Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01625 and CA264_01630 are separated by 368 nucleotides CA264_01630 and CA264_01635 are separated by 335 nucleotides
CA264_01625: CA264_01625 - hypothetical protein, at 381,121 to 381,732
_01625
CA264_01630: CA264_01630 - TonB dependent receptor, at 382,101 to 384,557
_01630
CA264_01635: CA264_01635 - nicotinamidase, at 384,893 to 385,504
_01635
Position (kb) 382
383
384
385 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 381.124 kb on + strand at 381.145 kb on - strand at 381.212 kb on + strand, within CA264_01625 at 381.212 kb on + strand, within CA264_01625 at 381.217 kb on + strand, within CA264_01625 at 381.218 kb on - strand, within CA264_01625 at 381.287 kb on - strand, within CA264_01625 at 381.357 kb on - strand, within CA264_01625 at 381.357 kb on - strand, within CA264_01625 at 381.378 kb on - strand, within CA264_01625 at 381.434 kb on + strand, within CA264_01625 at 381.434 kb on + strand, within CA264_01625 at 381.434 kb on + strand, within CA264_01625 at 381.434 kb on + strand, within CA264_01625 at 381.435 kb on - strand, within CA264_01625 at 381.435 kb on - strand, within CA264_01625 at 381.438 kb on + strand, within CA264_01625 at 381.439 kb on - strand, within CA264_01625 at 381.440 kb on + strand, within CA264_01625 at 381.440 kb on + strand, within CA264_01625 at 381.440 kb on + strand, within CA264_01625 at 381.440 kb on + strand, within CA264_01625 at 381.441 kb on - strand, within CA264_01625 at 381.441 kb on - strand, within CA264_01625 at 381.441 kb on - strand, within CA264_01625 at 381.441 kb on - strand, within CA264_01625 at 381.461 kb on + strand, within CA264_01625 at 381.462 kb on - strand, within CA264_01625 at 381.462 kb on - strand, within CA264_01625 at 381.524 kb on - strand, within CA264_01625 at 381.616 kb on + strand, within CA264_01625 at 381.616 kb on + strand, within CA264_01625 at 381.617 kb on - strand, within CA264_01625 at 381.739 kb on + strand at 381.739 kb on + strand at 381.739 kb on + strand at 381.740 kb on - strand at 381.740 kb on - strand at 381.749 kb on + strand at 381.754 kb on + strand at 381.755 kb on - strand at 381.767 kb on - strand at 381.790 kb on - strand at 381.814 kb on + strand at 381.935 kb on + strand at 381.935 kb on + strand at 381.935 kb on + strand at 381.936 kb on - strand at 381.936 kb on - strand at 381.963 kb on - strand at 381.965 kb on + strand at 381.965 kb on + strand at 382.017 kb on + strand at 382.017 kb on + strand at 382.020 kb on + strand at 382.021 kb on - strand at 382.041 kb on + strand at 382.041 kb on + strand at 382.042 kb on - strand at 382.044 kb on - strand at 382.075 kb on + strand at 382.083 kb on + strand at 382.096 kb on - strand at 382.175 kb on + strand at 382.204 kb on + strand at 382.204 kb on + strand at 382.204 kb on + strand at 382.285 kb on + strand at 382.286 kb on - strand at 382.286 kb on - strand at 382.295 kb on + strand at 382.296 kb on - strand at 382.297 kb on + strand at 382.297 kb on + strand at 382.298 kb on - strand at 382.426 kb on + strand, within CA264_01630 at 382.441 kb on - strand, within