Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_05320

Experiment: m.b. Chloride 750 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_05315 and CA264_05320 are separated by 179 nucleotidesCA264_05320 and CA264_05325 are separated by 6 nucleotides CA264_05315: CA264_05315 - tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB, at 1,231,542 to 1,232,972 _05315 CA264_05320: CA264_05320 - para-aminobenzoate synthase, at 1,233,152 to 1,234,441 _05320 CA264_05325: CA264_05325 - hypothetical protein, at 1,234,448 to 1,235,920 _05325 Position (kb) 1233 1234 1235Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1232.162 kb on + strand, within CA264_05315at 1232.260 kb on + strand, within CA264_05315at 1232.299 kb on + strand, within CA264_05315at 1232.300 kb on - strand, within CA264_05315at 1232.427 kb on - strand, within CA264_05315at 1232.427 kb on - strand, within CA264_05315at 1232.468 kb on + strand, within CA264_05315at 1232.672 kb on + strand, within CA264_05315at 1232.672 kb on + strand, within CA264_05315at 1232.672 kb on + strand, within CA264_05315at 1232.672 kb on + strand, within CA264_05315at 1232.673 kb on - strand, within CA264_05315at 1232.674 kb on + strand, within CA264_05315at 1232.675 kb on - strand, within CA264_05315at 1232.675 kb on - strand, within CA264_05315at 1232.675 kb on - strand, within CA264_05315at 1232.675 kb on - strand, within CA264_05315at 1232.677 kb on + strand, within CA264_05315at 1232.678 kb on - strand, within CA264_05315at 1232.804 kb on + strand, within CA264_05315at 1232.804 kb on + strand, within CA264_05315at 1232.804 kb on + strand, within CA264_05315at 1232.805 kb on - strand, within CA264_05315at 1232.848 kb on + strandat 1232.849 kb on - strandat 1232.849 kb on - strandat 1232.849 kb on - strandat 1232.860 kb on + strandat 1232.860 kb on + strandat 1232.944 kb on - strandat 1232.944 kb on - strandat 1232.953 kb on - strandat 1232.962 kb on - strandat 1232.962 kb on - strandat 1232.972 kb on + strandat 1232.972 kb on + strandat 1232.973 kb on - strandat 1232.975 kb on + strandat 1232.976 kb on - strandat 1232.984 kb on + strandat 1232.984 kb on + strandat 1232.984 kb on + strandat 1232.999 kb on - strandat 1233.001 kb on + strandat 1233.002 kb on + strandat 1233.002 kb on - strandat 1233.002 kb on - strandat 1233.002 kb on - strandat 1233.003 kb on + strandat 1233.003 kb on + strandat 1233.003 kb on + strandat 1233.003 kb on + strandat 1233.004 kb on - strandat 1233.052 kb on + strandat 1233.107 kb on + strandat 1233.114 kb on - strandat 1233.114 kb on - strandat 1233.134 kb on + strandat 1233.135 kb on - strandat 1233.135 kb on - strandat 1233.205 kb on - strandat 1233.229 kb on - strandat 1233.229 kb on - strandat 1233.333 kb on + strand, within CA264_05320at 1233.476 kb on + strand, within CA264_05320at 1233.525 kb on + strand, within CA264_05320at 1233.602 kb on + strand, within CA264_05320at 1233.602 kb on + strand, within CA264_05320at 