Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07180 and CA264_07185 overlap by 8 nucleotides CA264_07185 and CA264_07190 are separated by 292 nucleotides CA264_07190 and CA264_07195 are separated by 77 nucleotides CA264_07195 and CA264_07200 are separated by 316 nucleotides
CA264_07180: CA264_07180 - transporter, at 1,659,468 to 1,660,811
_07180
CA264_07185: CA264_07185 - TetR family transcriptional regulator, at 1,660,804 to 1,661,439
_07185
CA264_07190: CA264_07190 - hypothetical protein, at 1,661,732 to 1,662,331
_07190
CA264_07195: CA264_07195 - hypothetical protein, at 1,662,409 to 1,662,903
_07195
CA264_07200: CA264_07200 - glutamate dehydrogenase, at 1,663,220 to 1,664,644
_07200
Position (kb)
1661
1662
1663 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1660.806 kb on - strand at 1660.826 kb on - strand at 1660.836 kb on + strand at 1660.851 kb on + strand at 1660.955 kb on + strand, within CA264_07185 at 1660.969 kb on + strand, within CA264_07185 at 1660.996 kb on + strand, within CA264_07185 at 1660.996 kb on + strand, within CA264_07185 at 1661.004 kb on + strand, within CA264_07185 at 1661.080 kb on - strand, within CA264_07185 at 1661.081 kb on + strand, within CA264_07185 at 1661.081 kb on + strand, within CA264_07185 at 1661.082 kb on - strand, within CA264_07185 at 1661.133 kb on + strand, within CA264_07185 at 1661.168 kb on + strand, within CA264_07185 at 1661.169 kb on - strand, within CA264_07185 at 1661.169 kb on - strand, within CA264_07185 at 1661.169 kb on - strand, within CA264_07185 at 1661.301 kb on - strand, within CA264_07185 at 1661.307 kb on + strand, within CA264_07185 at 1661.307 kb on + strand, within CA264_07185 at 1661.307 kb on + strand, within CA264_07185 at 1661.307 kb on + strand, within CA264_07185 at 1661.308 kb on - strand, within CA264_07185 at 1661.500 kb on + strand at 1661.583 kb on + strand at 1661.594 kb on + strand at 1661.594 kb on + strand at 1661.594 kb on + strand at 1661.594 kb on + strand at 1661.658 kb on - strand at 1661.665 kb on + strand at 1661.672 kb on - strand at 1661.682 kb on + strand at 1661.739 kb on + strand at 1661.756 kb on + strand at 1661.756 kb on + strand at 1661.783 kb on - strand at 1661.824 kb on + strand, within CA264_07190 at 1661.825 kb on - strand, within CA264_07190 at 1661.864 kb on - strand, within CA264_07190 at 1661.884 kb on - strand, within CA264_07190 at 1661.950 kb on + strand, within CA264_07190 at 1661.983 kb on + strand, within CA264_07190 at 1661.983 kb on + strand, within CA264_07190 at 1662.000 kb on + strand, within CA264_07190 at 1662.000 kb on + strand, within CA264_07190 at 1662.004 kb on + strand, within CA264_07190 at 1662.004 kb on + strand, within CA264_07190 at 1662.004 kb on + strand, within CA264_07190 at 1662.004 kb on + strand, within CA264_07190 at 1662.004 kb on + strand, within CA264_07190 at 1662.005 kb on - strand, within CA264_07190 at 1662.005 kb on - strand, within CA264_07190 at 1662.010 kb on - strand, within CA264_07190 at 1662.026 kb on + strand, within CA264_07190 at 1662.026 kb on + strand, within CA264_07190 at 1662.033 kb on + strand, within CA264_07190 at 1662.034 kb on - strand, within CA264_07190 at 1662.089 kb on + strand, within CA264_07190 at 1662.116 kb on - strand, within CA264_07190 at 1662.252 kb on - strand, within CA264_07190 at 1662.376 kb on - strand at 1662.376 kb on - strand at 1662.402 kb on + strand at 1662.405 kb on + strand at 1662.447 kb on - strand at 1662.581 kb on - strand, within CA264_07195 at 1662.708 kb on + strand, within CA264_07195 