Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_05195 and CA264_05200 are separated by 49 nucleotides CA264_05200 and CA264_05205 are separated by 119 nucleotides CA264_05205 and CA264_05210 are separated by 58 nucleotides CA264_05210 and CA264_05215 are separated by 58 nucleotides CA264_05215 and CA264_05220 are separated by 223 nucleotides
CA264_05195: CA264_05195 - GDP-fucose synthetase, at 1,206,423 to 1,207,358
_05195
CA264_05200: CA264_05200 - GDP-mannose 4,6-dehydratase, at 1,207,408 to 1,208,520
_05200
CA264_05205: CA264_05205 - tRNA-Asp, at 1,208,640 to 1,208,713
_05205
CA264_05210: CA264_05210 - tRNA-Asp, at 1,208,772 to 1,208,845
_05210
CA264_05215: CA264_05215 - tRNA-Asp, at 1,208,904 to 1,208,977
_05215
CA264_05220: CA264_05220 - acetyl-CoA carboxylase carboxyl transferase subunit alpha, at 1,209,201 to 1,210,151
_05220
Position (kb)
1207
1208
1209 Strain fitness (log2 ratio)
-2
-1
0
1 at 1206.418 kb on - strand at 1206.422 kb on + strand at 1206.423 kb on - strand at 1206.423 kb on - strand at 1206.597 kb on + strand, within CA264_05195 at 1206.598 kb on - strand, within CA264_05195 at 1206.695 kb on + strand, within CA264_05195 at 1206.792 kb on + strand, within CA264_05195 at 1206.792 kb on + strand, within CA264_05195 at 1206.831 kb on + strand, within CA264_05195 at 1206.832 kb on - strand, within CA264_05195 at 1206.857 kb on + strand, within CA264_05195 at 1206.858 kb on - strand, within CA264_05195 at 1206.858 kb on - strand, within CA264_05195 at 1206.930 kb on + strand, within CA264_05195 at 1206.943 kb on - strand, within CA264_05195 at 1207.028 kb on - strand, within CA264_05195 at 1207.290 kb on - strand at 1207.295 kb on - strand at 1207.323 kb on + strand at 1207.323 kb on + strand at 1207.345 kb on + strand at 1207.348 kb on + strand at 1207.348 kb on + strand at 1207.356 kb on + strand at 1207.356 kb on + strand at 1207.359 kb on + strand at 1207.360 kb on - strand at 1207.360 kb on - strand at 1207.360 kb on - strand at 1207.361 kb on + strand at 1207.361 kb on + strand at 1207.361 kb on + strand at 1207.362 kb on - strand at 1207.362 kb on - strand at 1207.364 kb on - strand at 1207.364 kb on - strand at 1207.364 kb on - strand at 1207.365 kb on + strand at 1207.375 kb on + strand at 1207.375 kb on + strand at 1207.379 kb on - strand at 1207.381 kb on - strand at 1207.391 kb on + strand at 1207.422 kb on + strand at 1207.422 kb on + strand at 1207.422 kb on + strand at 1207.423 kb on - strand at 1207.423 kb on - strand at 1207.424 kb on + strand at 1207.433 kb on + strand at 1207.453 kb on + strand at 1207.453 kb on + strand at 1207.454 kb on - strand at 1207.469 kb on + strand at 1207.515 kb on + strand at 1207.524 kb on + strand, within CA264_05200 at 1207.544 kb on + strand, within CA264_05200 at 1207.545 kb on - strand, within CA264_05200 at 1207.545 kb on - strand, within