1233.779 kb on + strand, within CA264_05320at 1233.831 kb on + strand, within CA264_05320at 1233.854 kb on + strand, within CA264_05320at 1233.854 kb on + strand, within CA264_05320at 1233.887 kb on + strand, within CA264_05320at 1233.887 kb on + strand, within CA264_05320at 1233.895 kb on - strand, within CA264_05320at 1233.933 kb on - strand, within CA264_05320at 1233.945 kb on + strand, within CA264_05320at 1234.130 kb on + strand, within CA264_05320at 1234.339 kb on - strandat 1234.424 kb on + strandat 1234.425 kb on - strandat 1234.446 kb on + strandat 1234.449 kb on + strandat 1234.450 kb on - strandat 1234.450 kb on - strandat 1234.529 kb on - strandat 1234.569 kb on + strandat 1234.573 kb on + strandat 1234.574 kb on - strandat 1234.574 kb on - strandat 1234.574 kb on - strandat 1234.575 kb on + strandat 1234.575 kb on + strandat 1234.586 kb on + strandat 1234.637 kb on - strand, within CA264_05325at 1234.637 kb on - strand, within CA264_05325at 1234.647 kb on + strand, within CA264_05325at 1234.648 kb on - strand, within CA264_05325at 1234.707 kb on + strand, within CA264_05325at 1234.708 kb on - strand, within CA264_05325at 1234.708 kb on - strand, within CA264_05325at 1234.708 kb on - strand, within CA264_05325at 1234.708 kb on - strand, within CA264_05325at 1234.711 kb on - strand, within CA264_05325at 1234.711 kb on - strand, within CA264_05325at 1234.711 kb on - strand, within CA264_05325at 1234.711 kb on - strand, within CA264_05325at 1234.745 kb on + strand, within CA264_05325at 1234.746 kb on - strand, within CA264_05325at 1234.910 kb on + strand, within CA264_05325at 1234.933 kb on + strand, within CA264_05325at 1234.966 kb on + strand, within CA264_05325at 1235.043 kb on + strand, within CA264_05325at 1235.044 kb on - strand, within CA264_05325at 1235.088 kb on + strand, within CA264_05325at 1235.103 kb on + strand, within CA264_05325at 1235.104 kb on - strand, within CA264_05325at 1235.130 kb on + strand, within CA264_05325at 1235.180 kb on - strand, within CA264_05325at 1235.198 kb on + strand, within CA264_05325at 1235.198 kb on + strand, within CA264_05325at 1235.198 kb on + strand, within CA264_05325at 1235.199 kb on - strand, within CA264_05325at 1235.199 kb on - strand, within CA264_05325at 1235.423 kb on + strand, within CA264_05325at 1235.424 kb on - strand, within CA264_05325at 1235.424 kb on - strand, within CA264_05325

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM
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1,232,162 + CA264_05315 0.43 -0.0
1,232,260 + CA264_05315 0.50 -0.4
1,232,299 + CA264_05315 0.53 +0.2
1,232,300 - CA264_05315 0.53 -0.2
1,232,427 - CA264_05315 0.62 -1.0
1,232,427 - CA264_05315 0.62 -1.0
1,232,468 + CA264_05315 0.65 -0.1
1,232,672 + CA264_05315 0.79 +0.5
1,232,672 + CA264_05315 0.79 +0.3
1,232,672 + CA264_05315 0.79 +0.3
1,232,672 + CA264_05315 0.79 +0.9
1,232,673 - CA264_05315 0.79 -0.5
1,232,674 + CA264_05315 0.79 -0.0
