Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06670 and CA264_06675 are separated by 100 nucleotides CA264_06675 and CA264_06680 are separated by 586 nucleotides CA264_06680 and CA264_06685 are separated by 94 nucleotides
CA264_06670: CA264_06670 - hypothetical protein, at 1,537,765 to 1,539,279
_06670
CA264_06675: CA264_06675 - AraC family transcriptional regulator, at 1,539,380 to 1,540,309
_06675
CA264_06680: CA264_06680 - 5S ribosomal RNA, at 1,540,896 to 1,541,007
_06680
CA264_06685: CA264_06685 - 23S ribosomal RNA, at 1,541,102 to 1,543,987
_06685
Position (kb)
1539
1540
1541 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1538.439 kb on - strand, within CA264_06670 at 1538.530 kb on - strand, within CA264_06670 at 1538.561 kb on + strand, within CA264_06670 at 1538.562 kb on - strand, within CA264_06670 at 1538.565 kb on - strand, within CA264_06670 at 1538.565 kb on - strand, within CA264_06670 at 1538.565 kb on - strand, within CA264_06670 at 1538.565 kb on - strand, within CA264_06670 at 1538.579 kb on - strand, within CA264_06670 at 1538.601 kb on - strand, within CA264_06670 at 1538.674 kb on - strand, within CA264_06670 at 1538.689 kb on + strand, within CA264_06670 at 1538.690 kb on - strand, within CA264_06670 at 1538.728 kb on + strand, within CA264_06670 at 1538.729 kb on - strand at 1538.762 kb on + strand, within CA264_06670 at 1538.763 kb on - strand, within CA264_06670 at 1538.932 kb on - strand, within CA264_06670 at 1538.933 kb on + strand, within CA264_06670 at 1538.933 kb on + strand, within CA264_06670 at 1538.934 kb on - strand, within CA264_06670 at 1539.078 kb on + strand, within CA264_06670 at 1539.238 kb on - strand at 1539.253 kb on + strand at 1539.253 kb on + strand at 1539.349 kb on - strand at 1539.382 kb on - strand at 1539.453 kb on + strand at 1539.454 kb on - strand at 1539.652 kb on - strand, within CA264_06675 at 1539.652 kb on - strand, within CA264_06675 at 1539.652 kb on - strand, within CA264_06675 at 1539.659 kb on - strand, within CA264_06675 at 1539.676 kb on + strand, within CA264_06675 at 1539.676 kb on + strand, within CA264_06675 at 1539.676 kb on + strand, within CA264_06675 at 1539.677 kb on - strand, within CA264_06675 at 1539.689 kb on + strand, within CA264_06675 at 1539.695 kb on + strand, within CA264_06675 at 1539.695 kb on + strand, within CA264_06675 at 1539.771 kb on + strand, within CA264_06675 at 1539.889 kb on + strand, within CA264_06675 at 1539.926 kb on - strand, within CA264_06675 at 1539.976 kb on + strand, within CA264_06675 at 1539.989 kb on + strand, within CA264_06675 at 1540.071 kb on - strand, within CA264_06675 at 1540.082 kb on + strand, within CA264_06675 at 1540.099 kb on + strand, within CA264_06675 at 1540.099 kb on + strand, within CA264_06675 at 1540.100 kb on - strand, within CA264_06675 at 1540.100 kb on - strand, within CA264_06675 at 1540.100 kb on - strand, within CA264_06675 at 1540.154 kb on + strand, within CA264_06675 at 1540.154 kb on + strand, within CA264_06675 at 1540.154 kb on + strand, within CA264_06675 at 1540.223 kb on + strand at 1540.247 kb on - strand at 1540.262 kb on + strand at 1540.262 kb on + strand at 1540.272 kb on - strand at 1540.333 kb on + strand at 1540.334 kb on - strand