Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_08080 and CA264_08085 are separated by 98 nucleotides CA264_08085 and CA264_08090 are separated by 189 nucleotides
CA264_08080: CA264_08080 - gliding motility-associated ABC transporter ATP-binding subunit GldA, at 1,866,176 to 1,867,090
_08080
CA264_08085: CA264_08085 - short-chain dehydrogenase, at 1,867,189 to 1,867,893
_08085
CA264_08090: CA264_08090 - short-chain dehydrogenase, at 1,868,083 to 1,868,790
_08090
Position (kb)
1867
1868 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1866.808 kb on - strand, within CA264_08080 at 1866.819 kb on + strand, within CA264_08080 at 1866.819 kb on + strand, within CA264_08080 at 1866.819 kb on + strand, within CA264_08080 at 1866.820 kb on - strand, within CA264_08080 at 1866.820 kb on - strand, within CA264_08080 at 1866.820 kb on - strand, within CA264_08080 at 1866.820 kb on - strand, within CA264_08080 at 1866.820 kb on - strand, within CA264_08080 at 1866.820 kb on - strand, within CA264_08080 at 1866.820 kb on - strand, within CA264_08080 at 1866.820 kb on - strand, within CA264_08080 at 1866.823 kb on + strand, within CA264_08080 at 1867.077 kb on - strand at 1867.093 kb on - strand at 1867.093 kb on - strand at 1867.093 kb on - strand at 1867.093 kb on - strand at 1867.094 kb on + strand at 1867.095 kb on - strand at 1867.097 kb on + strand at 1867.098 kb on - strand at 1867.106 kb on + strand at 1867.107 kb on - strand at 1867.120 kb on + strand at 1867.121 kb on - strand at 1867.187 kb on - strand at 1867.190 kb on + strand at 1867.191 kb on - strand at 1867.233 kb on + strand at 1867.333 kb on + strand, within CA264_08085 at 1867.334 kb on - strand, within CA264_08085 at 1867.381 kb on + strand, within CA264_08085 at 1867.495 kb on - strand, within CA264_08085 at 1867.512 kb on + strand, within CA264_08085 at 1867.658 kb on - strand, within CA264_08085 at 1867.851 kb on + strand at 1867.854 kb on + strand at 1867.952 kb on + strand at 1867.986 kb on + strand at 1867.987 kb on - strand at 1867.987 kb on - strand at 1867.995 kb on + strand at 1868.046 kb on - strand at 1868.071 kb on + strand at 1868.078 kb on - strand at 1868.078 kb on - strand at 1868.085 kb on - strand at 1868.085 kb on - strand at 1868.249 kb on - strand, within CA264_08090 at 1868.249 kb on - strand, within CA264_08090 at 1868.333 kb on + strand, within CA264_08090 at 1868.347 kb on - strand, within CA264_08090 at 1868.349 kb on + strand, within CA264_08090 at 1868.349 kb on + strand, within CA264_08090 at 1868.351 kb on + strand, within CA264_08090 at 1868.351 kb on + strand, within CA264_08090 at 1868.352 kb on - strand, within CA264_08090 at 1868.352 kb on - strand, within CA264_08090 at 1868.362 kb on - strand, within CA264_08090 at 1868.362 kb on - strand, within CA264_08090 at 1868.383 kb on - strand, within CA264_08090 at 1868.388 kb on + strand, within CA264_08090 at 1868.437 kb on - strand, within CA264_08090 at 1868.438 kb on + strand, within CA264_08090 at 1868.438 kb on + strand, within CA264_08090 at 1868.438 kb on + strand, within CA264_08090 at 1868.439 kb on - strand, within CA264_08090 at 1868.439 kb on - strand, within CA264_08090 at 1868.442 kb on - strand, within CA264_08090 at 1868.546 kb on - strand, within CA264_08090 at 1868.570 kb on + strand, within CA264_08090 at 1868.570 kb on + strand, within CA264_08090 at 1868.570 kb on + strand, within CA264_08090 at 1868.570 kb on + strand, within CA264_08090 at 1868.570 kb on + strand, within CA264_08090 at 1868.571 kb on - strand, within