Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07025 and CA264_07030 are separated by 37 nucleotides CA264_07030 and CA264_07035 overlap by 4 nucleotides
CA264_07025: CA264_07025 - inositol-3-phosphate synthase, at 1,619,367 to 1,620,695
_07025
CA264_07030: CA264_07030 - UDP-glucose 4-epimerase, at 1,620,733 to 1,621,725
_07030
CA264_07035: CA264_07035 - hypothetical protein, at 1,621,722 to 1,622,843
_07035
Position (kb)
1620
1621
1622 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1619.761 kb on + strand, within CA264_07025 at 1619.762 kb on - strand, within CA264_07025 at 1619.762 kb on - strand, within CA264_07025 at 1619.882 kb on + strand, within CA264_07025 at 1619.883 kb on - strand, within CA264_07025 at 1619.883 kb on - strand, within CA264_07025 at 1619.985 kb on - strand, within CA264_07025 at 1620.091 kb on + strand, within CA264_07025 at 1620.091 kb on + strand, within CA264_07025 at 1620.181 kb on + strand, within CA264_07025 at 1620.191 kb on + strand, within CA264_07025 at 1620.280 kb on + strand, within CA264_07025 at 1620.280 kb on + strand, within CA264_07025 at 1620.281 kb on - strand, within CA264_07025 at 1620.281 kb on - strand, within CA264_07025 at 1620.284 kb on + strand, within CA264_07025 at 1620.284 kb on + strand, within CA264_07025 at 1620.284 kb on + strand, within CA264_07025 at 1620.328 kb on + strand, within CA264_07025 at 1620.328 kb on + strand, within CA264_07025 at 1620.329 kb on - strand, within CA264_07025 at 1620.434 kb on - strand, within CA264_07025 at 1620.434 kb on - strand, within CA264_07025 at 1620.615 kb on + strand at 1620.616 kb on - strand at 1620.682 kb on - strand at 1620.689 kb on - strand at 1620.724 kb on - strand at 1620.745 kb on - strand at 1620.763 kb on + strand at 1620.986 kb on - strand, within CA264_07030 at 1621.025 kb on + strand, within CA264_07030 at 1621.049 kb on + strand, within CA264_07030 at 1621.050 kb on - strand, within CA264_07030 at 1621.050 kb on - strand, within CA264_07030 at 1621.050 kb on - strand, within CA264_07030 at 1621.113 kb on - strand, within CA264_07030 at 1621.149 kb on - strand, within CA264_07030 at 1621.149 kb on - strand, within CA264_07030 at 1621.149 kb on - strand, within CA264_07030 at 1621.186 kb on - strand, within CA264_07030 at 1621.211 kb on + strand, within CA264_07030 at 1621.265 kb on + strand, within CA264_07030 at 1621.266 kb on - strand, within CA264_07030 at 1621.296 kb on - strand, within CA264_07030 at 1621.331 kb on - strand, within CA264_07030 at 1621.332 kb on + strand, within CA264_07030 at 1621.406 kb on - strand, within CA264_07030 at 1621.514 kb on + strand, within CA264_07030 at 1621.520 kb on + strand, within CA264_07030 at 1621.543 kb on + strand, within CA264_07030 at 1621.579 kb on - strand, within CA264_07030 at 1621.580 kb on + strand, within CA264_07030 at 1621.581 kb on - strand, within CA264_07030 at 1621.581 kb on - strand, within CA264_07030 at 1621.585 kb on + strand, within CA264_07030 at 1621.586 kb on - strand, within CA264_07030 at 1621.637 kb on + strand at 1621.639 kb on + strand at 1621.639 kb on + strand at 1621.640 kb on - strand at 1621.648 kb on - strand at 1621.726 kb on - strand at 1621.748 kb on - strand at 1621.756 kb on + strand at 1621.756 kb on + strand at 1621.757 kb on - strand at 1621.873 kb on + strand, within CA264_07035 at 1621.965 kb on + strand, within CA264_07035 at 1621.966 kb on - strand, within CA264_07035 at 1621.970 kb on + strand, within CA264_07035 at 1621.970 kb on + strand, within CA264_07035 at 1621.970 kb on + strand, within CA264_07035 at 1621.971 kb on - strand, within CA264_07035 at 1621.971 kb on - strand, within CA264_07035 at 1622.026 kb on - strand, within CA264_07035 at 1622.036 kb on + strand, within CA264_07035 at 1622.077 kb on - strand, within CA264_07035 at 1622.126 kb on - strand, within CA264_07035 at 1622.186 kb on - strand, within CA264_07035 at 1622.218 kb on + strand, within CA264_07035 at 1622.218 kb on + strand, within CA264_07035 at 1622.219 kb on - strand, within CA264_07035 at 1622.219 kb on - strand, within CA264_07035 at 1622.250 kb on - strand, within CA264_07035 at 1622.277 kb on + strand, within CA264_07035 at 1622.278 kb on - strand, within CA264_07035 at 1622.308 kb on + strand, within CA264_07035 at 1622.386 kb on + strand, within CA264_07035 at 1622.387 kb on - strand, within CA264_07035 at 1622.392 kb on + strand, within CA264_07035 at 1622.398 kb on + strand, within CA264_07035
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 1,619,761 + CA264_07025 0.30 -0.2 1,619,762 - CA264_07025 0.30 -0.5 1,619,762 - CA264_07025 0.30 +0.3 1,619,882 + CA264_07025 0.39 -0.6 1,619,883 - CA264_07025 0.39 +2.4 1,619,883 - CA264_07025 0.39 -1.1 1,619,985 - CA264_07025 0.47 -0.2 1,620,091 + CA264_07025 0.54 +0.2 1,620,091 + CA264_07025 0.54 -0.2 1,620,181 + CA264_07025 0.61 -0.3 1,620,191 + CA264_07025 0.62 -0.6 1,620,280 + CA264_07025 0.69 -0.9 1,620,280 + CA264_07025 0.69 -0.2 1,620,281 - CA264_07025 0.69 -1.6 1,620,281 - CA264_07025 0.69 -0.4 1,620,284 + CA264_07025 0.69 -0.8 1,620,284 + CA264_07025 0.69 -0.4 1,620,284 + CA264_07025 0.69 +1.0 1,620,328 + CA264_07025 0.72 -0.9 1,620,328 + CA264_07025 0.72 +0.2 1,620,329 - CA264_07025 0.72 -0.3 1,620,434 - CA264_07025 0.80 -0.5 1,620,434 - CA264_07025 0.80 -0.3 1,620,615 + -0.3 1,620,616 - -0.5 1,620,682 - -1.3 1,620,689 - -0.2 1,620,724 - +0.0 1,620,745 - -3.2 1,620,763 + -0.6 1,620,986 - CA264_07030 0.25 -2.6 1,621,025 + CA264_07030 0.29 -2.1 1,621,049 + CA264_07030 0.32 -1.7 1,621,050 - CA264_07030 0.32 -2.5 1,621,050 - CA264_07030 0.32 -2.7 1,621,050 - CA264_07030 0.32 -1.6 1,621,113 - CA264_07030 0.38 -2.0 1,621,149 - CA264_07030 0.42 -2.0 1,621,149 - CA264_07030 0.42 -1.8 1,621,149 - CA264_07030 0.42 -2.3 1,621,186 - CA264_07030 0.46 -2.7 1,621,211 + CA264_07030 0.48 -2.7 1,621,265 + CA264_07030 0.54 -2.4 1,621,266 - CA264_07030 0.54 -1.8 1,621,296 - CA264_07030 0.57 -0.9 1,621,331 - CA264_07030 0.60 -2.3 1,621,332 + CA264_07030 0.60 -2.7 1,621,406 - CA264_07030 0.68 -1.9 1,621,514 + CA264_07030 0.79 -2.6 1,621,520 + CA264_07030 0.79 -2.0 1,621,543 + CA264_07030 0.82 -0.1 1,621,579 - CA264_07030 0.85 -1.4 1,621,580 + CA264_07030 0.85 -0.7 1,621,581 - CA264_07030 0.85 -2.0 1,621,581 - CA264_07030 0.85 -2.2 1,621,585 + CA264_07030 0.86 -1.7 1,621,586 - CA264_07030 0.86 -3.1 1,621,637 + -2.7 1,621,639 + -1.3 1,621,639 + -2.9 1,621,640 - -1.1 1,621,648 - -2.5 1,621,726 - -0.3 1,621,748 - -2.0 1,621,756 + -1.9 1,621,756 + -1.1 1,621,757 - +0.6 1,621,873 + CA264_07035 0.13 -1.0 1,621,965 + CA264_07035 0.22 -0.4 1,621,966 - CA264_07035 0.22 -0.6 1,621,970 + CA264_07035 0.22 -0.9 1,621,970 + CA264_07035 0.22 -2.5 1,621,970 + CA264_07035 0.22 -1.3 1,621,971 - CA264_07035 0.22 -2.2 1,621,971 - CA264_07035 0.22 -3.5 1,622,026 - CA264_07035 0.27 -3.0 1,622,036 + CA264_07035 0.28 -0.3 1,622,077 - CA264_07035 0.32 +0.1 1,622,126 - CA264_07035 0.36 -1.2 1,622,186 - CA264_07035 0.41 -0.8 1,622,218 + CA264_07035 0.44 -1.7 1,622,218 + CA264_07035 0.44 -0.7 1,622,219 - CA264_07035 0.44 -1.2 1,622,219 - CA264_07035 0.44 -0.3 1,622,250 - CA264_07035 0.47 -2.7 1,622,277 + CA264_07035 0.49 -0.6 1,622,278 - CA264_07035 0.50 -0.1 1,622,308 + CA264_07035 0.52 -1.1 1,622,386 + CA264_07035 0.59 +0.1 1,622,387 - CA264_07035 0.59 -0.1 1,622,392 + CA264_07035 0.60 +0.4 1,622,398 + CA264_07035 0.60 -0.6
Or see this region's nucleotide sequence