at 1662.812 kb on + strand, within CA264_07195 at 1662.813 kb on - strand, within CA264_07195 at 1662.937 kb on + strand at 1662.937 kb on + strand at 1662.938 kb on - strand at 1662.949 kb on + strand at 1662.952 kb on - strand at 1663.002 kb on + strand at 1663.047 kb on + strand at 1663.047 kb on + strand at 1663.070 kb on + strand at 1663.071 kb on - strand at 1663.072 kb on + strand at 1663.072 kb on + strand at 1663.072 kb on + strand at 1663.073 kb on - strand at 1663.075 kb on + strand at 1663.076 kb on - strand at 1663.087 kb on - strand at 1663.090 kb on + strand at 1663.090 kb on + strand at 1663.092 kb on + strand at 1663.094 kb on + strand at 1663.094 kb on + strand at 1663.094 kb on + strand at 1663.095 kb on - strand at 1663.119 kb on + strand at 1663.184 kb on - strand at 1663.212 kb on - strand at 1663.220 kb on - strand at 1663.220 kb on - strand at 1663.272 kb on - strand at 1663.293 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 1,660,806 - +0.3 1,660,826 - +0.1 1,660,836 + -0.1 1,660,851 + -1.2 1,660,955 + CA264_07185 0.24 -0.6 1,660,969 + CA264_07185 0.26 -0.4 1,660,996 + CA264_07185 0.30 -0.1 1,660,996 + CA264_07185 0.30 -0.1 1,661,004 + CA264_07185 0.31 +1.4 1,661,080 - CA264_07185 0.43 -3.9 1,661,081 + CA264_07185 0.44 -0.1 1,661,081 + CA264_07185 0.44 +0.7 1,661,082 - CA264_07185 0.44 -3.4 1,661,133 + CA264_07185 0.52 -0.7 1,661,168 + CA264_07185 0.57 -0.2 1,661,169 - CA264_07185 0.57 -0.6 1,661,169 - CA264_07185 0.57 -2.8 1,661,169 - CA264_07185 0.57 -4.7 1,661,301 - CA264_07185 0.78 -2.2 1,661,307 + CA264_07185 0.79 -1.7 1,661,307 + CA264_07185 0.79 -0.8 1,661,307 + CA264_07185 0.79 -0.7 1,661,307 + CA264_07185 0.79 -0.7 1,661,308 - CA264_07185 0.79 -2.2 1,661,500 + -0.7 1,661,583 + -0.7 1,661,594 + -1.4 1,661,594 + -0.7 1,661,594 + -0.3 1,661,594 + -2.5 1,661,658 - -3.2 1,661,665 + +0.8 1,661,672 - -3.7 1,661,682 + +0.6 1,661,739 + -0.7 1,661,756 + -1.0 1,661,756 + -1.3 1,661,783 - -2.3 1,661,824 + CA264_07190 0.15 -1.1 1,661,825 - CA264_07190 0.15 -2.4 1,661,864 - CA264_07190 0.22 -1.4 1,661,884 - CA264_07190 0.25 -3.8 1,661,950 + CA264_07190 0.36 -0.8 1,661,983 + CA264_07190 0.42 -1.1 1,661,983 + CA264_07190 0.42 +0.7 1,662,000 + CA264_07190 0.45 -0.2 1,662,000 + CA264_07190 0.45 +0.8 1,662,004 + CA264_07190 0.45 -0.8 1,662,004 + CA264_07190 0.45 -0.7 1,662,004 + CA264_07190 0.45 +0.2 1,662,004 + CA264_07190 0.45 -0.8 1,662,004 + CA264_07190 0.45 -1.5 1,662,005 - CA264_07190 0.46 -1.3 1,662,005 - CA264_07190 0.46 -2.6 1,662,010 - CA264_07190 0.46 -0.8 1,662,026 + CA264_07190 0.49 -0.5 1,662,026 + CA264_07190 0.49 -0.6 1,662,033 + CA264_07190 0.50 +0.2 1,662,034 - CA264_07190 0.50 -1.0 1,662,089 + CA264_07190 0.59 +0.2 1,662,116 - CA264_07190 0.64 -2.4 1,662,252 - CA264_07190 0.87 -0.6 1,662,376 - +0.8 1,662,376 - +0.4 1,662,402 + +0.0 1,662,405 + +0.4 1,662,447 - -0.1 1,662,581 - CA264_07195 0.35 -0.2 1,662,708 + CA264_07195 0.60 -1.6 1,662,812 + CA264_07195 0.81 -0.9 1,662,813 - CA264_07195 0.82 -0.2 1,662,937 + +0.2 1,662,937 + +0.3 1,662,938 - +0.7 1,662,949 + -0.0 1,662,952 - +0.2 1,663,002 + -0.6 1,663,047 + -0.1 1,663,047 + -2.2 1,663,070 + +0.0 1,663,071 - -1.6 1,663,072 + -1.6 1,663,072 + -0.1 1,663,072 + -0.0 1,663,073 - -1.1 1,663,075 + +0.7 1,663,076 - +0.4 1,663,087 - -0.9 1,663,090 + +2.0 1,663,090 + -0.0 1,663,092 + +1.5 1,663,094 + -0.2 1,663,094 + +0.2 1,663,094 + +1.6 1,663,095 - -0.6 1,663,119 + -0.2 1,663,184 - -0.8 1,663,212 - +0.4 1,663,220 - +0.8 1,663,220 - -0.2 1,663,272 - +0.1 1,663,293 - +0.6
Or see this region's nucleotide sequence