Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07935 and CA264_07940 are separated by 1 nucleotides CA264_07940 and CA264_07945 are separated by 39 nucleotides CA264_07945 and CA264_07950 are separated by 178 nucleotides
CA264_07935: CA264_07935 - hypothetical protein, at 1,835,528 to 1,836,850
_07935
CA264_07940: CA264_07940 - hypothetical protein, at 1,836,852 to 1,837,106
_07940
CA264_07945: CA264_07945 - AMP-binding protein, at 1,837,146 to 1,838,759
_07945
CA264_07950: CA264_07950 - UDP-N-acetylglucosamine 4,6-dehydratase (inverting), at 1,838,938 to 1,839,957
_07950
Position (kb)
1837
1838
1839 Strain fitness (log2 ratio)
-2
-1
0
1 at 1836.831 kb on + strand at 1836.848 kb on + strand at 1836.865 kb on + strand at 1836.872 kb on + strand at 1836.873 kb on - strand at 1836.873 kb on - strand at 1836.891 kb on + strand, within CA264_07940 at 1836.891 kb on + strand, within CA264_07940 at 1836.892 kb on - strand, within CA264_07940 at 1836.892 kb on - strand, within CA264_07940 at 1836.905 kb on + strand, within CA264_07940 at 1836.927 kb on + strand, within CA264_07940 at 1837.072 kb on + strand, within CA264_07940 at 1837.121 kb on + strand at 1837.122 kb on - strand at 1837.139 kb on + strand at 1837.140 kb on - strand at 1837.143 kb on + strand at 1837.143 kb on + strand at 1837.144 kb on - strand at 1837.154 kb on + strand at 1837.154 kb on + strand at 1837.164 kb on + strand at 1837.164 kb on + strand at 1837.165 kb on - strand at 1837.390 kb on - strand, within CA264_07945 at 1837.480 kb on - strand, within CA264_07945 at 1837.480 kb on - strand, within CA264_07945 at 1837.480 kb on - strand, within CA264_07945 at 1837.543 kb on - strand, within CA264_07945 at 1837.543 kb on - strand, within CA264_07945 at 1837.646 kb on + strand, within CA264_07945 at 1837.646 kb on + strand, within CA264_07945 at 1837.647 kb on - strand, within CA264_07945 at 1837.710 kb on + strand, within CA264_07945 at 1837.822 kb on + strand, within CA264_07945 at 1837.822 kb on + strand, within CA264_07945 at 1837.822 kb on + strand, within CA264_07945 at 1837.823 kb on - strand, within CA264_07945 at 1837.975 kb on - strand, within CA264_07945 at 1838.029 kb on - strand, within CA264_07945 at 1838.029 kb on - strand, within CA264_07945 at 1838.080 kb on + strand, within CA264_07945 at 1838.084 kb on + strand, within CA264_07945 at 1838.085 kb on - strand, within CA264_07945 at 1838.162 kb on - strand, within CA264_07945 at 1838.270 kb on - strand, within CA264_07945 at 1838.415 kb on + strand, within CA264_07945 at 1838.415 kb on + strand, within CA264_07945 at 1838.416 kb on - strand, within CA264_07945 at 1838.471 kb on - strand, within CA264_07945 at 1838.519 kb on - strand, within CA264_07945 at 1838.519 kb on - strand, within CA264_07945 at 1838.519 kb on - strand, within CA264_07945 at 1838.524 kb