Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06480 and CA264_06485 are separated by 74 nucleotides CA264_06485 and CA264_06490 are separated by 37 nucleotides
CA264_06480: CA264_06480 - threonine aldolase, at 1,497,841 to 1,498,887
_06480
CA264_06485: CA264_06485 - Fe-S cluster assembly protein HesB, at 1,498,962 to 1,499,591
_06485
CA264_06490: CA264_06490 - DNA topoisomerase I, at 1,499,629 to 1,500,714
_06490
Position (kb)
1498
1499
1500 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1498.047 kb on + strand, within CA264_06480 at 1498.076 kb on + strand, within CA264_06480 at 1498.076 kb on + strand, within CA264_06480 at 1498.173 kb on + strand, within CA264_06480 at 1498.218 kb on + strand, within CA264_06480 at 1498.295 kb on + strand, within CA264_06480 at 1498.322 kb on + strand, within CA264_06480 at 1498.322 kb on + strand, within CA264_06480 at 1498.323 kb on - strand, within CA264_06480 at 1498.323 kb on - strand, within CA264_06480 at 1498.323 kb on - strand, within CA264_06480 at 1498.396 kb on - strand, within CA264_06480 at 1498.409 kb on - strand, within CA264_06480 at 1498.415 kb on + strand, within CA264_06480 at 1498.415 kb on + strand, within CA264_06480 at 1498.415 kb on + strand, within CA264_06480 at 1498.415 kb on + strand, within CA264_06480 at 1498.416 kb on - strand, within CA264_06480 at 1498.417 kb on + strand, within CA264_06480 at 1498.426 kb on - strand, within CA264_06480 at 1498.455 kb on - strand, within CA264_06480 at 1498.482 kb on - strand, within CA264_06480 at 1498.576 kb on + strand, within CA264_06480 at 1498.577 kb on - strand, within CA264_06480 at 1498.596 kb on - strand, within CA264_06480 at 1498.661 kb on - strand, within CA264_06480 at 1498.661 kb on - strand, within CA264_06480 at 1498.664 kb on + strand, within CA264_06480 at 1498.664 kb on + strand, within CA264_06480 at 1498.665 kb on - strand, within CA264_06480 at 1498.665 kb on - strand, within CA264_06480 at 1498.665 kb on - strand, within CA264_06480 at 1498.686 kb on + strand, within CA264_06480 at 1498.764 kb on - strand, within CA264_06480 at 1498.764 kb on - strand, within CA264_06480 at 1498.764 kb on - strand, within CA264_06480 at 1498.794 kb on - strand at 1498.841 kb on + strand at 1499.026 kb on + strand, within CA264_06485 at 1499.033 kb on + strand, within CA264_06485 at 1499.036 kb on + strand, within CA264_06485 at 1499.081 kb on - strand, within CA264_06485 at 1499.083 kb on - strand, within CA264_06485 at 1499.102 kb on + strand, within CA264_06485 at 1499.102 kb on + strand, within CA264_06485 at 1499.103 kb on - strand, within CA264_06485 at 1499.156 kb on + strand, within CA264_06485 at 1499.179 kb on - strand, within CA264_06485 at 1499.197 kb on + strand, within CA264_06485 at 1499.201 kb on - strand, within CA264_06485 at 1499.201 kb on - strand, within CA264_06485 at 1499.236 kb on + strand, within CA264_06485 at 1499.257 kb on - strand, within CA264_06485 at 1499.259 kb on - strand, within CA264_06485 