73 -0.3 2,460,961 - CA264_10645 0.74 -0.5 2,461,130 + CA264_10645 0.88 +0.1 2,461,165 + -0.3 2,461,231 + -0.2 2,461,231 + +0.2 2,461,232 - +0.5 2,461,286 - -0.7 2,461,286 - -0.4 2,461,310 + +0.2 2,461,311 - +0.0 2,461,311 - -0.5 2,461,460 + -1.1 2,461,461 - +0.9 2,461,487 - -0.0 2,461,508 + +0.2 2,461,567 + -0.8 2,461,572 + -2.0 2,461,590 - -0.9 2,461,604 - -2.0 2,461,708 + CA264_10650 0.28 +0.1 2,461,728 - CA264_10650 0.32 -0.5 2,461,749 - CA264_10650 0.37 +0.1 2,461,754 - CA264_10650 0.38 -0.8 2,461,774 + CA264_10650 0.43 -0.6 2,461,807 + CA264_10650 0.51 -0.1 2,461,808 - CA264_10650 0.51 -0.3 2,461,817 - CA264_10650 0.53 -1.8 2,461,817 - CA264_10650 0.53 -0.0 2,461,871 - CA264_10650 0.66 +2.1 2,461,875 - CA264_10650 0.67 -0.7 2,461,944 + CA264_10650 0.83 -0.0 2,461,944 + CA264_10650 0.83 -0.0 2,461,944 + CA264_10650 0.83 +0.2 2,461,946 + CA264_10650 0.84 -0.2 2,461,982 - +0.5 2,462,013 + -0.5 2,462,032 - +0.3 2,462,115 + +0.4 2,462,184 + CA264_10655 0.11 +0.7 2,462,276 + CA264_10655 0.24 -0.3
Or see this region's nucleotide sequence