Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09810 and CA264_09815 are separated by 8 nucleotides CA264_09815 and CA264_09820 are separated by 11 nucleotides CA264_09820 and CA264_09825 are separated by 83 nucleotides
CA264_09810: CA264_09810 - ABC transporter ATP-binding protein, at 2,279,308 to 2,281,584
_09810
CA264_09815: CA264_09815 - hypothetical protein, at 2,281,593 to 2,281,775
_09815
CA264_09820: CA264_09820 - hypothetical protein, at 2,281,787 to 2,281,984
_09820
CA264_09825: CA264_09825 - hypothetical protein, at 2,282,068 to 2,284,521
_09825
Position (kb)
2281
2282 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2280.820 kb on - strand, within CA264_09810 at 2280.823 kb on + strand, within CA264_09810 at 2280.824 kb on - strand, within CA264_09810 at 2280.824 kb on - strand, within CA264_09810 at 2280.828 kb on + strand, within CA264_09810 at 2280.829 kb on - strand, within CA264_09810 at 2280.829 kb on - strand, within CA264_09810 at 2280.932 kb on + strand, within CA264_09810 at 2280.933 kb on - strand, within CA264_09810 at 2280.933 kb on - strand, within CA264_09810 at 2281.006 kb on - strand, within CA264_09810 at 2281.006 kb on - strand, within CA264_09810 at 2281.036 kb on + strand, within CA264_09810 at 2281.036 kb on + strand, within CA264_09810 at 2281.036 kb on + strand, within CA264_09810 at 2281.037 kb on - strand, within CA264_09810 at 2281.049 kb on + strand, within CA264_09810 at 2281.049 kb on + strand, within CA264_09810 at 2281.050 kb on - strand, within CA264_09810 at 2281.050 kb on - strand, within CA264_09810 at 2281.050 kb on - strand, within CA264_09810 at 2281.050 kb on - strand, within CA264_09810 at 2281.050 kb on - strand, within CA264_09810 at 2281.050 kb on - strand, within CA264_09810 at 2281.058 kb on + strand, within CA264_09810 at 2281.066 kb on + strand, within CA264_09810 at 2281.067 kb on - strand, within CA264_09810 at 2281.067 kb on - strand, within CA264_09810 at 2281.067 kb on - strand, within CA264_09810 at 2281.067 kb on - strand, within CA264_09810 at 2281.071 kb on - strand, within CA264_09810 at 2281.071 kb on - strand, within CA264_09810 at 2281.176 kb on + strand, within CA264_09810 at 2281.177 kb on - strand, within CA264_09810 at 2281.191 kb on + strand, within CA264_09810 at 2281.191 kb on + strand, within CA264_09810 at 2281.252 kb on + strand, within CA264_09810 at 2281.253 kb on - strand, within CA264_09810 at 2281.258 kb on + strand, within CA264_09810 at 2281.258 kb on + strand, within CA264_09810 at 2281.259 kb on - strand, within CA264_09810 at 2281.259 kb on - strand, within CA264_09810 at 2281.301 kb on + strand, within CA264_09810 at 2281.302 kb on - strand, within CA264_09810 at 2281.302 kb on - strand, within CA264_09810 at 2281.306 kb on + strand, within CA264_09810 at 2281.306 kb on + strand, within CA264_09810 at 2281.306 kb on + strand, within