at 1499.264 kb on + strand, within CA264_06485 at 1499.365 kb on + strand, within CA264_06485 at 1499.404 kb on + strand, within CA264_06485 at 1499.437 kb on + strand, within CA264_06485 at 1499.466 kb on + strand, within CA264_06485 at 1499.466 kb on + strand, within CA264_06485 at 1499.495 kb on - strand, within CA264_06485 at 1499.495 kb on - strand, within CA264_06485 at 1499.540 kb on + strand at 1499.552 kb on + strand at 1499.553 kb on - strand at 1499.557 kb on - strand at 1499.557 kb on - strand at 1499.623 kb on - strand at 1499.623 kb on - strand at 1499.630 kb on + strand at 1499.630 kb on + strand at 1499.674 kb on + strand at 1499.697 kb on + strand at 1499.697 kb on + strand at 1499.742 kb on - strand, within CA264_06490 at 1499.763 kb on + strand, within CA264_06490 at 1499.788 kb on + strand, within CA264_06490 at 1499.788 kb on + strand, within CA264_06490 at 1499.789 kb on - strand, within CA264_06490 at 1499.789 kb on - strand, within CA264_06490 at 1499.793 kb on - strand, within CA264_06490 at 1499.793 kb on - strand, within CA264_06490 at 1499.795 kb on + strand, within CA264_06490 at 1499.796 kb on - strand, within CA264_06490 at 1499.811 kb on + strand, within CA264_06490 at 1499.860 kb on - strand, within CA264_06490 at 1499.959 kb on - strand, within CA264_06490 at 1499.988 kb on - strand, within CA264_06490 at 1499.988 kb on - strand, within CA264_06490 at 1499.994 kb on + strand, within CA264_06490 at 1499.995 kb on - strand, within CA264_06490 at 1500.010 kb on + strand, within CA264_06490 at 1500.010 kb on + strand, within CA264_06490 at 1500.011 kb on - strand, within CA264_06490 at 1500.041 kb on + strand, within CA264_06490 at 1500.042 kb on - strand, within CA264_06490 at 1500.042 kb on - strand, within CA264_06490 at 1500.050 kb on - strand, within CA264_06490 at 1500.145 kb on - strand, within CA264_06490 at 1500.151 kb on - strand, within CA264_06490 at 1500.201 kb on + strand, within CA264_06490 at 1500.318 kb on + strand, within CA264_06490 at 1500.318 kb on + strand, within CA264_06490 at 1500.318 kb on + strand, within CA264_06490 at 1500.390 kb on + strand, within CA264_06490 at 1500.423 kb on - strand, within CA264_06490 at 1500.496 kb on + strand, within CA264_06490 at 1500.497 kb on - strand, within CA264_06490 at 1500.580 kb on + strand, within CA264_06490 at 1500.587 kb on + strand, within CA264_06490
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 1,498,047 + CA264_06480 0.20 -1.3 1,498,076 + CA264_06480 0.22 -0.1 1,498,076 + CA264_06480 0.22 -1.2 1,498,173 + CA264_06480 0.32 -0.4 1,498,218 + CA264_06480 0.36 +1.1 1,498,295 + CA264_06480 0.43 -0.3 1,498,322 + CA264_06480 0.46 +0.1 1,498,322 + CA264_06480 0.46 -0.1 1,498,323 - CA264_06480 0.46 -1.5 1,498,323 - CA264_06480 0.46 -0.4 1,498,323 - CA264_06480 0.46 +0.3 1,498,396 - CA264_06480 0.53 -0.3 1,498,409 - CA264_06480 0.54 -0.2 1,498,415 + CA264_06480 0.55 +0.4 1,498,415 + CA264_06480 0.55 -1.1 1,498,415 + CA264_06480 0.55 +0.5 