Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_05375 and CA264_05380 are separated by 312 nucleotides CA264_05380 and CA264_05385 are separated by 82 nucleotides CA264_05385 and CA264_05390 are separated by 300 nucleotides
CA264_05375: CA264_05375 - hypothetical protein, at 1,246,680 to 1,248,476
_05375
CA264_05380: CA264_05380 - glutamine synthetase type III, at 1,248,789 to 1,250,978
_05380
CA264_05385: CA264_05385 - hypothetical protein, at 1,251,061 to 1,251,429
_05385
CA264_05390: CA264_05390 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, at 1,251,730 to 1,253,703
_05390
Position (kb)
1248
1249
1250
1251 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1247.815 kb on + strand, within CA264_05375 at 1248.028 kb on + strand, within CA264_05375 at 1248.036 kb on - strand, within CA264_05375 at 1248.263 kb on + strand, within CA264_05375 at 1248.264 kb on - strand, within CA264_05375 at 1248.265 kb on + strand, within CA264_05375 at 1248.266 kb on - strand, within CA264_05375 at 1248.266 kb on - strand, within CA264_05375 at 1248.269 kb on - strand, within CA264_05375 at 1248.269 kb on - strand, within CA264_05375 at 1248.269 kb on - strand, within CA264_05375 at 1248.336 kb on + strand at 1248.336 kb on + strand at 1248.336 kb on + strand at 1248.336 kb on + strand at 1248.337 kb on - strand at 1248.339 kb on - strand at 1248.339 kb on - strand at 1248.339 kb on - strand at 1248.341 kb on + strand at 1248.342 kb on - strand at 1248.342 kb on - strand at 1248.346 kb on + strand at 1248.346 kb on + strand at 1248.347 kb on - strand at 1248.380 kb on - strand at 1248.411 kb on - strand at 1248.437 kb on - strand at 1248.437 kb on - strand at 1248.438 kb on + strand at 1248.449 kb on + strand at 1248.460 kb on - strand at 1248.460 kb on - strand at 1248.462 kb on + strand at 1248.463 kb on - strand at 1248.465 kb on - strand at 1248.469 kb on + strand at 1248.470 kb on - strand at 1248.531 kb on - strand at 1248.537 kb on + strand at 1248.537 kb on + strand at 1248.539 kb on + strand at 1248.539 kb on + strand at 1248.540 kb on - strand at 1248.753 kb on - strand at 1250.996 kb on + strand at 1250.996 kb on + strand at 1251.020 kb on + strand at 1251.082 kb on + strand at 1251.083 kb on - strand at 1251.110 kb on - strand, within CA264_05385 at 1251.157 kb on + strand, within CA264_05385 at 1251.158 kb on - strand, within CA264_05385 at 1251.175 kb on + strand, within CA264_05385 at 1251.175 kb on + strand, within CA264_05385 at 1251.175 kb on + strand, within CA264_05385 at 1251.175 kb on + strand, within CA264_05385 at 1251.175 kb on + strand, within CA264_05385 at 1251.176 kb on - strand, within CA264_05385 at 1251.323 kb on - strand, within CA264_05385 at 1251.323 kb on - strand, within CA264_05385 at 1251.324 kb on + strand, within CA264_05385 at 1251.324 kb on + strand, within CA264_05385 at 1251.324 kb on + strand, within CA264_05385 at 1251.325 kb on - strand, within CA264_05385 at 1251.429 kb on + strand at 1251.500 kb on + strand at 1251.592 kb on + strand at 1251.597 kb on - strand at 1251.689 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 1,247,815 + CA264_05375 0.63 -0.3 1,248,028 + CA264_05375 0.75 -0.5 1,248,036 - CA264_05375 0.75 +0.1 1,248,263 + CA264_05375 0.88 -0.0 1,248,264 - CA264_05375 0.88 +0.5 1,248,265 + CA264_05375 0.88 +1.5 1,248,266 - CA264_05375 0.88 -2.1 1,248,266 - CA264_05375 0.88 +0.7 1,248,269 - CA264_05375 0.88 -1.3 1,248,269 - CA264_05375 0.88 -0.9 1,248,269 - CA264_05375 0.88 +2.0 1,248,336 + +1.0 1,248,336 + -0.4 1,248,336 + -0.1 1,248,336 + +0.0 1,248,337 - -0.8 1,248,339 - -0.1 1,248,339 - -0.7 1,248,339 - +0.5 1,248,341 + +0.3 1,248,342 - -0.3 1,248,342 - -0.7 1,248,346 + -1.8 1,248,346 + +0.8 1,248,347 - +0.2 1,248,380 - +0.0 1,248,411 - +0.1 1,248,437 - +0.0 1,248,437 - -0.0 1,248,438 + -0.3 1,248,449 + -0.7 1,248,460 - +0.1 1,248,460 - +0.3 1,248,462 + -0.5 1,248,463 - +0.2 1,248,465 - +0.1 1,248,469 + +0.8 1,248,470 - +2.0 1,248,531 - +0.5 1,248,537 + -0.5 1,248,537 + -0.2 1,248,539 + -0.3 1,248,539 + +1.3 1,248,540 - +0.1 1,248,753 - -0.2 1,250,996 + +0.2 1,250,996 + +0.0 1,251,020 + +0.1 1,251,082 + +0.4 1,251,083 - -2.0 1,251,110 - CA264_05385 0.13 +1.6 1,251,157 + CA264_05385 0.26 +1.5 1,251,158 - CA264_05385 0.26 +0.9 1,251,175 + CA264_05385 0.31 -0.3 1,251,175 + CA264_05385 0.31 -0.4 1,251,175 + CA264_05385 0.31 +1.0 1,251,175 + CA264_05385 0.31 -0.1 1,251,175 + CA264_05385 0.31 +0.2 1,251,176 - CA264_05385 0.31 +0.1 1,251,323 - CA264_05385 0.71 -0.5 1,251,323 - CA264_05385 0.71 -0.9 1,251,324 + CA264_05385 0.71 +0.7 1,251,324 + CA264_05385 0.71 -0.9 1,251,324 + CA264_05385 0.71 -0.2 1,251,325 - CA264_05385 0.72 -0.4 1,251,429 + -0.6 1,251,500 + +0.6 1,251,592 + -0.3 1,251,597 - +0.0 1,251,689 + +0.9
Or see this region's nucleotide sequence