Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_08070 and CA264_08075 overlap by 7 nucleotides CA264_08075 and CA264_08080 are separated by 99 nucleotides CA264_08080 and CA264_08085 are separated by 98 nucleotides CA264_08085 and CA264_08090 are separated by 189 nucleotides
CA264_08070: CA264_08070 - gliding motility-associated ABC transporter substrate-binding protein GldG, at 1,863,663 to 1,865,354
_08070
CA264_08075: CA264_08075 - gliding motility-associated ABC transporter permease subunit GldF, at 1,865,348 to 1,866,076
_08075
CA264_08080: CA264_08080 - gliding motility-associated ABC transporter ATP-binding subunit GldA, at 1,866,176 to 1,867,090
_08080
CA264_08085: CA264_08085 - short-chain dehydrogenase, at 1,867,189 to 1,867,893
_08085
CA264_08090: CA264_08090 - short-chain dehydrogenase, at 1,868,083 to 1,868,790
_08090
Position (kb)
1866
1867
1868 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1865.286 kb on - strand at 1865.316 kb on - strand at 1865.316 kb on - strand at 1865.511 kb on - strand, within CA264_08075 at 1865.544 kb on + strand, within CA264_08075 at 1865.544 kb on + strand, within CA264_08075 at 1865.545 kb on - strand, within CA264_08075 at 1865.730 kb on + strand, within CA264_08075 at 1865.795 kb on - strand, within CA264_08075 at 1865.835 kb on - strand, within CA264_08075 at 1865.917 kb on + strand, within CA264_08075 at 1865.922 kb on - strand, within CA264_08075 at 1866.019 kb on + strand at 1866.079 kb on - strand at 1866.085 kb on - strand at 1866.808 kb on - strand, within CA264_08080 at 1866.819 kb on + strand, within CA264_08080 at 1866.819 kb on + strand, within CA264_08080 at 1866.819 kb on + strand, within CA264_08080 at 1866.820 kb on - strand, within CA264_08080 at 1866.820 kb on - strand, within CA264_08080 at 1866.820 kb on - strand, within CA264_08080 at 1866.820 kb on - strand, within CA264_08080 at 1866.820 kb on - strand, within CA264_08080 at 1866.820 kb on - strand, within CA264_08080 at 1866.820 kb on - strand, within CA264_08080 at 1866.820 kb on - strand, within CA264_08080 at 1866.823 kb on + strand, within CA264_08080 at 1867.077 kb on - strand at 1867.093 kb on - strand at 1867.093 kb on - strand at 1867.093 kb on - strand at 1867.093 kb on - strand at 1867.094 kb on + strand at 1867.095 kb on - strand at 1867.097 kb on + strand at 1867.098 kb on - strand at 1867.106 kb on + strand at 1867.107 kb on - strand at 1867.120 kb on + strand at 1867.121 kb on - strand at 1867.187 kb on - strand at 1867.190 kb on + strand at 1867.191 kb on - strand at 1867.233 kb on + strand at 1867.333 kb on + strand, within CA264_08085 at 1867.334 kb on - strand, within CA264_08085 at 1867.381 kb on + strand, within CA264_08085 at 1867.495 kb on - strand, within CA264_08085 at 1867.512 kb on + strand, within CA264_08085 at 1867.658 kb on - strand, within CA264_08085 at 1867.851 kb on + strand at 1867.854 kb on + strand at 1867.952 kb on + strand at 1867.986 kb on + strand at 1867.987 kb on - strand at 1867.987 kb on - strand at 1867.995 kb on + strand at 1868.046 kb on - strand at 1868.071 kb on + strand at 1868.078 kb on - strand at 1868.078 kb on - strand at 1868.085 kb on - strand at 1868.085 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 1,865,286 - -0.8 1,865,316 - -1.5 1,865,316 - -0.8 1,865,511 - CA264_08075 0.22 +0.4 1,865,544 + CA264_08075 0.27 -2.6 1,865,544 + CA264_08075 0.27 -1.0 1,865,545 - CA264_08075 0.27 -0.6 1,865,730 + CA264_08075 0.52 -0.6 1,865,795 - CA264_08075 0.61 -1.9 1,865,835 - CA264_08075 0.67 -1.6 1,865,917 + CA264_08075 0.78 -1.1 1,865,922 - CA264_08075 0.79 -1.3 1,866,019 + -1.8 1,866,079 - +0.2 1,866,085 - +0.4 1,866,808 - CA264_08080 0.69 -1.1 1,866,819 + CA264_08080 0.70 -0.8 1,866,819 + CA264_08080 0.70 -0.6 1,866,819 + CA264_08080 0.70 -0.3 1,866,820 - CA264_08080 0.70 +0.8 1,866,820 - CA264_08080 0.70 -0.6 1,866,820 - CA264_08080 0.70 -1.4 1,866,820 - CA264_08080 0.70 -0.6 1,866,820 - CA264_08080 0.70 -0.9 1,866,820 - CA264_08080 0.70 -1.0 1,866,820 - CA264_08080 0.70 -1.8 1,866,820 - CA264_08080 0.70 -0.8 1,866,823 + CA264_08080 0.71 +1.5 1,867,077 - -0.1 1,867,093 - +0.6 1,867,093 - +0.1 1,867,093 - -0.1 1,867,093 - +2.2 1,867,094 + -1.3 1,867,095 - -1.8 1,867,097 + -0.2 1,867,098 - -0.1 1,867,106 + -1.1 1,867,107 - +0.8 1,867,120 + -0.4 1,867,121 - +0.6 1,867,187 - +0.1 1,867,190 + +0.4 1,867,191 - -0.4 1,867,233 + -1.0 1,867,333 + CA264_08085 0.20 +0.8 1,867,334 - CA264_08085 0.21 +0.3 1,867,381 + CA264_08085 0.27 +2.2 1,867,495 - CA264_08085 0.43 -0.1 1,867,512 + CA264_08085 0.46 -0.2 1,867,658 - CA264_08085 0.67 +0.7 1,867,851 + -0.8 1,867,854 + -0.7 1,867,952 + -0.4 1,867,986 + -2.2 1,867,987 - +0.6 1,867,987 - +0.6 1,867,995 + +0.6 1,868,046 - +0.9 1,868,071 + -0.8 1,868,078 - -0.6 1,868,078 - -0.5 1,868,085 - -0.2 1,868,085 - +0.1
Or see this region's nucleotide sequence