1,232,675 - CA264_05315 0.79 -0.0
1,232,675 - CA264_05315 0.79 -0.7
1,232,675 - CA264_05315 0.79 -0.1
1,232,675 - CA264_05315 0.79 -0.7
1,232,677 + CA264_05315 0.79 -1.7
1,232,678 - CA264_05315 0.79 -0.5
1,232,804 + CA264_05315 0.88 -0.3
1,232,804 + CA264_05315 0.88 -1.0
1,232,804 + CA264_05315 0.88 -0.8
1,232,805 - CA264_05315 0.88 -1.0
1,232,848 + +0.4
1,232,849 - -0.6
1,232,849 - -0.1
1,232,849 - -0.3
1,232,860 + -0.1
1,232,860 + -0.4
1,232,944 - +0.5
1,232,944 - -0.4
1,232,953 - -1.1
1,232,962 - +0.6
1,232,962 - -1.0
1,232,972 + -0.1
1,232,972 + -0.2
1,232,973 - -0.2
1,232,975 + -0.1
1,232,976 - +0.7
1,232,984 + -1.2
1,232,984 + +0.8
1,232,984 + +0.5
1,232,999 - -0.7
1,233,001 + -0.3
1,233,002 + -1.2
1,233,002 - -2.0
1,233,002 - +0.4
1,233,002 - -1.9
1,233,003 + -0.8
1,233,003 + -0.9
1,233,003 + -0.0
1,233,003 + -1.2
1,233,004 - -1.6
1,233,052 + -0.1
1,233,107 + +0.3
1,233,114 - -1.1
1,233,114 - -1.1
1,233,134 + +0.6
1,233,135 - -1.6
1,233,135 - -1.1
1,233,205 - -1.9
1,233,229 - -1.4
1,233,229 - +0.3
1,233,333 + CA264_05320 0.14 +0.1
1,233,476 + CA264_05320 0.25 -1.4
1,233,525 + CA264_05320 0.29 -0.2
1,233,602 + CA264_05320 0.35 -0.4
1,233,602 + CA264_05320 0.35 +0.4
1,233,779 + CA264_05320 0.49 +0.6
1,233,831 + CA264_05320 0.53 -0.6
1,233,854 + CA264_05320 0.54 +0.2
1,233,854 + CA264_05320 0.54 -0.7
1,233,887 + CA264_05320 0.57 -1.2
1,233,887 + CA264_05320 0.57 -0.9
1,233,895 - CA264_05320 0.58 -1.1
1,233,933 - CA264_05320 0.61 -2.9
1,233,945 + CA264_05320 0.61 -0.8
1,234,130 + CA264_05320 0.76 +0.4
1,234,339 - +0.3
1,234,424 + -0.7
1,234,425 - -0.9
1,234,446 + +1.6
1,234,449 + +0.7
1,234,450 - -1.3
1,234,450 - -0.3
1,234,529 - -1.1
1,234,569 + +0.2
1,234,573 + -0.7
1,234,574 - -0.2
1,234,574 - -0.3
1,234,574 - -1.3
1,234,575 + -2.1
1,234,575 + -2.4
1,234,586 + +1.0
1,234,637 - CA264_05325 0.13 -1.0
1,234,637 - CA264_05325 0.13 -1.6
1,234,647 + CA264_05325 0.14 -0.2
1,234,648 - CA264_05325 0.14 -2.5
1,234,707 + CA264_05325 0.18 +0.0
1,234,708 - CA264_05325 0.18 -0.9
1,234,708 - CA264_05325 0.18 -0.7
1,234,708 - CA264_05325 0.18 -1.5
1,234,708 - CA264_05325 0.18 -0.8
1,234,711 - CA264_05325 0.18 -0.3
1,234,711 - CA264_05325 0.18 -0.5
1,234,711 - CA264_05325 0.18 +1.8
1,234,711 - CA264_05325 0.18 -1.5
1,234,745 + CA264_05325 0.20 -1.8
1,234,746 - CA264_05325 0.20 +1.5
1,234,910 + CA264_05325 0.31 +0.1
1,234,933 + CA264_05325 0.33 -1.3
1,234,966 + CA264_05325 0.35 -1.4
1,235,043 + CA264_05325 0.40 +0.2
1,235,044 - CA264_05325 0.40 -0.4
1,235,088 + CA264_05325 0.43 +0.5
1,235,103 + CA264_05325 0.44 +0.5
1,235,104 - CA264_05325 0.45 -0.1
1,235,130 + CA264_05325 0.46 -1.3
1,235,180 - CA264_05325 0.50 +0.9
1,235,198 + CA264_05325 0.51 -0.6
1,235,198 + CA264_05325 0.51 +0.6
1,235,198 + CA264_05325 0.51 +0.5
1,235,199 - CA264_05325 0.51 +1.3
1,235,199 - CA264_05325 0.51 +0.7
1,235,423 + CA264_05325 0.66 +0.1
1,235,424 - CA264_05325 0.66 -0.7
1,235,424 - CA264_05325 0.66 -0.8

Or see this region's nucleotide sequence