Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_09905

Experiment: m.b. Chloride 750 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_09900 and CA264_09905 overlap by 4 nucleotidesCA264_09905 and CA264_09910 are separated by 191 nucleotides CA264_09900: CA264_09900 - hypothetical protein, at 2,306,343 to 2,309,585 _09900 CA264_09905: CA264_09905 - hypothetical protein, at 2,309,582 to 2,310,607 _09905 CA264_09910: CA264_09910 - hypothetical protein, at 2,310,799 to 2,311,374 _09910 Position (kb) 2309 2310 2311Strain fitness (log2 ratio) -2 -1 0 1at 2308.590 kb on - strand, within CA264_09900at 2308.624 kb on + strand, within CA264_09900at 2308.626 kb on + strand, within CA264_09900at 2308.626 kb on + strand, within CA264_09900at 2308.654 kb on - strand, within CA264_09900at 2308.747 kb on + strand, within CA264_09900at 2308.748 kb on - strand, within CA264_09900at 2309.026 kb on - strandat 2309.074 kb on - strand, within CA264_09900at 2309.091 kb on - strand, within CA264_09900at 2309.098 kb on + strand, within CA264_09900at 2309.099 kb on - strand, within CA264_09900at 2309.141 kb on + strand, within CA264_09900at 2309.285 kb on + strandat 2309.286 kb on - strandat 2309.286 kb on - strandat 2309.315 kb on - strandat 2309.437 kb on + strandat 2309.437 kb on + strandat 2309.490 kb on + strandat 2309.490 kb on + strandat 2309.491 kb on - strandat 2309.491 kb on - strandat 2309.565 kb on + strandat 2309.565 kb on + strandat 2309.566 kb on - strandat 2309.566 kb on - strandat 2309.586 kb on - strandat 2309.586 kb on - strandat 2309.587 kb on + strandat 2309.587 kb on + strandat 2309.587 kb on + strandat 2309.588 kb on - strandat 2309.588 kb on - strandat 2309.594 kb on - strandat 2309.597 kb on - strandat 2309.611 kb on + strandat 2309.611 kb on + strandat 2309.615 kb on + strandat 2309.619 kb on + strandat 2309.619 kb on + strandat 2309.620 kb on - strandat 2309.620 kb on - strandat 2309.675 kb on + strandat 2309.675 kb on + strandat 2309.675 kb on + strandat 2309.723 kb on - strand, within CA264_09905at 2309.742 kb on - strand, within CA264_09905at 2309.760 kb on + strand, within CA264_09905at 2309.810 kb on + strand, within CA264_09905at 2309.890 kb on + strand, within CA264_09905at 2309.891 kb on - strand, within CA264_09905at 2309.891 kb on - strand, within CA264_09905at 2309.891 kb on - strand, within CA264_09905at 2309.917 kb on + strand, within CA264_09905at 2310.036 kb on - strand, within CA264_09905at 2310.036 kb on - strand, within CA264_09905at 2310.039 kb on - strand, within CA264_09905at 2310.039 kb on - strand, within CA264_09905at 2310.039 kb on - strand, within CA264_09905at 2310.085 kb on + strand, within CA264_09905at 2310.085 kb on + strand, within CA264_09905at 2310.096 kb on - strand, within CA264_09905at 2310.159 kb on + strand, within CA264_09905at 2310.159 kb on + strand, within CA264_09905at 2310.160 kb on - strand, within CA264_09905at 2310.160 kb on - strand, within CA264_09905at 2310.160 kb on - strand, within CA264_09905at 2310.172 kb on + strand, within CA264_09905at 2310.188 kb on + strand, within CA264_09905at 2310.234 kb on - strand, within CA264_09905at 2310.317 kb on + strand, within CA264_09905at 2310.318 kb on - strand, within CA264_09905at 2310.318 kb on - strand, within CA264_09905at 2310.330 kb on - strand, within CA264_09905at 2310.587 kb on + strandat 2310.587 kb on + strandat 2310.588 kb on - strandat 2310.588 kb on - strandat 2310.592 kb on + strandat 2310.592 kb on + strandat 2310.592 kb on + strandat 2310.592 kb on + strandat 2310.593 kb on - strandat 2310.663 kb on - strandat 2310.681 kb on - strandat 2310.697 kb on + strandat 2310.795 kb on + strandat 2310.800 kb on + strandat 2310.800 kb on + strandat 2310.800 kb on + strandat 2310.806 kb on - strandat 2310.806 kb on - strandat 2310.910 kb on - strand, within CA264_09910at 2310.913 kb on + strand, within CA264_09910at 2310.918 kb on - strand, within CA264_09910at 2311.096 kb on - strand, within CA264_09910at 2311.098 kb on - strand, within CA264_09910at 2311.098 kb on - strand, within CA264_09910at 2311.108 kb on - strand, within CA264_09910at 2311.109 kb on + strand, within CA264_09910at 2311.146 kb on - strand, within CA264_09910at 2311.146 kb on - strand, within CA264_09910at 2311.172 kb on - strand, within CA264_09910at 2311.197 kb on + strand, within CA264_09910at 2311.198 kb on - strand, within CA264_09910at 2311.374 kb on + strandat 2311.374 kb on + strandat 2311.374 kb on + strandat 2311.375 kb on - strandat 2311.375 kb on - strandat 2311.375 kb on - strandat 2311.375 kb on - strandat 2311.375 kb on - strandat 2311.375 kb on - strandat 2311.378 kb on + strandat 2311.378 kb on + strandat 2311.379 kb on - strandat 2311.414 kb on + strandat 2311.414 kb on + strandat 2311.415 kb on - strandat 2311.452 kb on + strandat 2311.453 kb on - strandat 2311.567 kb on + strandat 2311.568 kb on - strandat 2311.568 kb on - strandat 2311.568 kb on - strandat 2311.568 kb on - strandat 2311.568 kb on - strandat 2311.568 kb on - strandat 2311.568 kb on - strandat 2311.606 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM
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2,308,590 - CA264_09900 0.69 +0.0
2,308,624 + CA264_09900 0.70 -0.3
2,308,626 + CA264_09900 0.70 +0.6
2,308,626 + CA264_09900 0.70 -0.4
2,308,654 - CA264_09900 0.71 -0.4
2,308,747 + CA264_09900 0.74 -0.6
2,308,748 - CA264_09900 0.74 -0.5
2,309,026 - +1.3
2,309,074 - CA264_09900 0.84 +0.8
2,309,091 - CA264_09900 0.85 +1.0
2,309,098 + CA264_09900 0.85 -0.7
2,309,099 - CA264_09900 0.85 +0.3
2,309,141 + CA264_09900 0.86 -0.1
2,309,285 + -0.2
2,309,286 - +1.0
2,309,286 - +0.4
2,309,315 - -1.4
2,309,437 + +1.6
2,309,437 + +0.0
2,309,490 + +0.0
2,309,490 + -1.0
2,309,491 - -0.7
2,309,491 - -1.5
2,309,565 + +0.1
2,309,565 + -0.7
2,309,566 - -0.2
2,309,566 - -1.9
2,309,586 - +0.0
2,309,586 - -0.6
2,309,587 + +1.1
2,309,587 + -0.1
2,309,587 + -1.1
2,309,588 - -0.2
2,309,588 - -0.2
2,309,594 - -0.3
2,309,597 - +1.3
2,309,611 + -1.1
2,309,611 + -1.0
2,309,615 + +0.5
2,309,619 + -0.2
2,309,619 + +0.6
2,309,620 - +0.6
2,309,620 - +0.0
2,309,675 + -0.5
2,309,675 + +0.0
2,309,675 + +0.2
2,309,723 - CA264_09905 0.14 -1.4
2,309,742 - CA264_09905 0.16 +0.7
2,309,760 + CA264_09905 0.17 +0.2
2,309,810 + CA264_09905 0.22 -1.5
2,309,890 + CA264_09905 0.30 -0.3
2,309,891 - CA264_09905 0.30 -0.9
2,309,891 - CA264_09905 0.30 +0.1
2,309,891 - CA264_09905 0.30 +0.2
2,309,917 + CA264_09905 0.33 -0.1
2,310,036 - CA264_09905 0.44 +0.4
2,310,036 - CA264_09905 0.44 -0.4
2,310,039 - CA264_09905 0.45 -0.6
2,310,039 - CA264_09905 0.45 -0.0
2,310,039 - CA264_09905 0.45 +0.3
2,310,085 + CA264_09905 0.49 -0.5
2,310,085 + CA264_09905 0.49 -1.1
2,310,096 - CA264_09905 0.50 -0.5
2,310,159 + CA264_09905 0.56 -0.1
2,310,159 + CA264_09905 0.56 -2.0
2,310,160 - CA264_09905 0.56 -0.3
2,310,160 - CA264_09905 0.56 -0.4
2,310,160 - CA264_09905 0.56 -0.1
2,310,172 + CA264_09905 0.58 +0.6
2,310,188 + CA264_09905 0.59 -1.3
2,310,234 - CA264_09905 0.64 -0.8
2,310,317 + CA264_09905 0.72 +0.1
2,310,318 - CA264_09905 0.72 -0.1
2,310,318 - CA264_09905 0.72 +0.3
2,310,330 - CA264_09905 0.73 -1.0
2,310,587 + -0.3
2,310,587 + -0.0
2,310,588 - +0.1
2,310,588 - -0.4
2,310,592 + -0.5
2,310,592 + -0.1
2,310,592 + -0.4
2,310,592 + -0.6
2,310,593 - -1.1
2,310,663 - +1.7
2,310,681 - -2.1
2,310,697 + -0.1
2,310,795 + +0.2
2,310,800 + +0.7
2,310,800 + -0.9
2,310,800 + +0.1
2,310,806 - -0.8
2,310,806 - -1.0
2,310,910 - CA264_09910 0.19 -1.1
2,310,913 + CA264_09910 0.20 -1.1
2,310,918 - CA264_09910 0.21 -0.7
2,311,096 - CA264_09910 0.52 -0.8
2,311,098 - CA264_09910 0.52 -0.6
2,311,098 - CA264_09910 0.52 +0.1
2,311,108 - CA264_09910 0.54 -1.5
2,311,109 + CA264_09910 0.54 +0.1
2,311,146 - CA264_09910 0.60 -0.3
2,311,146 - CA264_09910 0.60 -0.3
2,311,172 - CA264_09910 0.65 +0.9
2,311,197 + CA264_09910 0.69 -0.1
2,311,198 - CA264_09910 0.69 +0.3
2,311,374 + -0.1
2,311,374 + -0.4
2,311,374 + -0.8
2,311,375 - +0.4
2,311,375 - -0.6
2,311,375 - +0.0
2,311,375 - -1.4
2,311,375 - -1.1
2,311,375 - +1.0
2,311,378 + +1.0
2,311,378 + +0.1
2,311,379 - -1.1
2,311,414 + -1.2
2,311,414 + -1.0
2,311,415 - -0.2
2,311,452 + -0.4
2,311,453 - -0.7
2,311,567 + -0.4
2,311,568 - -2.2
2,311,568 - +0.0
2,311,568 - -0.0
2,311,568 - -0.6
2,311,568 - -0.3
2,311,568 - -1.2
2,311,568 - -0.9
2,311,606 + -0.2

Or see this region's nucleotide sequence