CA264_09810 at 2281.306 kb on + strand, within CA264_09810 at 2281.339 kb on - strand, within CA264_09810 at 2281.373 kb on + strand at 2281.373 kb on + strand at 2281.427 kb on - strand at 2281.479 kb on - strand at 2281.490 kb on + strand at 2281.548 kb on - strand at 2281.548 kb on - strand at 2281.561 kb on - strand at 2281.562 kb on + strand at 2281.572 kb on - strand at 2281.572 kb on - strand at 2281.575 kb on + strand at 2281.594 kb on + strand at 2281.610 kb on + strand at 2281.695 kb on + strand, within CA264_09815 at 2281.695 kb on + strand, within CA264_09815 at 2281.713 kb on + strand, within CA264_09815 at 2281.714 kb on - strand, within CA264_09815 at 2281.779 kb on + strand at 2281.789 kb on - strand at 2281.814 kb on + strand, within CA264_09820 at 2281.814 kb on + strand, within CA264_09820 at 2281.860 kb on + strand, within CA264_09820 at 2281.861 kb on - strand, within CA264_09820 at 2281.875 kb on + strand, within CA264_09820 at 2281.900 kb on + strand, within CA264_09820 at 2281.934 kb on + strand, within CA264_09820 at 2281.935 kb on - strand, within CA264_09820 at 2282.001 kb on + strand at 2282.038 kb on - strand at 2282.069 kb on + strand at 2282.070 kb on - strand at 2282.163 kb on - strand at 2282.174 kb on - strand at 2282.178 kb on + strand at 2282.179 kb on - strand at 2282.179 kb on - strand at 2282.181 kb on - strand at 2282.181 kb on - strand at 2282.181 kb on - strand at 2282.360 kb on + strand, within CA264_09825 at 2282.360 kb on + strand, within CA264_09825 at 2282.362 kb on + strand, within CA264_09825 at 2282.362 kb on + strand, within CA264_09825 at 2282.381 kb on + strand, within CA264_09825 at 2282.415 kb on + strand, within CA264_09825 at 2282.429 kb on + strand, within CA264_09825 at 2282.457 kb on + strand, within CA264_09825 at 2282.457 kb on + strand, within CA264_09825 at 2282.603 kb on + strand, within CA264_09825 at 2282.632 kb on - strand, within CA264_09825 at 2282.632 kb on - strand, within CA264_09825 at 2282.635 kb on + strand, within CA264_09825 at 2282.635 kb on + strand, within CA264_09825 at 2282.635 kb on + strand, within CA264_09825 at 2282.635 kb on + strand, within CA264_09825 at 2282.635 kb on + strand, within CA264_09825 at 2282.636 kb on - strand, within CA264_09825 at 2282.669 kb on + strand, within CA264_09825 at 2282.718 kb on + strand, within CA264_09825 at 2282.718 kb on + strand, within CA264_09825 at 2282.720 kb on + strand, within CA264_09825 at 2282.721 kb on - strand, within CA264_09825 at 2282.721 kb on - strand, within CA264_09825 at 2282.721 kb on - strand, within CA264_09825 at 2282.721 kb on - strand, within CA264_09825 at 2282.730 kb on + strand, within CA264_09825 at 2282.731 kb on - strand, within CA264_09825 at 2282.731 kb on - strand, within CA264_09825 at 2282.731 kb on - strand, within CA264_09825 at 2282.732 kb on + strand, within