CA264_01630 at 382.486 kb on + strand, within CA264_01630 at 382.487 kb on - strand, within CA264_01630 at 382.487 kb on - strand, within CA264_01630 at 382.490 kb on + strand, within CA264_01630 at 382.491 kb on - strand, within CA264_01630 at 382.492 kb on + strand, within CA264_01630 at 382.492 kb on + strand, within CA264_01630 at 382.493 kb on - strand, within CA264_01630 at 382.542 kb on + strand, within CA264_01630 at 382.543 kb on - strand, within CA264_01630 at 382.543 kb on - strand, within CA264_01630 at 382.543 kb on - strand, within CA264_01630 at 382.757 kb on + strand, within CA264_01630 at 382.820 kb on - strand, within CA264_01630 at 382.849 kb on - strand, within CA264_01630 at 382.852 kb on + strand, within CA264_01630 at 382.853 kb on - strand, within CA264_01630 at 382.865 kb on - strand, within CA264_01630 at 382.897 kb on + strand, within CA264_01630 at 382.920 kb on - strand, within CA264_01630 at 383.059 kb on + strand, within CA264_01630 at 383.078 kb on + strand, within CA264_01630 at 383.078 kb on + strand, within CA264_01630 at 383.078 kb on + strand, within CA264_01630 at 383.079 kb on - strand, within CA264_01630 at 383.161 kb on + strand, within CA264_01630 at 383.161 kb on + strand, within CA264_01630 at 383.161 kb on + strand, within CA264_01630 at 383.162 kb on - strand, within CA264_01630 at 383.171 kb on - strand, within CA264_01630 at 383.171 kb on - strand, within CA264_01630 at 383.171 kb on - strand, within CA264_01630 at 383.173 kb on + strand, within CA264_01630 at 383.177 kb on - strand, within CA264_01630 at 383.215 kb on - strand, within CA264_01630 at 383.244 kb on + strand, within CA264_01630 at 383.244 kb on + strand, within CA264_01630 at 383.244 kb on + strand, within CA264_01630 at 383.244 kb on + strand, within CA264_01630 at 383.248 kb on + strand, within CA264_01630 at 383.249 kb on - strand, within CA264_01630 at 383.317 kb on + strand, within CA264_01630 at 383.322 kb on - strand, within CA264_01630 at 383.334 kb on - strand, within CA264_01630 at 383.414 kb on + strand, within CA264_01630 at 383.447 kb on - strand, within CA264_01630 at 383.447 kb on - strand, within CA264_01630 at 383.711 kb on + strand, within CA264_01630 at 383.711 kb on + strand, within CA264_01630 at 383.711 kb on + strand, within CA264_01630 at 383.712 kb on - strand, within CA264_01630 at 383.714 kb on - strand, within CA264_01630 at 383.714 kb on - strand, within CA264_01630 at 383.781 kb on + strand, within CA264_01630 at 383.827 kb on + strand, within CA264_01630 at 383.827 kb on + strand, within CA264_01630 at 383.828 kb on - strand, within CA264_01630 at 383.871 kb on + strand, within CA264_01630 at 383.872 kb on - strand, within CA264_01630 at 383.872 kb on - strand, within CA264_01630 at 383.872 kb on - strand, within CA264_01630 at 383.880 kb on - strand, within CA264_01630 at 383.905 kb on + strand, within CA264_01630 at 383.942 kb on + strand, within CA264_01630 at 384.022 kb on - strand, within CA264_01630 at 384.026 kb on + strand, within CA264_01630 at 384.026 kb on + strand, within CA264_01630 at 384.026 kb on + strand, within CA264_01630 at 384.027 kb on - strand, within CA264_01630 at 384.145 kb on + strand, within CA264_01630 at 384.234 kb on + strand, within CA264_01630 at 384.234 kb on + strand, within CA264_01630 at 384.234 kb on + strand, within CA264_01630 at 384.235 kb on - strand, within CA264_01630 at 384.235 kb on - strand, within CA264_01630 at 384.235 kb on - strand, within CA264_01630 at 384.235 kb on - strand, within CA264_01630 at 384.235 kb on - strand, within CA264_01630 at 384.235 kb on - strand, within CA264_01630 at 384.301 kb on + strand, within CA264_01630 at 384.302 kb on - strand, within CA264_01630 at 384.310 kb on + strand, within CA264_01630 at 384.311 kb on - strand, within CA264_01630 at 384.314 kb on + strand at 384.327 kb on - strand at 384.328 kb on + strand at 384.329 kb on - strand at 384.356 kb on + strand at 384.357 kb on - strand at 384.420 kb on + strand at 384.421 kb on - strand at 384.433 kb on + strand at 384.434 kb on - strand at 384.434 kb on - strand at 384.434 kb on - strand at 384.520 kb on - strand at 384.561 kb on + strand at 384.561 kb on + strand at 384.562 kb on - strand at 384.562 kb on - strand at 384.562 kb on - strand at 384.563 kb on + strand at 384.563 kb on + strand at 384.563 kb on + strand at 384.563 kb on + strand at 384.564 kb on - strand at 384.631 kb on - strand at 384.645 kb on - strand at 384.696 kb on - strand at 384.714 kb on + strand at 384.714 kb on + strand at 384.784 kb on + strand at 384.796 kb on + strand at 384.815 kb on - strand at 384.872 kb on - strand at 384.872 kb on - strand at 384.873 kb on + strand at 384.873 kb on + strand at 384.874 kb on - strand at 384.907 kb on + strand at 384.942 kb on - strand at 385.000 kb on + strand, within CA264_01635 at 385.000 kb on + strand, within CA264_01635 at 385.000 kb on + strand, within CA264_01635 at 385.006 kb on - strand, within CA264_01635 at 385.006 kb on - strand, within CA264_01635 at 385.056 kb on + strand, within CA264_01635 at 385.099 kb on + strand, within CA264_01635 at 385.100 kb on - strand, within CA264_01635 at 385.161 kb on + strand, within CA264_01635 at 385.161 kb on + strand, within CA264_01635 at 385.162 kb on - strand, within CA264_01635 at 385.170 kb on - strand, within CA264_01635 at 385.301 kb on + strand, within CA264_01635 at 385.302 kb on - strand, within CA264_01635 at 385.478 kb on + strand at 385.479 kb on - strand at 385.479 kb on - strand at 385.479 kb on - strand at 385.479 kb on - strand at 385.479 kb on - strand at 385.479 kb on - strand at 385.484 kb on + strand at 385.487 kb on + strand at 385.493 kb on + strand at 385.504 kb on + strand at 385.504 kb on + strand at 385.504 kb on + strand at 385.504 kb on + strand at 385.505 kb on - strand at 385.505 kb on - strand at 385.505 kb on - strand at 385.508 kb on - strand at 385.508 kb on - strand at 385.514 kb on + strand at 385.517 kb on + strand at 385.517 kb on + strand at 385.518 kb on - strand at 385.518 kb on - strand at 385.518 kb on - strand at 385.524 kb on - strand at 385.543 kb on + strand at 385.543 kb on + strand at 385.543 kb on + strand at 385.545 kb on + strand