CA264_05200 at 1207.545 kb on - strand, within CA264_05200 at 1207.545 kb on - strand, within CA264_05200 at 1207.686 kb on - strand, within CA264_05200 at 1207.763 kb on + strand, within CA264_05200 at 1207.763 kb on + strand, within CA264_05200 at 1207.789 kb on + strand, within CA264_05200 at 1207.892 kb on - strand, within CA264_05200 at 1207.905 kb on + strand, within CA264_05200 at 1207.912 kb on - strand, within CA264_05200 at 1207.912 kb on - strand, within CA264_05200 at 1207.912 kb on - strand, within CA264_05200 at 1207.936 kb on + strand, within CA264_05200 at 1207.936 kb on + strand, within CA264_05200 at 1207.936 kb on + strand, within CA264_05200 at 1207.937 kb on - strand, within CA264_05200 at 1207.937 kb on - strand, within CA264_05200 at 1207.937 kb on - strand, within CA264_05200 at 1207.937 kb on - strand, within CA264_05200 at 1207.937 kb on - strand, within CA264_05200 at 1207.951 kb on - strand, within CA264_05200 at 1207.951 kb on - strand, within CA264_05200 at 1207.956 kb on - strand, within CA264_05200 at 1207.960 kb on - strand, within CA264_05200 at 1208.058 kb on - strand, within CA264_05200 at 1208.058 kb on - strand, within CA264_05200 at 1208.101 kb on + strand, within CA264_05200 at 1208.102 kb on - strand, within CA264_05200 at 1208.102 kb on - strand, within CA264_05200 at 1208.102 kb on - strand, within CA264_05200 at 1208.105 kb on + strand, within CA264_05200 at 1208.105 kb on + strand, within CA264_05200 at 1208.105 kb on + strand, within CA264_05200 at 1208.106 kb on - strand, within CA264_05200 at 1208.106 kb on - strand, within CA264_05200 at 1208.150 kb on - strand, within CA264_05200 at 1208.214 kb on - strand, within CA264_05200 at 1208.260 kb on + strand, within CA264_05200 at 1208.260 kb on + strand, within CA264_05200 at 1208.261 kb on - strand, within CA264_05200 at 1208.322 kb on - strand, within CA264_05200 at 1208.388 kb on + strand, within CA264_05200 at 1208.389 kb on - strand, within CA264_05200 at 1208.410 kb on + strand at 1208.477 kb on - strand at 1208.529 kb on + strand at 1208.534 kb on + strand at 1208.534 kb on + strand at 1208.535 kb on - strand at 1208.535 kb on - strand at 1208.535 kb on - strand at 1208.536 kb on + strand at 1208.536 kb on + strand at 1208.536 kb on + strand at 1208.537 kb on - strand at 1208.537 kb on - strand at 1208.540 kb on - strand at 1208.583 kb on - strand at 1208.583 kb on - strand at 1209.062 kb on + strand at 1209.071 kb on - strand at 1209.086 kb on - strand at 1209.089 kb on - strand at 1209.129 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 1,206,418 - -2.2 1,206,422 + +0.2 1,206,423 - -2.2 1,206,423 - -2.0 1,206,597 + CA264_05195 0.19 -0.0 1,206,598 - CA264_05195 0.19 -2.2 1,206,695 + CA264_05195 0.29 +1.0 1,206,792 + CA264_05195 0.39 +1.3 1,206,792 + CA264_05195 0.39 +1.5 1,206,831 + CA264_05195 0.44 +0.3 