1,498,415 + CA264_06480 0.55 -0.2 1,498,416 - CA264_06480 0.55 -0.3 1,498,417 + CA264_06480 0.55 -0.6 1,498,426 - CA264_06480 0.56 +1.2 1,498,455 - CA264_06480 0.59 -1.5 1,498,482 - CA264_06480 0.61 -0.4 1,498,576 + CA264_06480 0.70 -1.4 1,498,577 - CA264_06480 0.70 +0.3 1,498,596 - CA264_06480 0.72 -0.5 1,498,661 - CA264_06480 0.78 -1.1 1,498,661 - CA264_06480 0.78 +0.3 1,498,664 + CA264_06480 0.79 +0.3 1,498,664 + CA264_06480 0.79 -1.2 1,498,665 - CA264_06480 0.79 -1.1 1,498,665 - CA264_06480 0.79 -0.6 1,498,665 - CA264_06480 0.79 -1.2 1,498,686 + CA264_06480 0.81 +0.7 1,498,764 - CA264_06480 0.88 -1.6 1,498,764 - CA264_06480 0.88 -0.2 1,498,764 - CA264_06480 0.88 -1.5 1,498,794 - -0.5 1,498,841 + +1.2 1,499,026 + CA264_06485 0.10 -0.4 1,499,033 + CA264_06485 0.11 -0.1 1,499,036 + CA264_06485 0.12 +2.5 1,499,081 - CA264_06485 0.19 -0.5 1,499,083 - CA264_06485 0.19 -0.3 1,499,102 + CA264_06485 0.22 -0.3 1,499,102 + CA264_06485 0.22 +0.5 1,499,103 - CA264_06485 0.22 -0.6 1,499,156 + CA264_06485 0.31 -0.6 1,499,179 - CA264_06485 0.34 -0.8 1,499,197 + CA264_06485 0.37 -0.8 1,499,201 - CA264_06485 0.38 +0.6 1,499,201 - CA264_06485 0.38 +0.2 1,499,236 + CA264_06485 0.43 +0.8 1,499,257 - CA264_06485 0.47 +0.6 1,499,259 - CA264_06485 0.47 -1.8 1,499,264 + CA264_06485 0.48 -0.1 1,499,365 + CA264_06485 0.64 -0.6 1,499,404 + CA264_06485 0.70 -1.6 1,499,437 + CA264_06485 0.75 -0.8 1,499,466 + CA264_06485 0.80 -0.3 1,499,466 + CA264_06485 0.80 +0.5 1,499,495 - CA264_06485 0.85 -0.8 1,499,495 - CA264_06485 0.85 -1.0 1,499,540 + +0.5 1,499,552 + -0.5 1,499,553 - -0.9 1,499,557 - +0.1 1,499,557 - -0.2 1,499,623 - -0.6 1,499,623 - -0.5 1,499,630 + -1.1 1,499,630 + -0.7 1,499,674 + +0.6 1,499,697 + +0.5 1,499,697 + +0.6 1,499,742 - CA264_06490 0.10 -0.6 1,499,763 + CA264_06490 0.12 -0.3 1,499,788 + CA264_06490 0.15 -1.3 1,499,788 + CA264_06490 0.15 -1.1 1,499,789 - CA264_06490 0.15 -0.5 1,499,789 - CA264_06490 0.15 -0.0 1,499,793 - CA264_06490 0.15 +0.6 1,499,793 - CA264_06490 0.15 -0.1 1,499,795 + CA264_06490 0.15 -0.7 1,499,796 - CA264_06490 0.15 +0.1 1,499,811 + CA264_06490 0.17 -2.2 1,499,860 - CA264_06490 0.21 -0.1 1,499,959 - CA264_06490 0.30 +1.0 1,499,988 - CA264_06490 0.33 -0.2 1,499,988 - CA264_06490 0.33 -0.1 1,499,994 + CA264_06490 0.34 -0.4 1,499,995 - CA264_06490 0.34 -0.5 1,500,010 + CA264_06490 0.35 -2.2 1,500,010 + CA264_06490 0.35 -0.4 1,500,011 - CA264_06490 0.35 +1.5 1,500,041 + CA264_06490 0.38 +0.0 1,500,042 - CA264_06490 0.38 -0.3 1,500,042 - CA264_06490 0.38 +2.8 1,500,050 - CA264_06490 0.39 -0.5 1,500,145 - CA264_06490 0.48 -1.0 1,500,151 - CA264_06490 0.48 -1.1 1,500,201 + CA264_06490 0.53 +0.2 1,500,318 + CA264_06490 0.63 -0.5 1,500,318 + CA264_06490 0.63 +0.2 1,500,318 + CA264_06490 0.63 -0.5 1,500,390 + CA264_06490 0.70 +0.0 1,500,423 - CA264_06490 0.73 -0.5 1,500,496 + CA264_06490 0.80 -0.6 1,500,497 - CA264_06490 0.80 +0.6 1,500,580 + CA264_06490 0.88 -0.2 1,500,587 + CA264_06490 0.88 -0.3
Or see this region's nucleotide sequence