Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_08810 and CA264_08815 are separated by 214 nucleotides CA264_08815 and CA264_08820 are separated by 209 nucleotides CA264_08820 and CA264_08825 are separated by 59 nucleotides
CA264_08810: CA264_08810 - aminopeptidase, at 2,056,055 to 2,058,658
_08810
CA264_08815: CA264_08815 - pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, at 2,058,873 to 2,060,549
_08815
CA264_08820: CA264_08820 - histidine phosphatase family protein, at 2,060,759 to 2,061,388
_08820
CA264_08825: CA264_08825 - thioesterase, at 2,061,448 to 2,061,867
_08825
Position (kb)
2058
2059
2060
2061 Strain fitness (log2 ratio)
-2
-1
0
1 at 2057.922 kb on + strand, within CA264_08810 at 2057.922 kb on + strand, within CA264_08810 at 2057.923 kb on - strand, within CA264_08810 at 2057.954 kb on + strand, within CA264_08810 at 2058.074 kb on + strand, within CA264_08810 at 2058.075 kb on - strand, within CA264_08810 at 2058.082 kb on + strand, within CA264_08810 at 2058.083 kb on - strand, within CA264_08810 at 2058.173 kb on + strand, within CA264_08810 at 2058.173 kb on + strand, within CA264_08810 at 2058.175 kb on + strand, within CA264_08810 at 2058.175 kb on + strand, within CA264_08810 at 2058.175 kb on + strand, within CA264_08810 at 2058.175 kb on + strand, within CA264_08810 at 2058.175 kb on + strand, within CA264_08810 at 2058.175 kb on + strand, within CA264_08810 at 2058.175 kb on + strand, within CA264_08810 at 2058.175 kb on + strand, within CA264_08810 at 2058.176 kb on - strand, within CA264_08810 at 2058.431 kb on + strand at 2058.454 kb on - strand at 2058.481 kb on + strand at 2058.581 kb on + strand at 2058.656 kb on + strand at 2058.707 kb on - strand at 2058.790 kb on - strand at 2058.790 kb on - strand at 2058.854 kb on - strand at 2060.577 kb on - strand at 2060.586 kb on - strand at 2060.659 kb on + strand at 2060.659 kb on + strand at 2060.682 kb on - strand at 2060.694 kb on + strand at 2060.713 kb on + strand at 2060.728 kb on - strand at 2060.749 kb on + strand at 2060.827 kb on + strand, within CA264_08820 at 2060.827 kb on + strand, within CA264_08820 at 2060.829 kb on + strand, within CA264_08820 at 2060.830 kb on - strand, within CA264_08820 at 2060.830 kb on - strand, within CA264_08820 at 2060.841 kb on + strand, within CA264_08820 at 2060.841 kb on + strand, within CA264_08820 at 2061.084 kb on + strand, within CA264_08820 at 2061.084 kb on + strand, within CA264_08820 at 2061.084 kb on + strand, within CA264_08820 at 2061.085 kb on - strand, within CA264_08820 at 2061.085 kb on - strand, within CA264_08820 at 2061.181 kb on + strand, within CA264_08820 at 2061.181 kb on + strand, within CA264_08820 at 2061.182 kb on - strand, within CA264_08820 at 2061.200 kb on + strand, within CA264_08820 at 2061.201 kb on - strand, within CA264_08820 at 2061.226 kb on - strand, within CA264_08820 at 2061.226 kb on - strand, within CA264_08820 at 