Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04665 and CA264_04670 are separated by 123 nucleotides CA264_04670 and CA264_04675 are separated by 0 nucleotides CA264_04675 and CA264_04680 are separated by 184 nucleotides
CA264_04665: CA264_04665 - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD, at 1,081,153 to 1,082,160
_04665
CA264_04670: CA264_04670 - hypothetical protein, at 1,082,284 to 1,082,670
_04670
CA264_04675: CA264_04675 - SsrA-binding protein, at 1,082,671 to 1,083,138
_04675
CA264_04680: CA264_04680 - hypothetical protein, at 1,083,323 to 1,084,081
_04680
Position (kb)
1082
1083
1084 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1082.151 kb on - strand at 1082.162 kb on - strand at 1082.162 kb on - strand at 1082.288 kb on + strand at 1082.312 kb on - strand at 1082.315 kb on + strand at 1082.316 kb on - strand at 1082.436 kb on - strand, within CA264_04670 at 1082.520 kb on + strand, within CA264_04670 at 1082.523 kb on - strand, within CA264_04670 at 1082.562 kb on + strand, within CA264_04670 at 1082.562 kb on + strand, within CA264_04670 at 1082.563 kb on - strand, within CA264_04670 at 1082.667 kb on - strand at 1082.668 kb on + strand at 1082.669 kb on - strand at 1082.706 kb on - strand at 1083.136 kb on + strand at 1083.142 kb on + strand at 1083.142 kb on + strand at 1083.143 kb on - strand at 1083.176 kb on + strand at 1083.201 kb on - strand at 1083.224 kb on + strand at 1083.225 kb on - strand at 1083.251 kb on + strand at 1083.259 kb on + strand at 1083.260 kb on - strand at 1083.261 kb on + strand at 1083.261 kb on + strand at 1083.262 kb on - strand at 1083.318 kb on + strand at 1083.318 kb on + strand at 1083.322 kb on + strand at 1083.322 kb on + strand at 1083.322 kb on + strand at 1083.323 kb on - strand at 1083.375 kb on + strand at 1083.424 kb on + strand, within CA264_04680 at 1083.487 kb on + strand, within CA264_04680 at 1083.487 kb on + strand, within CA264_04680 at 1083.487 kb on + strand, within CA264_04680 at 1083.488 kb on - strand, within CA264_04680 at 1083.488 kb on - strand, within CA264_04680 at 1083.506 kb on + strand, within CA264_04680 at 1083.507 kb on - strand, within CA264_04680 at 1083.510 kb on - strand, within CA264_04680 at 1083.565 kb on + strand, within CA264_04680 at 1083.605 kb on + strand, within CA264_04680 at 1083.606 kb on - strand, within CA264_04680 at 1083.633 kb on + strand, within CA264_04680 at 1083.640 kb on - strand, within CA264_04680 at 1083.680 kb on - strand, within CA264_04680 at 1083.839 kb on + strand, within CA264_04680 at 1083.933 kb on + strand, within CA264_04680 at 1083.933 kb on + strand, within CA264_04680 at 1083.933 kb on + strand, within CA264_04680 at 1083.933 kb on + strand, within CA264_04680 at 1083.933 kb on + strand, within CA264_04680 at 1083.933 kb on + strand, within CA264_04680 at 1083.933 kb on + strand, within