Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06730 and CA264_06735 are separated by 199 nucleotides CA264_06735 and CA264_06740 overlap by 8 nucleotides CA264_06740 and CA264_06745 are separated by 202 nucleotides
CA264_06730: CA264_06730 - hypothetical protein, at 1,558,091 to 1,559,287
_06730
CA264_06735: CA264_06735 - hypothetical protein, at 1,559,487 to 1,559,816
_06735
CA264_06740: CA264_06740 - hypothetical protein, at 1,559,809 to 1,560,258
_06740
CA264_06745: CA264_06745 - hypothetical protein, at 1,560,461 to 1,561,717
_06745
Position (kb)
1559
1560 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1558.559 kb on - strand, within CA264_06730 at 1558.562 kb on + strand, within CA264_06730 at 1558.636 kb on + strand, within CA264_06730 at 1558.637 kb on - strand, within CA264_06730 at 1558.656 kb on - strand, within CA264_06730 at 1558.787 kb on + strand, within CA264_06730 at 1558.806 kb on - strand, within CA264_06730 at 1558.887 kb on - strand, within CA264_06730 at 1558.949 kb on + strand, within CA264_06730 at 1558.962 kb on + strand, within CA264_06730 at 1558.963 kb on - strand, within CA264_06730 at 1558.986 kb on - strand, within CA264_06730 at 1559.007 kb on + strand, within CA264_06730 at 1559.223 kb on - strand at 1559.304 kb on + strand at 1559.359 kb on + strand at 1559.363 kb on + strand at 1559.367 kb on + strand at 1559.367 kb on + strand at 1559.368 kb on - strand at 1559.368 kb on - strand at 1559.370 kb on + strand at 1559.419 kb on + strand at 1559.475 kb on + strand at 1559.476 kb on - strand at 1559.506 kb on + strand at 1559.507 kb on - strand at 1559.512 kb on + strand at 1559.513 kb on - strand at 1559.537 kb on + strand, within CA264_06735 at 1559.585 kb on - strand, within CA264_06735 at 1559.585 kb on - strand, within CA264_06735 at 1559.589 kb on + strand, within CA264_06735 at 1559.590 kb on - strand, within CA264_06735 at 1559.591 kb on + strand, within CA264_06735 at 1559.593 kb on + strand, within CA264_06735 at 1559.593 kb on + strand, within CA264_06735 at 1559.593 kb on + strand, within CA264_06735 at 1559.593 kb on + strand, within CA264_06735 at 1559.594 kb on - strand, within CA264_06735 at 1559.710 kb on + strand, within CA264_06735 at 1559.746 kb on + strand, within CA264_06735 at 1559.751 kb on + strand, within CA264_06735 at 1559.752 kb on - strand, within CA264_06735 at 1559.753 kb on + strand, within CA264_06735 at 1559.754 kb on - strand, within CA264_06735 at 1559.786 kb on + strand at 1559.789 kb on + strand at 1559.790 kb on - strand at 1559.795 kb on + strand at 1559.796 kb on - strand at 1559.800 kb on + strand at 1559.876 kb on - strand, within CA264_06740 at 1559.878 kb on + strand, within CA264_06740 at 1559.878 kb on + strand, within CA264_06740 at 1559.913 kb on - strand, within CA264_06740 at 1559.919 kb on + strand, within CA264_06740 at 1559.956 kb on - strand, within CA264_06740 at 1559.962 kb on + strand, within CA264_06740 at 1560.020 kb on - strand, within CA264_06740 at 1560.079 kb on + strand, within CA264_06740 at 1560.137 kb on + strand, within CA264_06740 at 1560.138 kb on - strand, within CA264_06740 at 1560.142 kb on + strand, within CA264_06740 at 1560.143 kb on - strand, within CA264_06740 at 1560.256 kb on + strand at 1560.256 kb on + strand at 