2061.233 kb on - strand, within CA264_08820 at 2061.233 kb on - strand, within CA264_08820 at 2061.251 kb on - strand, within CA264_08820 at 2061.251 kb on - strand, within CA264_08820 at 2061.251 kb on - strand, within CA264_08820 at 2061.251 kb on - strand, within CA264_08820 at 2061.252 kb on + strand, within CA264_08820 at 2061.328 kb on + strand at 2061.329 kb on - strand at 2061.341 kb on - strand at 2061.342 kb on + strand at 2061.343 kb on - strand at 2061.369 kb on + strand at 2061.369 kb on + strand at 2061.371 kb on + strand at 2061.372 kb on - strand at 2061.380 kb on - strand at 2061.411 kb on + strand at 2061.411 kb on + strand at 2061.411 kb on + strand at 2061.416 kb on - strand at 2061.421 kb on + strand at 2061.448 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 2,057,922 + CA264_08810 0.72 -0.4 2,057,922 + CA264_08810 0.72 -0.2 2,057,923 - CA264_08810 0.72 -1.1 2,057,954 + CA264_08810 0.73 -0.3 2,058,074 + CA264_08810 0.78 -0.3 2,058,075 - CA264_08810 0.78 +0.3 2,058,082 + CA264_08810 0.78 +0.1 2,058,083 - CA264_08810 0.78 -0.3 2,058,173 + CA264_08810 0.81 +0.6 2,058,173 + CA264_08810 0.81 -0.6 2,058,175 + CA264_08810 0.81 -0.2 2,058,175 + CA264_08810 0.81 +0.2 2,058,175 + CA264_08810 0.81 -0.2 2,058,175 + CA264_08810 0.81 -0.0 2,058,175 + CA264_08810 0.81 -0.1 2,058,175 + CA264_08810 0.81 -1.7 2,058,175 + CA264_08810 0.81 -0.5 2,058,175 + CA264_08810 0.81 -1.8 2,058,176 - CA264_08810 0.81 +0.9 2,058,431 + -0.1 2,058,454 - +0.3 2,058,481 + -1.0 2,058,581 + -0.2 2,058,656 + -1.1 2,058,707 - +0.4 2,058,790 - -0.2 2,058,790 - +1.5 2,058,854 - -1.3 2,060,577 - +0.2 2,060,586 - +0.2 2,060,659 + -0.3 2,060,659 + -0.1 2,060,682 - +1.7 2,060,694 + +0.7 2,060,713 + -0.2 2,060,728 - -0.6 2,060,749 + -1.0 2,060,827 + CA264_08820 0.11 +0.2 2,060,827 + CA264_08820 0.11 -1.6 2,060,829 + CA264_08820 0.11 +0.1 2,060,830 - CA264_08820 0.11 +0.6 2,060,830 - CA264_08820 0.11 +0.1 2,060,841 + CA264_08820 0.13 -0.2 2,060,841 + CA264_08820 0.13 +1.1 2,061,084 + CA264_08820 0.52 -1.3 2,061,084 + CA264_08820 0.52 -0.3 2,061,084 + CA264_08820 0.52 -0.6 2,061,085 - CA264_08820 0.52 +0.0 2,061,085 - CA264_08820 0.52 -0.1 2,061,181 + CA264_08820 0.67 -0.0 2,061,181 + CA264_08820 0.67 -2.1 2,061,182 - CA264_08820 0.67 +0.5 2,061,200 + CA264_08820 0.70 +0.0 2,061,201 - CA264_08820 0.70 -0.4 2,061,226 - CA264_08820 0.74 +0.1 2,061,226 - CA264_08820 0.74 -0.0 2,061,233 - CA264_08820 0.75 -1.5 2,061,233 - CA264_08820 0.75 +0.7 2,061,251 - CA264_08820 0.78 -0.7 2,061,251 - CA264_08820 0.78 -0.1 2,061,251 - CA264_08820 0.78 +0.3 2,061,251 - CA264_08820 0.78 -0.3 2,061,252 + CA264_08820 0.78 +0.5 2,061,328 + +0.6 2,061,329 - +0.0 2,061,341 - -1.9 2,061,342 + +0.1 2,061,343 - +0.2 2,061,369 + +0.3 2,061,369 + -0.6 2,061,371 + +0.3 2,061,372 - -0.1 2,061,380 - -0.0 2,061,411 + -0.6 2,061,411 + -0.2 2,061,411 + -0.9 2,061,416 - -0.3 2,061,421 + -0.6 2,061,448 - +0.1
Or see this region's nucleotide sequence