1,206,832 - CA264_05195 0.44 -1.2 1,206,857 + CA264_05195 0.46 +0.0 1,206,858 - CA264_05195 0.46 -1.0 1,206,858 - CA264_05195 0.46 -0.8 1,206,930 + CA264_05195 0.54 +0.2 1,206,943 - CA264_05195 0.56 -0.2 1,207,028 - CA264_05195 0.65 -0.4 1,207,290 - +1.1 1,207,295 - -0.6 1,207,323 + -0.9 1,207,323 + +0.6 1,207,345 + -1.1 1,207,348 + +0.8 1,207,348 + +0.1 1,207,356 + +0.4 1,207,356 + +1.4 1,207,359 + +1.0 1,207,360 - -1.1 1,207,360 - -0.1 1,207,360 - -1.0 1,207,361 + -0.1 1,207,361 + -0.5 1,207,361 + +0.1 1,207,362 - +0.2 1,207,362 - +0.3 1,207,364 - -0.0 1,207,364 - +0.3 1,207,364 - -0.7 1,207,365 + -1.1 1,207,375 + -0.2 1,207,375 + +0.3 1,207,379 - +0.5 1,207,381 - +0.7 1,207,391 + -0.2 1,207,422 + +0.7 1,207,422 + -0.8 1,207,422 + -0.0 1,207,423 - +0.1 1,207,423 - -0.8 1,207,424 + +0.5 1,207,433 + +0.3 1,207,453 + -1.4 1,207,453 + -1.5 1,207,454 - -0.3 1,207,469 + +1.3 1,207,515 + +0.0 1,207,524 + CA264_05200 0.10 -0.5 1,207,544 + CA264_05200 0.12 -0.7 1,207,545 - CA264_05200 0.12 -1.6 1,207,545 - CA264_05200 0.12 +1.1 1,207,545 - CA264_05200 0.12 -0.5 1,207,545 - CA264_05200 0.12 -0.1 1,207,686 - CA264_05200 0.25 +0.3 1,207,763 + CA264_05200 0.32 -0.7 1,207,763 + CA264_05200 0.32 +0.2 1,207,789 + CA264_05200 0.34 +0.9 1,207,892 - CA264_05200 0.43 +0.6 1,207,905 + CA264_05200 0.45 -0.2 1,207,912 - CA264_05200 0.45 -0.2 1,207,912 - CA264_05200 0.45 +0.9 1,207,912 - CA264_05200 0.45 -0.5 1,207,936 + CA264_05200 0.47 -0.6 1,207,936 + CA264_05200 0.47 -0.1 1,207,936 + CA264_05200 0.47 +0.2 1,207,937 - CA264_05200 0.48 -0.5 1,207,937 - CA264_05200 0.48 -0.1 1,207,937 - CA264_05200 0.48 +0.3 1,207,937 - CA264_05200 0.48 -0.6 1,207,937 - CA264_05200 0.48 -0.8 1,207,951 - CA264_05200 0.49 +0.1 1,207,951 - CA264_05200 0.49 +0.0 1,207,956 - CA264_05200 0.49 +0.1 1,207,960 - CA264_05200 0.50 -0.5 1,208,058 - CA264_05200 0.58 -1.3 1,208,058 - CA264_05200 0.58 -0.2 1,208,101 + CA264_05200 0.62 +1.3 1,208,102 - CA264_05200 0.62 +0.1 1,208,102 - CA264_05200 0.62 +0.0 1,208,102 - CA264_05200 0.62 -1.1 1,208,105 + CA264_05200 0.63 -0.1 1,208,105 + CA264_05200 0.63 -0.1 1,208,105 + CA264_05200 0.63 +0.1 1,208,106 - CA264_05200 0.63 -0.1 1,208,106 - CA264_05200 0.63 -0.2 1,208,150 - CA264_05200 0.67 +0.2 1,208,214 - CA264_05200 0.72 -0.8 1,208,260 + CA264_05200 0.77 -1.2 1,208,260 + CA264_05200 0.77 +0.1 1,208,261 - CA264_05200 0.77 -1.2 1,208,322 - CA264_05200 0.82 +0.2 1,208,388 + CA264_05200 0.88 +0.1 1,208,389 - CA264_05200 0.88 -1.1 1,208,410 + +0.3 1,208,477 - +0.6 1,208,529 + -0.6 1,208,534 + +0.5 1,208,534 + -1.0 1,208,535 - -0.7 1,208,535 - -1.2 1,208,535 - -0.6 1,208,536 + -0.1 1,208,536 + +0.3 1,208,536 + -0.3 1,208,537 - +0.3 1,208,537 - +1.0 1,208,540 - +0.4 1,208,583 - -0.2 1,208,583 - +1.4 1,209,062 + -0.3 1,209,071 - -0.7 1,209,086 - -1.1 1,209,089 - +0.3 1,209,129 + -0.0
Or see this region's nucleotide sequence