Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09630 and CA264_09635 are separated by 118 nucleotides CA264_09635 and CA264_09640 are separated by 98 nucleotides CA264_09640 and CA264_09645 are separated by 89 nucleotides CA264_09645 and CA264_09650 are separated by 82 nucleotides
CA264_09630: CA264_09630 - hypothetical protein, at 2,244,247 to 2,244,885
_09630
CA264_09635: CA264_09635 - hypothetical protein, at 2,245,004 to 2,245,669
_09635
CA264_09640: CA264_09640 - hypothetical protein, at 2,245,768 to 2,246,403
_09640
CA264_09645: CA264_09645 - hypothetical protein, at 2,246,493 to 2,246,888
_09645
CA264_09650: CA264_09650 - hypothetical protein, at 2,246,971 to 2,247,432
_09650
Position (kb)
2245
2246
2247 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2244.770 kb on + strand, within CA264_09630 at 2244.783 kb on + strand, within CA264_09630 at 2244.792 kb on - strand, within CA264_09630 at 2244.796 kb on + strand, within CA264_09630 at 2244.835 kb on + strand at 2244.836 kb on - strand at 2244.850 kb on + strand at 2244.856 kb on + strand at 2244.856 kb on + strand at 2244.856 kb on + strand at 2244.863 kb on - strand at 2244.892 kb on + strand at 2244.892 kb on + strand at 2244.892 kb on + strand at 2244.979 kb on + strand at 2244.980 kb on - strand at 2244.980 kb on - strand at 2244.985 kb on + strand at 2245.003 kb on - strand at 2245.005 kb on + strand at 2245.038 kb on - strand at 2245.089 kb on + strand, within CA264_09635 at 2245.149 kb on - strand, within CA264_09635 at 2245.185 kb on - strand, within CA264_09635 at 2245.203 kb on + strand, within CA264_09635 at 2245.284 kb on + strand, within CA264_09635 at 2245.320 kb on - strand, within CA264_09635 at 2245.330 kb on + strand, within CA264_09635 at 2245.342 kb on + strand, within CA264_09635 at 2245.382 kb on + strand, within CA264_09635 at 2245.530 kb on - strand, within CA264_09635 at 2245.530 kb on - strand, within CA264_09635 at 2245.558 kb on + strand, within CA264_09635 at 2245.591 kb on + strand, within CA264_09635 at 2245.596 kb on - strand, within CA264_09635 at 2245.655 kb on - strand at 2245.698 kb on + strand at 2245.699 kb on - strand at 2245.717 kb on + strand at 2245.718 kb on - strand at 2245.745 kb on - strand at 2245.745 kb on - strand at 2245.756 kb on - strand at 2245.756 kb on - strand at 2245.763 kb on + strand at 2245.770 kb on - strand at 2245.770 kb on - strand at 2245.841 kb on + strand, within CA264_09640 at 2245.841 kb on + strand, within CA264_09640 at 2245.841 kb on + strand, within CA264_09640 at 2245.842 kb on - strand, within CA264_09640 at 2245.916 kb on + strand, within CA264_09640 at 2245.936 kb on + strand, within CA264_09640 at 2245.957 kb on - strand, within CA264_09640 at 2245.987 kb on + strand, within CA264_09640 at 2245.987 kb on + strand, within CA264_09640 at 2246.007 kb on + strand, within CA264_09640 at 2246.022 kb on + strand, within CA264_09640 at 2246.024 kb on + strand, within CA264_09640 at 2246.031 kb on + strand, within CA264_09640 at 2246.036 kb on - strand, within CA264_09640 at 2246.047 kb on + strand, within CA264_09640 at 2246.078 kb on - strand, within CA264_09640 at 2246.078 kb on - strand, within CA264_09640 at 2246.078 kb on - strand, within CA264_09640 at 2246.083 kb on - strand, within CA264_09640 at 2246.083 kb on - strand, within CA264_09640 at 2246.102 kb on - strand, within CA264_09640 at 2246.219 kb on - strand, within CA264_09640 at 2246.248 kb on - strand, within CA264_09640 at 2246.255 kb on + strand, within CA264_09640 at 2246.289 kb on + strand, within CA264_09640 at 2246.290 kb on - strand, within CA264_09640 at 2246.365 kb on - strand at 2246.384 kb on - strand at 2246.420 kb on + strand at 2246.495 kb on - strand at 2246.516 kb on + strand at 2246.608 kb on - strand, within CA264_09645 at 2246.719 kb on - strand, within CA264_09645 at 2246.728 kb on - strand, within CA264_09645 at 2246.729 kb on + strand, within CA264_09645 at 2246.741 kb on + strand, within CA264_09645 at 2246.741 kb on + strand, within CA264_09645 at 2246.847 kb on + strand, within CA264_09645 at 2246.875 kb on + strand at 2246.876 kb on - strand at 2246.893 kb on + strand at 2246.901 kb on - strand at 2246.921 kb on + strand at 2246.922 kb on - strand at 2246.937 kb on + strand at 2246.937 kb on + strand at 2247.074 kb on - strand, within CA264_09650 at 2247.079 kb on + strand, within CA264_09650 at 2247.109 kb on - strand, within CA264_09650 at 2247.109 kb on - strand, within CA264_09650 at 2247.174 kb on - strand, within CA264_09650 at 2247.174 kb on - strand, within CA264_09650 at 2247.182 kb on - strand, within CA264_09650 at 2247.282 kb on + strand, within CA264_09650 at 2247.366 kb on - strand, within CA264_09650
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 2,244,770 + CA264_09630 0.82 -0.4 2,244,783 + CA264_09630 0.84 -0.2 2,244,792 - CA264_09630 0.85 -1.2 2,244,796 + CA264_09630 0.86 +1.7 2,244,835 + -0.1 2,244,836 - -0.4 2,244,850 + +0.2 2,244,856 + -0.3 2,244,856 + -0.1 2,244,856 + +1.0 2,244,863 - -0.1 2,244,892 + -0.7 2,244,892 + +0.1 2,244,892 + -0.2 2,244,979 + +0.6 2,244,980 - -0.2 2,244,980 - -0.2 2,244,985 + +0.8 2,245,003 - +0.1 2,245,005 + +0.1 2,245,038 - -0.1 2,245,089 + CA264_09635 0.13 +3.0 2,245,149 - CA264_09635 0.22 +0.6 2,245,185 - CA264_09635 0.27 +0.1 2,245,203 + CA264_09635 0.30 -0.5 2,245,284 + CA264_09635 0.42 +0.6 2,245,320 - CA264_09635 0.47 -0.3 2,245,330 + CA264_09635 0.49 +0.0 2,245,342 + CA264_09635 0.51 +0.1 2,245,382 + CA264_09635 0.57 -0.7 2,245,530 - CA264_09635 0.79 +2.3 2,245,530 - CA264_09635 0.79 -0.7 2,245,558 + CA264_09635 0.83 -0.0 2,245,591 + CA264_09635 0.88 -0.9 2,245,596 - CA264_09635 0.89 -0.8 2,245,655 - -0.3 2,245,698 + +0.6 2,245,699 - +0.9 2,245,717 + +0.5 2,245,718 - -0.6 2,245,745 - -0.5 2,245,745 - +0.2 2,245,756 - +0.3 2,245,756 - -0.6 2,245,763 + -0.7 2,245,770 - -0.3 2,245,770 - -1.2 2,245,841 + CA264_09640 0.11 -0.5 2,245,841 + CA264_09640 0.11 -1.1 2,245,841 + CA264_09640 0.11 +0.2 2,245,842 - CA264_09640 0.12 -0.3 2,245,916 + CA264_09640 0.23 -0.6 2,245,936 + CA264_09640 0.26 +0.0 2,245,957 - CA264_09640 0.30 +0.2 2,245,987 + CA264_09640 0.34 +1.2 2,245,987 + CA264_09640 0.34 -0.2 2,246,007 + CA264_09640 0.38 -2.6 2,246,022 + CA264_09640 0.40 +0.3 2,246,024 + CA264_09640 0.40 -2.1 2,246,031 + CA264_09640 0.41 -0.2 2,246,036 - CA264_09640 0.42 -0.7 2,246,047 + CA264_09640 0.44 +0.5 2,246,078 - CA264_09640 0.49 -0.5 2,246,078 - CA264_09640 0.49 -1.3 2,246,078 - CA264_09640 0.49 +0.8 2,246,083 - CA264_09640 0.50 -0.6 2,246,083 - CA264_09640 0.50 -0.2 2,246,102 - CA264_09640 0.53 -1.2 2,246,219 - CA264_09640 0.71 -0.5 2,246,248 - CA264_09640 0.75 -0.8 2,246,255 + CA264_09640 0.77 -1.7 2,246,289 + CA264_09640 0.82 -1.2 2,246,290 - CA264_09640 0.82 -0.3 2,246,365 - -0.3 2,246,384 - -2.0 2,246,420 + -0.4 2,246,495 - -0.5 2,246,516 + +1.8 2,246,608 - CA264_09645 0.29 -0.3 2,246,719 - CA264_09645 0.57 -1.4 2,246,728 - CA264_09645 0.59 -0.5 2,246,729 + CA264_09645 0.60 +0.1 2,246,741 + CA264_09645 0.63 -0.6 2,246,741 + CA264_09645 0.63 -1.4 2,246,847 + CA264_09645 0.89 -0.0 2,246,875 + +0.0 2,246,876 - +0.3 2,246,893 + +0.4 2,246,901 - +0.0 2,246,921 + -0.4 2,246,922 - -0.4 2,246,937 + -0.1 2,246,937 + -0.3 2,247,074 - CA264_09650 0.22 -1.3 2,247,079 + CA264_09650 0.23 -0.3 2,247,109 - CA264_09650 0.30 +0.3 2,247,109 - CA264_09650 0.30 -1.2 2,247,174 - CA264_09650 0.44 -0.5 2,247,174 - CA264_09650 0.44 -1.1 2,247,182 - CA264_09650 0.46 +1.4 2,247,282 + CA264_09650 0.67 -0.5 2,247,366 - CA264_09650 0.85 +0.7
Or see this region's nucleotide sequence