at 385.545 kb on + strand at 385.546 kb on - strand at 385.546 kb on - strand at 385.546 kb on - strand at 385.546 kb on - strand at 385.546 kb on - strand at 385.547 kb on + strand at 385.548 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 381,124 + -0.4 381,145 - -0.3 381,212 + CA264_01625 0.15 -0.7 381,212 + CA264_01625 0.15 +1.1 381,217 + CA264_01625 0.16 +1.1 381,218 - CA264_01625 0.16 +0.3 381,287 - CA264_01625 0.27 +0.2 381,357 - CA264_01625 0.39 -0.3 381,357 - CA264_01625 0.39 +0.4 381,378 - CA264_01625 0.42 +0.8 381,434 + CA264_01625 0.51 -0.5 381,434 + CA264_01625 0.51 -0.2 381,434 + CA264_01625 0.51 -1.1 381,434 + CA264_01625 0.51 +1.1 381,435 - CA264_01625 0.51 +1.2 381,435 - CA264_01625 0.51 +0.6 381,438 + CA264_01625 0.52 -0.3 381,439 - CA264_01625 0.52 -0.9 381,440 + CA264_01625 0.52 -0.1 381,440 + CA264_01625 0.52 -0.0 381,440 + CA264_01625 0.52 +0.7 381,440 + CA264_01625 0.52 -0.5 381,441 - CA264_01625 0.52 +0.6 381,441 - CA264_01625 0.52 +0.3 381,441 - CA264_01625 0.52 +1.7 381,441 - CA264_01625 0.52 -0.2 381,461 + CA264_01625 0.56 -0.3 381,462 - CA264_01625 0.56 -0.9 381,462 - CA264_01625 0.56 -0.4 381,524 - CA264_01625 0.66 +0.5 381,616 + CA264_01625 0.81 -0.4 381,616 + CA264_01625 0.81 +0.1 381,617 - CA264_01625 0.81 +0.3 381,739 + -0.5 381,739 + -1.5 381,739 + -1.0 381,740 - +0.9 381,740 - -0.7 381,749 + -0.8 381,754 + -0.3 381,755 - -0.3 381,767 - +1.1 381,790 - -0.5 381,814 + -0.1 381,935 + +0.6 381,935 + +0.4 381,935 + -0.2 381,936 - +2.0 381,936 - -0.7 381,963 - -0.7 381,965 + -1.7 381,965 + +0.2 382,017 + -1.1 382,017 + -0.7 382,020 + -0.8 382,021 - +1.5 382,041 + +1.3 382,041 + -0.7 382,042 - +0.0 382,044 - +0.1 382,075 + -0.7 382,083 + +0.1 382,096 - -0.3 382,175 + +1.1 382,204 + -0.1 382,204 + -0.0 382,204 + -0.5 382,285 + -1.3 382,286 - -0.1 382,286 - +0.3 382,295 + +0.8 382,296 - +0.0 382,297 + +2.4 382,297 + -0.3 382,298 - -0.3 382,426 + CA264_01630 0.13 -0.5 382,441 - CA264_01630 0.14 -0.2 382,486 + CA264_01630 0.16 -0.4 382,487 - CA264_01630 0.16 +1.2 382,487 - CA264_01630 0.16 -0.6 382,490 + CA264_01630 0.16 -0.8 382,491 - CA264_01630 0.16 -0.6 382,492 + CA264_01630 0.16 -0.8 382,492 + CA264_01630 0.16 -0.4 382,493 - CA264_01630 0.16 +0.9 382,542 + CA264_01630 0.18 +0.2 382,543 - CA264_01630 0.18 -0.9 382,543 - CA264_01630 0.18 +0.5 382,543 - CA264_01630 0.18 +0.6 382,757 + CA264_01630 0.27 +0.4 382,820 - CA264_01630 0.29 -0.4 382,849 - CA264_01630 0.30 +0.1 382,852 + CA264_01630 0.31 -1.0 382,853 - CA264_01630 0.31 +0.2 382,865 - CA264_01630 0.31 -0.4 382,897 + CA264_01630 0.32 +0.3 382,920 - CA264_01630 0.33 +0.3 383,059 + CA264_01630 0.39 +0.9 383,078 + CA264_01630 0.40 -0.7 383,078 + CA264_01630 0.40 -0.4 383,078 + CA264_01630 0.40 +0.8 383,079 - CA264_01630 0.40 -0.2 383,161 + CA264_01630 0.43 +0.4 383,161 + CA264_01630 0.43 +0.5 383,161 + CA264_01630 0.43 +0.1 383,162 - CA264_01630 0.43 +1.1 383,171 - CA264_01630 0.44 -0.5 383,171 - CA264_01630 0.44 -0.1 383,171 - CA264_01630 0.44 -0.3 383,173 + CA264_01630 0.44 -0.2 383,177 - CA264_01630 0.44 -0.7 383,215 - CA264_01630 0.45 -0.3 383,244 + CA264_01630 0.47 -0.2 383,244 + CA264_01630 0.47 -2.2 383,244 + CA264_01630 0.47 -0.2 383,244 + CA264_01630 0.47 +0.2 383,248 + CA264_01630 0.47 -1.2 383,249 - CA264_01630 0.47 -0.2 383,317 + CA264_01630 0.49 +2.1 383,322 - CA264_01630 0.50 -0.9 383,334 - CA264_01630 0.50 -0.2 383,414 + CA264_01630 0.53 -0.3 383,447 - CA264_01630 0.55 -0.1 383,447 - CA264_01630 0.55 +1.9 383,711 + CA264_01630 0.66 -0.4 383,711 + CA264_01630 0.66 -0.6 383,711 + CA264_01630 0.66 -0.4 383,712 - CA264_01630 0.66 +0.6 383,714 - CA264_01630 0.66 +0.6 383,714 - CA264_01630 0.66 +0.8 383,781 + CA264_01630 0.68 -0.6 383,827 + CA264_01630 0.70 +0.3 383,827 + CA264_01630 0.70 -0.9 383,828 - CA264_01630 0.70 +0.5 383,871 + CA264_01630 0.72 -0.8 383,872 - CA264_01630 0.72 +0.2 383,872 - CA264_01630 0.72 -0.8 383,872 - CA264_01630 0.72 -0.4 383,880 - CA264_01630 0.72 -0.0 383,905 + CA264_01630 0.73 -0.1 383,942 + CA264_01630 0.75 -0.3 384,022 - CA264_01630 0.78 -0.8 384,026 + CA264_01630 0.78 -2.6 384,026 + CA264_01630 0.78 +0.2 384,026 + CA264_01630 0.78 -1.6 384,027 - CA264_01630 0.78 -0.1 384,145 + CA264_01630 0.83 -0.3 384,234 + CA264_01630 0.87 -0.5 384,234 + CA264_01630 0.87 -0.2 384,234 + CA264_01630 0.87 -0.1 384,235 - CA264_01630 0.87 +1.4 384,235 - CA264_01630 0.87 +0.6 384,235 - CA264_01630 0.87 +2.9 384,235 - CA264_01630 0.87 +1.4 384,235 - CA264_01630 0.87 -0.3 384,235 - CA264_01630 0.87 +0.0 384,301 + CA264_01630 0.90 -0.8 384,302 - CA264_01630 0.90 +0.0 384,310 + CA264_01630 0.90 +1.0 384,311 - CA264_01630 0.90 +0.2 384,314 + -1.2 384,327 - +0.2 384,328 + -0.7 384,329 - +0.8 384,356 + +0.3 384,357 - -0.0 384,420 + -0.2 384,421 - +0.2 384,433 + -0.2 384,434 - +0.0 384,434 - -1.4 384,434 - -2.1 384,520 - -1.0 384,561 + -2.8 384,561 + -1.8 384,562 - -0.5 384,562 - -0.8 384,562 - +0.5 384,563 + +0.6 384,563 + +0.7 384,563 + +0.4 384,563 + +0.2 384,564 - +0.4 384,631 - +0.4 384,645 - -0.4 384,696 - -1.1 384,714 + +0.1 384,714 + -0.8 384,784 + +0.8 384,796 + -1.1 384,815 - +0.7 384,872 - -0.9 384,872 - -0.2 384,873 + -0.0 384,873 + +0.4 384,874 - -0.0 384,907 + +0.5 384,942 - -1.4 385,000 + CA264_01635 0.17 -0.4 385,000 + CA264_01635 0.17 +0.0 385,000 + CA264_01635 0.17 +1.8 385,006 - CA264_01635 0.18 +0.4 385,006 - CA264_01635 0.18 -0.3 385,056 + CA264_01635 0.27 -0.0 385,099 + CA264_01635 0.34 +0.3 385,100 - CA264_01635 0.34 -0.2 385,161 + CA264_01635 0.44 +0.8 385,161 + CA264_01635 0.44 +0.3 385,162 - CA264_01635 0.44 +0.9 385,170 - CA264_01635 0.45 +0.7 385,301 + CA264_01635 0.67 -0.4 385,302 - CA264_01635 0.67 -0.6 385,478 + -0.4 385,479 - +0.7 385,479 - -0.7 385,479 - -0.6 385,479 - -0.7 385,479 - +0.5 385,479 - -0.2 385,484 + +1.5 385,487 + -0.4 385,493 + -0.6 385,504 + +1.0 385,504 + +0.8 385,504 + +0.1 385,504 + +0.1 385,505 - -0.9 385,505 - -0.7 385,505 - -0.0 385,508 - -0.6 385,508 - +0.6 385,514 + -0.4 385,517 + -1.2 385,517 + -0.5 385,518 - +0.2 385,518 - +0.2 385,518 - +0.2 385,524 - +1.5 385,543 + -0.1 385,543 + +0.6 385,543 + +0.0 385,545 + +0.1 385,545 + -0.9 385,546 - -0.7 385,546 - -1.0 385,546 - -0.7 385,546 - +0.7 385,546 - +0.8 385,547 + -0.9 385,548 - +0.8
Or see this region's nucleotide sequence