on + strand, within CA264_07945 at 1838.530 kb on + strand, within CA264_07945 at 1838.530 kb on + strand, within CA264_07945 at 1838.690 kb on + strand at 1838.719 kb on + strand at 1838.719 kb on + strand at 1838.774 kb on + strand at 1838.775 kb on - strand at 1838.776 kb on + strand at 1838.776 kb on + strand at 1838.777 kb on - strand at 1838.777 kb on - strand at 1838.777 kb on - strand at 1838.788 kb on + strand at 1838.788 kb on + strand at 1838.789 kb on - strand at 1838.789 kb on - strand at 1838.801 kb on + strand at 1838.802 kb on - strand at 1838.802 kb on - strand at 1838.802 kb on - strand at 1838.806 kb on - strand at 1838.864 kb on - strand at 1838.864 kb on - strand at 1838.864 kb on - strand at 1838.873 kb on + strand at 1838.873 kb on + strand at 1838.873 kb on + strand at 1838.902 kb on - strand at 1838.902 kb on - strand at 1838.919 kb on + strand at 1838.945 kb on + strand at 1838.946 kb on - strand at 1838.953 kb on - strand at 1839.018 kb on - strand at 1839.056 kb on - strand, within CA264_07950 at 1839.112 kb on + strand, within CA264_07950 at 1839.143 kb on + strand, within CA264_07950 at 1839.143 kb on + strand, within CA264_07950 at 1839.144 kb on - strand, within CA264_07950 at 1839.144 kb on - strand, within CA264_07950 at 1839.186 kb on + strand, within CA264_07950 at 1839.187 kb on - strand, within CA264_07950 at 1839.192 kb on - strand, within CA264_07950 at 1839.192 kb on - strand, within CA264_07950 at 1839.233 kb on - strand, within CA264_07950 at 1839.249 kb on + strand, within CA264_07950 at 1839.264 kb on - strand, within CA264_07950 at 1839.286 kb on - strand, within CA264_07950 at 1839.361 kb on + strand, within CA264_07950 at 1839.361 kb on + strand, within CA264_07950 at 1839.361 kb on + strand, within CA264_07950 at 1839.372 kb on + strand, within CA264_07950 at 1839.377 kb on + strand, within CA264_07950 at 1839.377 kb on + strand, within CA264_07950 at 1839.378 kb on - strand, within CA264_07950 at 1839.451 kb on + strand, within CA264_07950 at 1839.495 kb on + strand, within CA264_07950 at 1839.553 kb on - strand, within CA264_07950 at 1839.575 kb on + strand, within CA264_07950 at 1839.575 kb on + strand, within CA264_07950 at 1839.698 kb on + strand, within CA264_07950 at 1839.699 kb on - strand, within CA264_07950 at 1839.699 kb on - strand, within CA264_07950 at 1839.756 kb on - strand, within CA264_07950
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 1,836,831 + -0.7 1,836,848 + -0.5 1,836,865 + -0.2 1,836,872 + -1.8 1,836,873 - +0.4 1,836,873 - -2.7 1,836,891 + CA264_07940 0.15 -1.0 1,836,891 + CA264_07940 0.15 -0.2 1,836,892 - CA264_07940 0.16 +1.2 1,836,892 - CA264_07940 0.16 -1.0 1,836,905 + CA264_07940 0.21 -0.5 1,836,927 + CA264_07940 0.29 -0.0 1,837,072 + CA264_07940 0.86 +1.6 1,837,121 + -1.0 1,837,122 - -1.8 1,837,139 + -0.2 