CA264_04680 at 1083.933 kb on + strand, within CA264_04680 at 1083.934 kb on - strand, within CA264_04680 at 1083.934 kb on - strand, within CA264_04680 at 1083.934 kb on - strand, within CA264_04680 at 1083.934 kb on - strand, within CA264_04680 at 1083.934 kb on - strand, within CA264_04680 at 1083.934 kb on - strand, within CA264_04680 at 1083.934 kb on - strand, within CA264_04680 at 1083.934 kb on - strand, within CA264_04680 at 1083.934 kb on - strand, within CA264_04680 at 1083.934 kb on - strand, within CA264_04680 at 1083.934 kb on - strand, within CA264_04680 at 1083.998 kb on - strand, within CA264_04680 at 1084.020 kb on - strand at 1084.105 kb on - strand at 1084.111 kb on + strand at 1084.113 kb on + strand at 1084.113 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 1,082,151 - +1.4 1,082,162 - -0.0 1,082,162 - -3.2 1,082,288 + -0.4 1,082,312 - -0.1 1,082,315 + -0.3 1,082,316 - -0.5 1,082,436 - CA264_04670 0.39 -0.1 1,082,520 + CA264_04670 0.61 +0.7 1,082,523 - CA264_04670 0.62 -0.0 1,082,562 + CA264_04670 0.72 -0.1 1,082,562 + CA264_04670 0.72 +0.1 1,082,563 - CA264_04670 0.72 +0.4 1,082,667 - +0.1 1,082,668 + -0.3 1,082,669 - +0.0 1,082,706 - -0.3 1,083,136 + -0.3 1,083,142 + -0.6 1,083,142 + -0.6 1,083,143 - +1.6 1,083,176 + +0.9 1,083,201 - -0.2 1,083,224 + -0.5 1,083,225 - -0.2 1,083,251 + -0.5 1,083,259 + +0.6 1,083,260 - -2.2 1,083,261 + -0.5 1,083,261 + +0.0 1,083,262 - -0.4 1,083,318 + -0.9 1,083,318 + -0.4 1,083,322 + -0.1 1,083,322 + +2.0 1,083,322 + +1.1 1,083,323 - -2.1 1,083,375 + -0.3 1,083,424 + CA264_04680 0.13 +0.5 1,083,487 + CA264_04680 0.22 -0.4 1,083,487 + CA264_04680 0.22 +0.3 1,083,487 + CA264_04680 0.22 -1.4 1,083,488 - CA264_04680 0.22 -0.6 1,083,488 - CA264_04680 0.22 -0.6 1,083,506 + CA264_04680 0.24 -0.0 1,083,507 - CA264_04680 0.24 +0.5 1,083,510 - CA264_04680 0.25 -1.0 1,083,565 + CA264_04680 0.32 -1.6 1,083,605 + CA264_04680 0.37 +0.9 1,083,606 - CA264_04680 0.37 +0.3 1,083,633 + CA264_04680 0.41 +0.1 1,083,640 - CA264_04680 0.42 -0.5 1,083,680 - CA264_04680 0.47 -0.7 1,083,839 + CA264_04680 0.68 -1.4 1,083,933 + CA264_04680 0.80 +0.2 1,083,933 + CA264_04680 0.80 +0.0 1,083,933 + CA264_04680 0.80 -0.0 1,083,933 + CA264_04680 0.80 -0.6 1,083,933 + CA264_04680 0.80 +0.2 1,083,933 + CA264_04680 0.80 +0.9 1,083,933 + CA264_04680 0.80 -1.2 1,083,933 + CA264_04680 0.80 -0.6 1,083,934 - CA264_04680 0.81 -1.4 1,083,934 - CA264_04680 0.81 -0.4 1,083,934 - CA264_04680 0.81 -1.1 1,083,934 - CA264_04680 0.81 -0.9 1,083,934 - CA264_04680 0.81 -0.3 1,083,934 - CA264_04680 0.81 -0.3 1,083,934 - CA264_04680 0.81 -1.8 1,083,934 - CA264_04680 0.81 -1.0 1,083,934 - CA264_04680 0.81 -0.7 1,083,934 - CA264_04680 0.81 -0.1 1,083,934 - CA264_04680 0.81 -0.1 1,083,998 - CA264_04680 0.89 +1.2 1,084,020 - +1.3 1,084,105 - +0.0 1,084,111 + -0.2 1,084,113 + +0.2 1,084,113 + -0.7
Or see this region's nucleotide sequence