CA264_09825 at 2282.762 kb on + strand, within CA264_09825 at 2282.762 kb on + strand, within CA264_09825 at 2282.775 kb on - strand, within CA264_09825 at 2282.780 kb on + strand, within CA264_09825 at 2282.780 kb on + strand, within CA264_09825 at 2282.780 kb on + strand, within CA264_09825 at 2282.781 kb on - strand, within CA264_09825 at 2282.781 kb on - strand, within CA264_09825 at 2282.781 kb on - strand, within CA264_09825 at 2282.826 kb on + strand, within CA264_09825 at 2282.828 kb on + strand, within CA264_09825 at 2282.831 kb on + strand, within CA264_09825 at 2282.832 kb on - strand, within CA264_09825 at 2282.871 kb on - strand, within CA264_09825 at 2282.876 kb on - strand, within CA264_09825 at 2282.927 kb on + strand, within CA264_09825 at 2282.928 kb on - strand, within CA264_09825 at 2282.928 kb on - strand, within CA264_09825 at 2282.928 kb on - strand, within CA264_09825 at 2282.932 kb on + strand, within CA264_09825 at 2282.932 kb on + strand, within CA264_09825 at 2282.932 kb on + strand, within CA264_09825 at 2282.932 kb on + strand, within CA264_09825 at 2282.932 kb on + strand, within CA264_09825 at 2282.972 kb on - strand, within CA264_09825
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 2,280,820 - CA264_09810 0.66 -1.1 2,280,823 + CA264_09810 0.67 +1.5 2,280,824 - CA264_09810 0.67 +0.3 2,280,824 - CA264_09810 0.67 -3.6 2,280,828 + CA264_09810 0.67 +1.5 2,280,829 - CA264_09810 0.67 -1.0 2,280,829 - CA264_09810 0.67 -2.1 2,280,932 + CA264_09810 0.71 -1.1 2,280,933 - CA264_09810 0.71 -1.1 2,280,933 - CA264_09810 0.71 -0.6 2,281,006 - CA264_09810 0.75 -1.1 2,281,006 - CA264_09810 0.75 -0.3 2,281,036 + CA264_09810 0.76 -1.7 2,281,036 + CA264_09810 0.76 -3.4 2,281,036 + CA264_09810 0.76 -2.3 2,281,037 - CA264_09810 0.76 -1.9 2,281,049 + CA264_09810 0.76 +0.6 2,281,049 + CA264_09810 0.76 -2.0 2,281,050 - CA264_09810 0.77 -0.7 2,281,050 - CA264_09810 0.77 +1.1 2,281,050 - CA264_09810 0.77 -1.4 2,281,050 - CA264_09810 0.77 -1.0 2,281,050 - CA264_09810 0.77 -1.2 2,281,050 - CA264_09810 0.77 -0.7 2,281,058 + CA264_09810 0.77 -1.3 2,281,066 + CA264_09810 0.77 -1.0 2,281,067 - CA264_09810 0.77 +0.7 2,281,067 - CA264_09810 0.77 -0.6 2,281,067 - CA264_09810 0.77 -0.1 2,281,067 - CA264_09810 0.77 -0.8 2,281,071 - CA264_09810 0.77 -0.6 2,281,071 - CA264_09810 0.77 +0.8 2,281,176 + CA264_09810 0.82 -2.5 2,281,177 - CA264_09810 0.82 -1.2 2,281,191 + CA264_09810 0.83 -1.9 2,281,191 + CA264_09810 0.83 -0.4 2,281,252 + CA264_09810 0.85 -2.5 2,281,253 - CA264_09810 0.85 -2.5 2,281,258 + CA264_09810 0.86 +0.4 2,281,258 + CA264_09810 0.86 -1.7 2,281,259 - CA264_09810 0.86 -1.1 2,281,259 - CA264_09810 0.86 -1.5 2,281,301 + CA264_09810 0.88 -1.3 2,281,302 - CA264_09810 0.88 -1.0 2,281,302 - CA264_09810 0.88 -2.3 2,281,306 + CA264_09810 0.88 -0.9 2,281,306 + CA264_09810 0.88 -0.8 2,281,306 + CA264_09810 0.88 -1.1 2,281,306 + CA264_09810 0.88 -1.5 2,281,339 - CA264_09810 0.89 -2.5 2,281,373 + -0.5 2,281,373 + -0.8 2,281,427 - -2.4 2,281,479 - -1.6 2,281,490 + -0.5 2,281,548 - -1.1 2,281,548 - -1.6 2,281,561 - -1.1 2,281,562 + -0.1 2,281,572 - -1.2 2,281,572 - -0.4 2,281,575 + -1.4 2,281,594 + -1.1 2,281,610 + -0.7 2,281,695 + CA264_09815 0.56 +0.6 2,281,695 + CA264_09815 0.56 +1.1 2,281,713 + CA264_09815 0.66 -0.3 2,281,714 - CA264_09815 0.66 -0.1 2,281,779 + -0.8 2,281,789 - -0.2 2,281,814 + CA264_09820 0.14 +0.1 2,281,814 + CA264_09820 0.14 +0.3 2,281,860 + CA264_09820 0.37 -0.5 2,281,861 - CA264_09820 0.37 -0.3 2,281,875 + CA264_09820 0.44 +0.0 2,281,900 + CA264_09820 0.57 +0.9 2,281,934 + CA264_09820 0.74 -0.4 2,281,935 - CA264_09820 0.75 +0.4 2,282,001 + -1.8 2,282,038 - -0.8 2,282,069 + -0.5 2,282,070 - +0.7 2,282,163 - -0.9 2,282,174 - +0.1 2,282,178 + -1.0 2,282,179 - +0.0 2,282,179 - -0.2 2,282,181 - -0.3 2,282,181 - +0.3 2,282,181 - -1.5 2,282,360 + CA264_09825 0.12 +0.3 2,282,360 + CA264_09825 0.12 +0.0 2,282,362 + CA264_09825 0.12 -0.3 2,282,362 + CA264_09825 0.12 +1.7 2,282,381 + CA264_09825 0.13 -0.7 2,282,415 + CA264_09825 0.14 -0.0 2,282,429 + CA264_09825 0.15 +0.3 2,282,457 + CA264_09825 0.16 -0.4 2,282,457 + CA264_09825 0.16 -0.2 2,282,603 + CA264_09825 0.22 -0.6 2,282,632 - CA264_09825 0.23 +0.8 2,282,632 - CA264_09825 0.23 -0.8 2,282,635 + CA264_09825 0.23 +0.1 2,282,635 + CA264_09825 0.23 +0.1 2,282,635 + CA264_09825 0.23 -0.6 2,282,635 + CA264_09825 0.23 -0.1 2,282,635 + CA264_09825 0.23 +0.7 2,282,636 - CA264_09825 0.23 -0.7 2,282,669 + CA264_09825 0.24 -0.1 2,282,718 + CA264_09825 0.26 +0.5 2,282,718 + CA264_09825 0.26 -0.1 2,282,720 + CA264_09825 0.27 +0.7 2,282,721 - CA264_09825 0.27 -0.3 2,282,721 - CA264_09825 0.27 -0.1 2,282,721 - CA264_09825 0.27 -0.5 2,282,721 - CA264_09825 0.27 -0.4 2,282,730 + CA264_09825 0.27 -1.8 2,282,731 - CA264_09825 0.27 -1.0 2,282,731 - CA264_09825 0.27 +0.7 2,282,731 - CA264_09825 0.27 +0.6 2,282,732 + CA264_09825 0.27 +0.3 2,282,762 + CA264_09825 0.28 -1.0 2,282,762 + CA264_09825 0.28 -0.7 2,282,775 - CA264_09825 0.29 -0.5 2,282,780 + CA264_09825 0.29 +0.1 2,282,780 + CA264_09825 0.29 +1.6 2,282,780 + CA264_09825 0.29 -0.7 2,282,781 - CA264_09825 0.29 +0.6 2,282,781 - CA264_09825 0.29 +0.7 2,282,781 - CA264_09825 0.29 -0.6 2,282,826 + CA264_09825 0.31 +1.3 2,282,828 + CA264_09825 0.31 -0.9 2,282,831 + CA264_09825 0.31 -1.5 2,282,832 - CA264_09825 0.31 +0.4 2,282,871 - CA264_09825 0.33 -1.5 2,282,876 - CA264_09825 0.33 -0.4 2,282,927 + CA264_09825 0.35 +1.1 2,282,928 - CA264_09825 0.35 -0.2 2,282,928 - CA264_09825 0.35 +0.2 2,282,928 - CA264_09825 0.35 -0.3 2,282,932 + CA264_09825 0.35 +0.0 2,282,932 + CA264_09825 0.35 +0.0 2,282,932 + CA264_09825 0.35 -0.4 2,282,932 + CA264_09825 0.35 +1.7 2,282,932 + CA264_09825 0.35 +0.1 2,282,972 - CA264_09825 0.37 -0.4
Or see this region's nucleotide sequence