1,837,140 - +0.2 1,837,143 + +0.4 1,837,143 + -1.3 1,837,144 - +0.1 1,837,154 + -0.7 1,837,154 + +0.2 1,837,164 + +0.2 1,837,164 + -1.4 1,837,165 - -0.4 1,837,390 - CA264_07945 0.15 -2.2 1,837,480 - CA264_07945 0.21 -0.1 1,837,480 - CA264_07945 0.21 +0.9 1,837,480 - CA264_07945 0.21 -1.0 1,837,543 - CA264_07945 0.25 -1.0 1,837,543 - CA264_07945 0.25 -0.7 1,837,646 + CA264_07945 0.31 -0.5 1,837,646 + CA264_07945 0.31 -0.2 1,837,647 - CA264_07945 0.31 -0.5 1,837,710 + CA264_07945 0.35 -0.1 1,837,822 + CA264_07945 0.42 -0.5 1,837,822 + CA264_07945 0.42 +0.7 1,837,822 + CA264_07945 0.42 +0.3 1,837,823 - CA264_07945 0.42 -1.1 1,837,975 - CA264_07945 0.51 -0.3 1,838,029 - CA264_07945 0.55 +1.5 1,838,029 - CA264_07945 0.55 -0.6 1,838,080 + CA264_07945 0.58 +0.1 1,838,084 + CA264_07945 0.58 -0.1 1,838,085 - CA264_07945 0.58 -0.5 1,838,162 - CA264_07945 0.63 -1.4 1,838,270 - CA264_07945 0.70 -0.7 1,838,415 + CA264_07945 0.79 -0.8 1,838,415 + CA264_07945 0.79 -0.8 1,838,416 - CA264_07945 0.79 -0.2 1,838,471 - CA264_07945 0.82 +0.8 1,838,519 - CA264_07945 0.85 -0.7 1,838,519 - CA264_07945 0.85 -0.3 1,838,519 - CA264_07945 0.85 -0.3 1,838,524 + CA264_07945 0.85 -0.9 1,838,530 + CA264_07945 0.86 +0.2 1,838,530 + CA264_07945 0.86 +0.1 1,838,690 + +0.0 1,838,719 + -0.1 1,838,719 + +0.2 1,838,774 + +1.0 1,838,775 - +0.7 1,838,776 + -0.7 1,838,776 + +1.2 1,838,777 - -0.3 1,838,777 - -0.8 1,838,777 - -0.2 1,838,788 + +0.0 1,838,788 + -0.4 1,838,789 - -0.5 1,838,789 - -0.7 1,838,801 + -0.1 1,838,802 - -0.4 1,838,802 - -1.0 1,838,802 - -0.1 1,838,806 - -0.2 1,838,864 - -1.6 1,838,864 - -2.3 1,838,864 - +0.5 1,838,873 + -1.0 1,838,873 + -0.6 1,838,873 + -0.5 1,838,902 - -0.6 1,838,902 - -2.2 1,838,919 + -0.3 1,838,945 + +0.2 1,838,946 - -0.6 1,838,953 - +0.4 1,839,018 - -0.3 1,839,056 - CA264_07950 0.12 -0.1 1,839,112 + CA264_07950 0.17 -0.1 1,839,143 + CA264_07950 0.20 +1.2 1,839,143 + CA264_07950 0.20 -1.6 1,839,144 - CA264_07950 0.20 +0.7 1,839,144 - CA264_07950 0.20 +1.0 1,839,186 + CA264_07950 0.24 -0.0 1,839,187 - CA264_07950 0.24 +0.8 1,839,192 - CA264_07950 0.25 +0.4 1,839,192 - CA264_07950 0.25 +1.2 1,839,233 - CA264_07950 0.29 -0.1 1,839,249 + CA264_07950 0.30 -0.9 1,839,264 - CA264_07950 0.32 -0.4 1,839,286 - CA264_07950 0.34 +1.0 1,839,361 + CA264_07950 0.41 -1.1 1,839,361 + CA264_07950 0.41 -0.0 1,839,361 + CA264_07950 0.41 +0.2 1,839,372 + CA264_07950 0.43 +1.1 1,839,377 + CA264_07950 0.43 +0.0 1,839,377 + CA264_07950 0.43 +0.3 1,839,378 - CA264_07950 0.43 -1.3 1,839,451 + CA264_07950 0.50 -0.4 1,839,495 + CA264_07950 0.55 -0.0 1,839,553 - CA264_07950 0.60 +0.7 1,839,575 + CA264_07950 0.62 +0.2 1,839,575 + CA264_07950 0.62 +0.3 1,839,698 + CA264_07950 0.75 -0.1 1,839,699 - CA264_07950 0.75 -0.1 1,839,699 - CA264_07950 0.75 +0.4 1,839,756 - CA264_07950 0.80 -0.0
Or see this region's nucleotide sequence