Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_05200 and CA264_05205 are separated by 119 nucleotides CA264_05205 and CA264_05210 are separated by 58 nucleotides CA264_05210 and CA264_05215 are separated by 58 nucleotides CA264_05215 and CA264_05220 are separated by 223 nucleotides CA264_05220 and CA264_05225 are separated by 135 nucleotides CA264_05225 and CA264_05230 are separated by 1 nucleotides
CA264_05200: CA264_05200 - GDP-mannose 4,6-dehydratase, at 1,207,408 to 1,208,520
_05200
CA264_05205: CA264_05205 - tRNA-Asp, at 1,208,640 to 1,208,713
_05205
CA264_05210: CA264_05210 - tRNA-Asp, at 1,208,772 to 1,208,845
_05210
CA264_05215: CA264_05215 - tRNA-Asp, at 1,208,904 to 1,208,977
_05215
CA264_05220: CA264_05220 - acetyl-CoA carboxylase carboxyl transferase subunit alpha, at 1,209,201 to 1,210,151
_05220
CA264_05225: CA264_05225 - MBL fold metallo-hydrolase, at 1,210,287 to 1,211,129
_05225
CA264_05230: CA264_05230 - hypothetical protein, at 1,211,131 to 1,211,901
_05230
Position (kb)
1209
1210
1211 Strain fitness (log2 ratio)
-1
0
1 at 1208.214 kb on - strand, within CA264_05200 at 1208.260 kb on + strand, within CA264_05200 at 1208.260 kb on + strand, within CA264_05200 at 1208.261 kb on - strand, within CA264_05200 at 1208.322 kb on - strand, within CA264_05200 at 1208.388 kb on + strand, within CA264_05200 at 1208.389 kb on - strand, within CA264_05200 at 1208.410 kb on + strand at 1208.477 kb on - strand at 1208.529 kb on + strand at 1208.534 kb on + strand at 1208.534 kb on + strand at 1208.535 kb on - strand at 1208.535 kb on - strand at 1208.535 kb on - strand at 1208.536 kb on + strand at 1208.536 kb on + strand at 1208.536 kb on + strand at 1208.537 kb on - strand at 1208.537 kb on - strand at 1208.540 kb on - strand at 1208.583 kb on - strand at 1208.583 kb on - strand at 1209.062 kb on + strand at 1209.071 kb on - strand at 1209.086 kb on - strand at 1209.089 kb on - strand at 1209.129 kb on + strand at 1210.124 kb on + strand at 1210.168 kb on - strand at 1210.181 kb on + strand at 1210.243 kb on - strand at 1210.248 kb on + strand at 1210.249 kb on - strand at 1210.249 kb on - strand at 1210.252 kb on + strand at 1210.254 kb on + strand at 1210.325 kb on - strand at 1210.349 kb on - strand at 1210.394 kb on + strand, within CA264_05225 at 1210.421 kb on + strand, within CA264_05225 at 1210.421 kb on + strand, within CA264_05225 at 1210.421 kb on + strand, within CA264_05225 at 1210.421 kb on + strand, within CA264_05225 at 1210.422 kb on - strand, within CA264_05225 at 1210.449 kb on - strand, within CA264_05225 at 1210.449 kb on - strand, within CA264_05225 at 1210.670 kb on + strand, within CA264_05225 at 1210.670 kb on + strand, within CA264_05225 at 1210.675 kb on - strand, within CA264_05225 at 1210.675 kb on - strand, within CA264_05225 at 1210.751 kb on + strand, within CA264_05225 at 1210.878 kb on + strand, within CA264_05225 at 1210.879 kb on - strand, within CA264_05225 at 1210.899 kb on + strand, within CA264_05225 at 1210.900 kb on - strand, within CA264_05225 at 1210.900 kb on - strand, within CA264_05225 at 1210.932 kb on - strand, within CA264_05225 at 1210.945 kb on - strand, within CA264_05225 at 1211.054 kb on - strand at 1211.054 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 1,208,214 - CA264_05200 0.72 -0.8 1,208,260 + CA264_05200 0.77 -1.2 1,208,260 + CA264_05200 0.77 +0.1 1,208,261 - CA264_05200 0.77 -1.2 1,208,322 - CA264_05200 0.82 +0.2 1,208,388 + CA264_05200 0.88 +0.1 1,208,389 - CA264_05200 0.88 -1.1 1,208,410 + +0.3 1,208,477 - +0.6 1,208,529 + -0.6 1,208,534 + +0.5 1,208,534 + -1.0 1,208,535 - -0.7 1,208,535 - -1.2 1,208,535 - -0.6 1,208,536 + -0.1 1,208,536 + +0.3 1,208,536 + -0.3 1,208,537 - +0.3 1,208,537 - +1.0 1,208,540 - +0.4 1,208,583 - -0.2 1,208,583 - +1.4 1,209,062 + -0.3 1,209,071 - -0.7 1,209,086 - -1.1 1,209,089 - +0.3 1,209,129 + -0.0 1,210,124 + -0.1 1,210,168 - -0.8 1,210,181 + +0.5 1,210,243 - +0.3 1,210,248 + -0.9 1,210,249 - +0.7 1,210,249 - +0.3 1,210,252 + +0.2 1,210,254 + +0.3 1,210,325 - +1.0 1,210,349 - -0.5 1,210,394 + CA264_05225 0.13 +0.3 1,210,421 + CA264_05225 0.16 -0.2 1,210,421 + CA264_05225 0.16 -0.2 1,210,421 + CA264_05225 0.16 +0.1 1,210,421 + CA264_05225 0.16 +0.0 1,210,422 - CA264_05225 0.16 +0.1 1,210,449 - CA264_05225 0.19 +0.3 1,210,449 - CA264_05225 0.19 -0.4 1,210,670 + CA264_05225 0.45 -0.2 1,210,670 + CA264_05225 0.45 -1.3 1,210,675 - CA264_05225 0.46 -0.4 1,210,675 - CA264_05225 0.46 +0.4 1,210,751 + CA264_05225 0.55 +1.1 1,210,878 + CA264_05225 0.70 -0.0 1,210,879 - CA264_05225 0.70 -1.4 1,210,899 + CA264_05225 0.73 +0.6 1,210,900 - CA264_05225 0.73 +0.2 1,210,900 - CA264_05225 0.73 -0.2 1,210,932 - CA264_05225 0.77 -0.9 1,210,945 - CA264_05225 0.78 +0.0 1,211,054 - -1.2 1,211,054 - +0.0
Or see this region's nucleotide sequence