CA264_08090 at 1868.643 kb on - strand, within CA264_08090 at 1868.643 kb on - strand, within CA264_08090 at 1868.643 kb on - strand, within CA264_08090 at 1868.703 kb on + strand, within CA264_08090 at 1868.706 kb on + strand, within CA264_08090 at 1868.706 kb on + strand, within CA264_08090 at 1868.706 kb on + strand, within CA264_08090 at 1868.707 kb on - strand, within CA264_08090 at 1868.735 kb on - strand at 1868.781 kb on - strand at 1868.781 kb on - strand at 1868.791 kb on - strand at 1868.791 kb on - strand at 1868.791 kb on - strand at 1868.806 kb on - strand at 1868.829 kb on - strand at 1868.829 kb on - strand at 1868.829 kb on - strand at 1868.832 kb on - strand at 1868.832 kb on - strand at 1868.837 kb on + strand at 1868.837 kb on + strand at 1868.841 kb on + strand at 1868.870 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 1,866,808 - CA264_08080 0.69 -1.1 1,866,819 + CA264_08080 0.70 -0.8 1,866,819 + CA264_08080 0.70 -0.6 1,866,819 + CA264_08080 0.70 -0.3 1,866,820 - CA264_08080 0.70 +0.8 1,866,820 - CA264_08080 0.70 -0.6 1,866,820 - CA264_08080 0.70 -1.4 1,866,820 - CA264_08080 0.70 -0.6 1,866,820 - CA264_08080 0.70 -0.9 1,866,820 - CA264_08080 0.70 -1.0 1,866,820 - CA264_08080 0.70 -1.8 1,866,820 - CA264_08080 0.70 -0.8 1,866,823 + CA264_08080 0.71 +1.5 1,867,077 - -0.1 1,867,093 - +0.6 1,867,093 - +0.1 1,867,093 - -0.1 1,867,093 - +2.2 1,867,094 + -1.3 1,867,095 - -1.8 1,867,097 + -0.2 1,867,098 - -0.1 1,867,106 + -1.1 1,867,107 - +0.8 1,867,120 + -0.4 1,867,121 - +0.6 1,867,187 - +0.1 1,867,190 + +0.4 1,867,191 - -0.4 1,867,233 + -1.0 1,867,333 + CA264_08085 0.20 +0.8 1,867,334 - CA264_08085 0.21 +0.3 1,867,381 + CA264_08085 0.27 +2.2 1,867,495 - CA264_08085 0.43 -0.1 1,867,512 + CA264_08085 0.46 -0.2 1,867,658 - CA264_08085 0.67 +0.7 1,867,851 + -0.8 1,867,854 + -0.7 1,867,952 + -0.4 1,867,986 + -2.2 1,867,987 - +0.6 1,867,987 - +0.6 1,867,995 + +0.6 1,868,046 - +0.9 1,868,071 + -0.8 1,868,078 - -0.6 1,868,078 - -0.5 1,868,085 - -0.2 1,868,085 - +0.1 1,868,249 - CA264_08090 0.23 -2.4 1,868,249 - CA264_08090 0.23 -3.5 1,868,333 + CA264_08090 0.35 -2.8 1,868,347 - CA264_08090 0.37 -0.5 1,868,349 + CA264_08090 0.38 -1.0 1,868,349 + CA264_08090 0.38 -0.8 1,868,351 + CA264_08090 0.38 -3.4 1,868,351 + CA264_08090 0.38 -1.5 1,868,352 - CA264_08090 0.38 -1.3 1,868,352 - CA264_08090 0.38 -2.2 1,868,362 - CA264_08090 0.39 -1.7 1,868,362 - CA264_08090 0.39 -3.8 1,868,383 - CA264_08090 0.42 -2.7 1,868,388 + CA264_08090 0.43 -4.0 1,868,437 - CA264_08090 0.50 -1.4 1,868,438 + CA264_08090 0.50 -2.2 1,868,438 + CA264_08090 0.50 -1.6 1,868,438 + CA264_08090 0.50 -2.0 1,868,439 - CA264_08090 0.50 -2.0 1,868,439 - CA264_08090 0.50 -0.9 1,868,442 - CA264_08090 0.51 -1.2 1,868,546 - CA264_08090 0.65 -2.1 1,868,570 + CA264_08090 0.69 -2.0 1,868,570 + CA264_08090 0.69 -0.3 1,868,570 + CA264_08090 0.69 -1.3 1,868,570 + CA264_08090 0.69 -1.1 1,868,570 + CA264_08090 0.69 -2.6 1,868,571 - CA264_08090 0.69 -1.8 1,868,643 - CA264_08090 0.79 -3.6 1,868,643 - CA264_08090 0.79 -0.6 1,868,643 - CA264_08090 0.79 -3.1 1,868,703 + CA264_08090 0.88 -1.1 1,868,706 + CA264_08090 0.88 -0.6 1,868,706 + CA264_08090 0.88 -0.9 1,868,706 + CA264_08090 0.88 -4.0 1,868,707 - CA264_08090 0.88 -3.8 1,868,735 - -1.5 1,868,781 - -1.5 1,868,781 - -3.7 1,868,791 - +0.2 1,868,791 - -0.2 1,868,791 - -1.0 1,868,806 - +0.6 1,868,829 - +0.8 1,868,829 - +0.6 1,868,829 - +0.6 1,868,832 - +0.6 1,868,832 - +0.1 1,868,837 + +2.4 1,868,837 + +1.4 1,868,841 + +1.5 1,868,870 - +0.8
Or see this region's nucleotide sequence