Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04485 and CA264_04490 are separated by 133 nucleotides CA264_04490 and CA264_04495 overlap by 4 nucleotides
CA264_04485: CA264_04485 - 4-hydroxy-tetrahydrodipicolinate synthase, at 1,035,934 to 1,036,803
_04485
CA264_04490: CA264_04490 - DNA-binding response regulator, at 1,036,937 to 1,037,674
_04490
CA264_04495: CA264_04495 - histidine kinase, at 1,037,671 to 1,038,669
_04495
Position (kb)
1036
1037
1038 Strain fitness (log2 ratio)
-2
-1
0
1 at 1036.815 kb on - strand at 1036.821 kb on + strand at 1036.828 kb on + strand at 1036.835 kb on + strand at 1036.835 kb on + strand at 1036.836 kb on - strand at 1036.839 kb on + strand at 1036.840 kb on - strand at 1036.943 kb on + strand at 1036.944 kb on - strand at 1037.036 kb on + strand, within CA264_04490 at 1037.036 kb on + strand, within CA264_04490 at 1037.037 kb on - strand, within CA264_04490 at 1037.045 kb on + strand, within CA264_04490 at 1037.170 kb on + strand, within CA264_04490 at 1037.170 kb on + strand, within CA264_04490 at 1037.172 kb on + strand, within CA264_04490 at 1037.172 kb on + strand, within CA264_04490 at 1037.172 kb on + strand, within CA264_04490 at 1037.173 kb on - strand, within CA264_04490 at 1037.173 kb on - strand, within CA264_04490 at 1037.173 kb on - strand, within CA264_04490 at 1037.173 kb on - strand, within CA264_04490 at 1037.181 kb on - strand, within CA264_04490 at 1037.214 kb on - strand, within CA264_04490 at 1037.248 kb on + strand, within CA264_04490 at 1037.249 kb on - strand, within CA264_04490 at 1037.377 kb on + strand, within CA264_04490 at 1037.385 kb on + strand, within CA264_04490 at 1037.386 kb on - strand, within CA264_04490 at 1037.422 kb on - strand, within CA264_04490 at 1037.529 kb on - strand, within CA264_04490 at 1037.529 kb on - strand, within CA264_04490 at 1037.610 kb on - strand at 1037.613 kb on + strand at 1037.613 kb on + strand at 1037.614 kb on - strand at 1037.614 kb on - strand at 1037.614 kb on - strand at 1037.614 kb on - strand at 1037.624 kb on - strand at 1037.674 kb on + strand at 1037.675 kb on - strand at 1037.704 kb on + strand at 1037.720 kb on + strand at 1037.849 kb on - strand, within CA264_04495 at 1037.893 kb on + strand, within CA264_04495 at 1037.898 kb on + strand, within CA264_04495 at 1037.898 kb on + strand, within CA264_04495 at 1037.898 kb on + strand, within CA264_04495 at 1037.899 kb on - strand, within CA264_04495 at 1037.998 kb on + strand, within CA264_04495 at 1038.009 kb on + strand, within CA264_04495 at 1038.009 kb on + strand, within CA264_04495 at 1038.057 kb on + strand, within CA264_04495 at 1038.058 kb on - strand, within CA264_04495 at 1038.064 kb on - strand, within CA264_04495 at 1038.111 kb on - strand, within CA264_04495 at 1038.119 kb on + strand, within CA264_04495 at 1038.120 kb on - strand, within CA264_04495 at 1038.176 kb on + strand, within CA264_04495 at 1038.188 kb on + strand, within CA264_04495 at 1038.226 kb on + strand, within CA264_04495 at 1038.306 kb on - strand, within CA264_04495 at 1038.306 kb on - strand, within CA264_04495 at 1038.383 kb on + strand, within CA264_04495 at 1038.384 kb on - strand, within CA264_04495 at 1038.389 kb on + strand, within CA264_04495 at 1038.390 kb on - strand, within CA264_04495 at 1038.390 kb on - strand, within CA264_04495 at 1038.411 kb on + strand, within CA264_04495 at 1038.412 kb on - strand, within CA264_04495 at 1038.412 kb on - strand, within CA264_04495 at 1038.412 kb on - strand, within CA264_04495 at 1038.413 kb on + strand, within CA264_04495 at 1038.414 kb on - strand, within CA264_04495 at 1038.492 kb on - strand, within CA264_04495 at 1038.532 kb on + strand, within CA264_04495 at 1038.543 kb on + strand, within CA264_04495
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 1,036,815 - +0.7 1,036,821 + +0.6 1,036,828 + +0.5 1,036,835 + +0.1 1,036,835 + +0.1 1,036,836 - +0.6 1,036,839 + -0.5 1,036,840 - -0.8 1,036,943 + +0.7 1,036,944 - +0.5 1,037,036 + CA264_04490 0.13 -1.1 1,037,036 + CA264_04490 0.13 -1.1 1,037,037 - CA264_04490 0.14 -1.6 1,037,045 + CA264_04490 0.15 -0.5 1,037,170 + CA264_04490 0.32 +0.9 1,037,170 + CA264_04490 0.32 +0.1 1,037,172 + CA264_04490 0.32 +1.1 1,037,172 + CA264_04490 0.32 +0.2 1,037,172 + CA264_04490 0.32 +0.3 1,037,173 - CA264_04490 0.32 -0.2 1,037,173 - CA264_04490 0.32 -0.9 1,037,173 - CA264_04490 0.32 +0.1 1,037,173 - CA264_04490 0.32 -0.3 1,037,181 - CA264_04490 0.33 -0.7 1,037,214 - CA264_04490 0.38 +0.4 1,037,248 + CA264_04490 0.42 +0.1 1,037,249 - CA264_04490 0.42 -2.1 1,037,377 + CA264_04490 0.60 +0.2 1,037,385 + CA264_04490 0.61 +0.2 1,037,386 - CA264_04490 0.61 -1.5 1,037,422 - CA264_04490 0.66 -0.5 1,037,529 - CA264_04490 0.80 -0.2 1,037,529 - CA264_04490 0.80 -0.4 1,037,610 - -0.2 1,037,613 + -0.4 1,037,613 + +0.1 1,037,614 - +0.4 1,037,614 - +1.7 1,037,614 - +0.2 1,037,614 - +0.0 1,037,624 - +0.2 1,037,674 + -0.5 1,037,675 - +0.5 1,037,704 + -1.4 1,037,720 + -1.8 1,037,849 - CA264_04495 0.18 -2.2 1,037,893 + CA264_04495 0.22 -1.4 1,037,898 + CA264_04495 0.23 -2.1 1,037,898 + CA264_04495 0.23 +1.2 1,037,898 + CA264_04495 0.23 -0.7 1,037,899 - CA264_04495 0.23 +0.2 1,037,998 + CA264_04495 0.33 -0.2 1,038,009 + CA264_04495 0.34 -2.6 1,038,009 + CA264_04495 0.34 -1.6 1,038,057 + CA264_04495 0.39 -1.2 1,038,058 - CA264_04495 0.39 -0.5 1,038,064 - CA264_04495 0.39 -1.6 1,038,111 - CA264_04495 0.44 -2.0 1,038,119 + CA264_04495 0.45 -1.5 1,038,120 - CA264_04495 0.45 +0.3 1,038,176 + CA264_04495 0.51 -1.7 1,038,188 + CA264_04495 0.52 -0.7 1,038,226 + CA264_04495 0.56 -0.6 1,038,306 - CA264_04495 0.64 -1.9 1,038,306 - CA264_04495 0.64 -1.2 1,038,383 + CA264_04495 0.71 +0.3 1,038,384 - CA264_04495 0.71 -1.1 1,038,389 + CA264_04495 0.72 -0.1 1,038,390 - CA264_04495 0.72 -0.8 1,038,390 - CA264_04495 0.72 -0.8 1,038,411 + CA264_04495 0.74 -0.1 1,038,412 - CA264_04495 0.74 -1.1 1,038,412 - CA264_04495 0.74 +0.5 1,038,412 - CA264_04495 0.74 -0.5 1,038,413 + CA264_04495 0.74 -0.1 1,038,414 - CA264_04495 0.74 -0.9 1,038,492 - CA264_04495 0.82 +0.0 1,038,532 + CA264_04495 0.86 -0.1 1,038,543 + CA264_04495 0.87 +0.0
Or see this region's nucleotide sequence