Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07730 and CA264_07735 are separated by 261 nucleotides CA264_07735 and CA264_07740 are separated by 217 nucleotides
CA264_07730: CA264_07730 - pyrroline-5-carboxylate reductase, at 1,792,750 to 1,793,574
_07730
CA264_07735: CA264_07735 - hypothetical protein, at 1,793,836 to 1,794,042
_07735
CA264_07740: CA264_07740 - TIGR02757 family protein, at 1,794,260 to 1,795,036
_07740
Position (kb)
1793
1794
1795 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1792.866 kb on + strand, within CA264_07730 at 1792.941 kb on + strand, within CA264_07730 at 1792.942 kb on - strand, within CA264_07730 at 1792.942 kb on - strand, within CA264_07730 at 1793.031 kb on + strand, within CA264_07730 at 1793.043 kb on + strand, within CA264_07730 at 1793.044 kb on - strand, within CA264_07730 at 1793.231 kb on - strand, within CA264_07730 at 1793.231 kb on - strand, within CA264_07730 at 1793.246 kb on - strand, within CA264_07730 at 1793.259 kb on + strand, within CA264_07730 at 1793.261 kb on + strand, within CA264_07730 at 1793.261 kb on + strand, within CA264_07730 at 1793.272 kb on - strand, within CA264_07730 at 1793.336 kb on - strand, within CA264_07730 at 1793.474 kb on + strand, within CA264_07730 at 1793.475 kb on - strand, within CA264_07730 at 1793.475 kb on - strand, within CA264_07730 at 1793.492 kb on + strand at 1793.506 kb on - strand at 1793.557 kb on + strand at 1793.557 kb on + strand at 1793.557 kb on + strand at 1793.557 kb on + strand at 1793.558 kb on - strand at 1793.563 kb on - strand at 1793.593 kb on + strand at 1793.593 kb on + strand at 1793.594 kb on - strand at 1793.594 kb on - strand at 1793.596 kb on - strand at 1793.684 kb on + strand at 1793.684 kb on + strand at 1793.685 kb on - strand at 1793.685 kb on - strand at 1793.685 kb on - strand at 1793.694 kb on - strand at 1793.779 kb on + strand at 1793.785 kb on - strand at 1793.952 kb on + strand, within CA264_07735 at 1793.953 kb on - strand, within CA264_07735 at 1793.997 kb on + strand, within CA264_07735 at 1793.997 kb on + strand, within CA264_07735 at 1794.034 kb on - strand at 1794.066 kb on - strand at 1794.088 kb on + strand at 1794.304 kb on - strand at 1794.304 kb on - strand at 1794.516 kb on + strand, within CA264_07740 at 1794.696 kb on + strand, within CA264_07740 at 1794.696 kb on + strand, within CA264_07740 at 1794.699 kb on + strand, within CA264_07740 at 1794.723 kb on + strand, within CA264_07740 at 1794.800 kb on + strand, within CA264_07740 at 1794.801 kb on - strand, within CA264_07740 at 1794.801 kb on - strand, within CA264_07740 at 1794.884 kb on + strand, within CA264_07740 at 1794.885 kb on - strand, within CA264_07740 at 1794.885 kb on - strand, within CA264_07740 at 1794.964 kb on + strand at 1794.965 kb on - strand at 1795.034 kb on + strand at 1795.034 kb on + strand at 1795.034 kb on + strand at 1795.034 kb on + strand at 1795.035 kb on - strand at 1795.035 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 1,792,866 + CA264_07730 0.14 -0.8 1,792,941 + CA264_07730 0.23 -2.4 1,792,942 - CA264_07730 0.23 -2.7 1,792,942 - CA264_07730 0.23 -2.0 1,793,031 + CA264_07730 0.34 -2.3 1,793,043 + CA264_07730 0.36 -1.6 1,793,044 - CA264_07730 0.36 -2.8 1,793,231 - CA264_07730 0.58 -3.7 1,793,231 - CA264_07730 0.58 -3.0 1,793,246 - CA264_07730 0.60 +0.9 1,793,259 + CA264_07730 0.62 -0.8 1,793,261 + CA264_07730 0.62 -3.1 1,793,261 + CA264_07730 0.62 -0.8 1,793,272 - CA264_07730 0.63 -1.9 1,793,336 - CA264_07730 0.71 -1.5 1,793,474 + CA264_07730 0.88 -1.8 1,793,475 - CA264_07730 0.88 -4.1 1,793,475 - CA264_07730 0.88 -1.3 1,793,492 + -0.8 1,793,506 - -2.0 1,793,557 + -1.6 1,793,557 + -1.1 1,793,557 + -1.5 1,793,557 + -1.8 1,793,558 - -2.2 1,793,563 - -2.4 1,793,593 + -0.5 1,793,593 + +0.2 1,793,594 - -0.5 1,793,594 - -0.8 1,793,596 - -0.7 1,793,684 + +1.2 1,793,684 + -0.1 1,793,685 - -0.3 1,793,685 - +0.9 1,793,685 - -2.1 1,793,694 - +0.4 1,793,779 + -1.3 1,793,785 - -1.4 1,793,952 + CA264_07735 0.56 -0.1 1,793,953 - CA264_07735 0.57 -0.7 1,793,997 + CA264_07735 0.78 +1.2 1,793,997 + CA264_07735 0.78 -0.9 1,794,034 - -1.0 1,794,066 - -0.3 1,794,088 + +0.7 1,794,304 - +0.7 1,794,304 - +0.5 1,794,516 + CA264_07740 0.33 +0.2 1,794,696 + CA264_07740 0.56 +0.3 1,794,696 + CA264_07740 0.56 +0.1 1,794,699 + CA264_07740 0.56 +0.0 1,794,723 + CA264_07740 0.60 -0.5 1,794,800 + CA264_07740 0.69 -0.6 1,794,801 - CA264_07740 0.70 -1.0 1,794,801 - CA264_07740 0.70 +0.5 1,794,884 + CA264_07740 0.80 +0.9 1,794,885 - CA264_07740 0.80 +0.2 1,794,885 - CA264_07740 0.80 +0.9 1,794,964 + -0.2 1,794,965 - -0.1 1,795,034 + -0.4 1,795,034 + -0.3 1,795,034 + -0.8 1,795,034 + +1.1 1,795,035 - +0.3 1,795,035 - -0.8
Or see this region's nucleotide sequence