1560.257 kb on - strand at 1560.368 kb on - strand at 1560.376 kb on - strand at 1560.415 kb on - strand at 1560.421 kb on + strand at 1560.421 kb on + strand at 1560.430 kb on + strand at 1560.431 kb on - strand at 1560.443 kb on - strand at 1560.470 kb on - strand at 1560.502 kb on + strand at 1560.503 kb on - strand at 1560.618 kb on + strand, within CA264_06745 at 1560.642 kb on + strand, within CA264_06745 at 1560.642 kb on + strand, within CA264_06745 at 1560.643 kb on - strand, within CA264_06745 at 1560.643 kb on - strand, within CA264_06745 at 1560.643 kb on - strand, within CA264_06745 at 1560.666 kb on + strand, within CA264_06745 at 1560.774 kb on - strand, within CA264_06745 at 1560.778 kb on - strand, within CA264_06745 at 1560.793 kb on - strand, within CA264_06745
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 1,558,559 - CA264_06730 0.39 +0.1 1,558,562 + CA264_06730 0.39 -0.3 1,558,636 + CA264_06730 0.46 +0.6 1,558,637 - CA264_06730 0.46 -0.1 1,558,656 - CA264_06730 0.47 -1.7 1,558,787 + CA264_06730 0.58 +0.4 1,558,806 - CA264_06730 0.60 -0.0 1,558,887 - CA264_06730 0.66 +0.3 1,558,949 + CA264_06730 0.72 +1.3 1,558,962 + CA264_06730 0.73 -0.1 1,558,963 - CA264_06730 0.73 +1.8 1,558,986 - CA264_06730 0.75 +0.1 1,559,007 + CA264_06730 0.77 -0.2 1,559,223 - -0.5 1,559,304 + -0.0 1,559,359 + -1.3 1,559,363 + +0.2 1,559,367 + +1.2 1,559,367 + +0.9 1,559,368 - -1.6 1,559,368 - +1.3 1,559,370 + -0.7 1,559,419 + -0.2 1,559,475 + -0.3 1,559,476 - +1.4 1,559,506 + +1.8 1,559,507 - +0.5 1,559,512 + -0.2 1,559,513 - -0.1 1,559,537 + CA264_06735 0.15 -2.7 1,559,585 - CA264_06735 0.30 -0.4 1,559,585 - CA264_06735 0.30 +0.2 1,559,589 + CA264_06735 0.31 -0.1 1,559,590 - CA264_06735 0.31 -0.5 1,559,591 + CA264_06735 0.32 -0.5 1,559,593 + CA264_06735 0.32 +0.2 1,559,593 + CA264_06735 0.32 -0.5 1,559,593 + CA264_06735 0.32 -0.6 1,559,593 + CA264_06735 0.32 -0.6 1,559,594 - CA264_06735 0.32 -0.1 1,559,710 + CA264_06735 0.68 -0.7 1,559,746 + CA264_06735 0.78 -0.1 1,559,751 + CA264_06735 0.80 -0.3 1,559,752 - CA264_06735 0.80 -0.4 1,559,753 + CA264_06735 0.81 +0.1 1,559,754 - CA264_06735 0.81 +0.2 1,559,786 + -2.1 1,559,789 + +1.3 1,559,790 - -0.6 1,559,795 + -0.0 1,559,796 - +0.4 1,559,800 + -0.4 1,559,876 - CA264_06740 0.15 +1.3 1,559,878 + CA264_06740 0.15 -1.0 1,559,878 + CA264_06740 0.15 +1.4 1,559,913 - CA264_06740 0.23 +1.6 1,559,919 + CA264_06740 0.24 +0.1 1,559,956 - CA264_06740 0.33 -0.4 1,559,962 + CA264_06740 0.34 +0.4 1,560,020 - CA264_06740 0.47 -0.4 1,560,079 + CA264_06740 0.60 -0.2 1,560,137 + CA264_06740 0.73 +0.0 1,560,138 - CA264_06740 0.73 +0.2 1,560,142 + CA264_06740 0.74 -0.3 1,560,143 - CA264_06740 0.74 +0.8 1,560,256 + -0.7 1,560,256 + -0.1 1,560,257 - -0.5 1,560,368 - +0.2 1,560,376 - +0.3 1,560,415 - +0.4 1,560,421 + +0.0 1,560,421 + -1.3 1,560,430 + -0.5 1,560,431 - +0.4 1,560,443 - +0.3 1,560,470 - -0.1 1,560,502 + -0.4 1,560,503 - +0.1 1,560,618 + CA264_06745 0.12 +0.2 1,560,642 + CA264_06745 0.14 -0.1 1,560,642 + CA264_06745 0.14 -0.2 1,560,643 - CA264_06745 0.14 -0.8 1,560,643 - CA264_06745 0.14 +1.3 1,560,643 - CA264_06745 0.14 +1.3 1,560,666 + CA264_06745 0.16 +0.4 1,560,774 - CA264_06745 0.25 -1.3 1,560,778 - CA264_06745 0.25 +1.0 1,560,793 - CA264_06745 0.26 -0.5
Or see this region's nucleotide sequence