at 1540.338 kb on - strand at 1540.338 kb on - strand at 1540.340 kb on - strand at 1540.389 kb on + strand at 1540.390 kb on - strand at 1540.396 kb on + strand at 1540.397 kb on - strand at 1540.397 kb on - strand at 1540.400 kb on - strand at 1540.400 kb on - strand at 1540.403 kb on + strand at 1540.417 kb on - strand at 1540.441 kb on + strand at 1540.442 kb on - strand at 1540.442 kb on - strand at 1540.448 kb on + strand at 1540.470 kb on - strand at 1540.477 kb on - strand at 1540.483 kb on - strand at 1540.499 kb on + strand at 1540.500 kb on - strand at 1540.574 kb on + strand at 1540.575 kb on - strand at 1540.578 kb on + strand at 1540.579 kb on - strand at 1540.597 kb on - strand at 1540.600 kb on - strand at 1540.601 kb on + strand at 1540.601 kb on + strand at 1540.617 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 1,538,439 - CA264_06670 0.44 -0.2 1,538,530 - CA264_06670 0.50 -0.8 1,538,561 + CA264_06670 0.53 +1.2 1,538,562 - CA264_06670 0.53 -0.7 1,538,565 - CA264_06670 0.53 -2.5 1,538,565 - CA264_06670 0.53 +0.2 1,538,565 - CA264_06670 0.53 +0.1 1,538,565 - CA264_06670 0.53 +0.6 1,538,579 - CA264_06670 0.54 +1.5 1,538,601 - CA264_06670 0.55 -0.0 1,538,674 - CA264_06670 0.60 +0.5 1,538,689 + CA264_06670 0.61 -0.7 1,538,690 - CA264_06670 0.61 -0.1 1,538,728 + CA264_06670 0.64 -0.3 1,538,729 - +2.2 1,538,762 + CA264_06670 0.66 -0.3 1,538,763 - CA264_06670 0.66 -1.1 1,538,932 - CA264_06670 0.77 +0.0 1,538,933 + CA264_06670 0.77 -0.1 1,538,933 + CA264_06670 0.77 -0.1 1,538,934 - CA264_06670 0.77 -0.4 1,539,078 + CA264_06670 0.87 -1.1 1,539,238 - -0.7 1,539,253 + -0.5 1,539,253 + +0.0 1,539,349 - +1.1 1,539,382 - -0.4 1,539,453 + +0.9 1,539,454 - -0.2 1,539,652 - CA264_06675 0.29 -0.1 1,539,652 - CA264_06675 0.29 -0.1 1,539,652 - CA264_06675 0.29 -0.2 1,539,659 - CA264_06675 0.30 +0.0 1,539,676 + CA264_06675 0.32 +0.9 1,539,676 + CA264_06675 0.32 -0.1 1,539,676 + CA264_06675 0.32 -2.1 1,539,677 - CA264_06675 0.32 +0.1 1,539,689 + CA264_06675 0.33 +0.1 1,539,695 + CA264_06675 0.34 -0.4 1,539,695 + CA264_06675 0.34 -0.1 1,539,771 + CA264_06675 0.42 -0.1 1,539,889 + CA264_06675 0.55 +1.2 1,539,926 - CA264_06675 0.59 +0.1 1,539,976 + CA264_06675 0.64 -0.1 1,539,989 + CA264_06675 0.65 -0.1 1,540,071 - CA264_06675 0.74 -0.1 1,540,082 + CA264_06675 0.75 -0.3 1,540,099 + CA264_06675 0.77 +0.2 1,540,099 + CA264_06675 0.77 -0.1 1,540,100 - CA264_06675 0.77 +1.0 1,540,100 - CA264_06675 0.77 +0.0 1,540,100 - CA264_06675 0.77 -0.2 1,540,154 + CA264_06675 0.83 +1.0 1,540,154 + CA264_06675 0.83 +1.3 1,540,154 + CA264_06675 0.83 -0.7 1,540,223 + +0.3 1,540,247 - +0.9 1,540,262 + -0.1 1,540,262 + -0.1 1,540,272 - -0.8 1,540,333 + +1.2 1,540,334 - -0.5 1,540,338 - +0.9 1,540,338 - -0.6 1,540,340 - +0.5 1,540,389 + -0.8 1,540,390 - -1.6 1,540,396 + -3.1 1,540,397 - +0.2 1,540,397 - -0.2 1,540,400 - -0.6 1,540,400 - -0.8 1,540,403 + -0.7 1,540,417 - -1.5 1,540,441 + +1.2 1,540,442 - +0.1 1,540,442 - -0.9 1,540,448 + +1.1 1,540,470 - -0.5 1,540,477 - +0.1 1,540,483 - +0.2 1,540,499 + +1.4 1,540,500 - -0.6 1,540,574 + -0.3 1,540,575 - -0.4 1,540,578 + -0.8 1,540,579 - +0.9 1,540,597 - -0.1 1,540,600 - -0.0 1,540,601 + +0.2 1,540,601 + -1.8 1,540,617 + -0.2
Or see this region's nucleotide sequence