Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01405 and CA264_01410 are separated by 351 nucleotides CA264_01410 and CA264_01415 are separated by 88 nucleotides
CA264_01405: CA264_01405 - ATP-dependent Clp protease ATP-binding subunit ClpX, at 334,896 to 336,119
_01405
CA264_01410: CA264_01410 - ATP-dependent Clp protease proteolytic subunit, at 336,471 to 337,172
_01410
CA264_01415: CA264_01415 - trigger factor, at 337,261 to 338,583
_01415
Position (kb) 336
337
338 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 335.479 kb on - strand, within CA264_01405 at 335.586 kb on + strand, within CA264_01405 at 335.600 kb on - strand, within CA264_01405 at 335.631 kb on - strand, within CA264_01405 at 335.633 kb on - strand, within CA264_01405 at 335.646 kb on + strand, within CA264_01405 at 335.657 kb on + strand, within CA264_01405 at 335.658 kb on - strand, within CA264_01405 at 335.661 kb on + strand, within CA264_01405 at 335.662 kb on - strand, within CA264_01405 at 335.683 kb on - strand, within CA264_01405 at 335.703 kb on + strand, within CA264_01405 at 335.704 kb on - strand, within CA264_01405 at 335.704 kb on - strand, within CA264_01405 at 335.765 kb on - strand, within CA264_01405 at 335.795 kb on + strand, within CA264_01405 at 335.856 kb on - strand, within CA264_01405 at 335.857 kb on + strand, within CA264_01405 at 335.857 kb on + strand, within CA264_01405 at 335.858 kb on - strand, within CA264_01405 at 335.865 kb on - strand, within CA264_01405 at 335.866 kb on + strand, within CA264_01405 at 335.867 kb on - strand, within CA264_01405 at 336.073 kb on - strand at 336.330 kb on + strand at 336.351 kb on + strand at 336.451 kb on - strand at 336.457 kb on + strand at 336.458 kb on - strand at 336.460 kb on + strand at 336.462 kb on + strand at 336.462 kb on + strand at 336.463 kb on - strand at 336.465 kb on + strand at 336.465 kb on + strand at 336.472 kb on + strand at 336.764 kb on + strand, within CA264_01410 at 336.764 kb on + strand, within CA264_01410 at 336.807 kb on + strand, within CA264_01410 at 337.096 kb on + strand, within CA264_01410 at 337.096 kb on + strand, within CA264_01410 at 337.186 kb on - strand at 337.238 kb on + strand at 337.238 kb on + strand at 337.243 kb on + strand at 337.245 kb on + strand at 337.245 kb on + strand at 337.245 kb on + strand at 337.246 kb on - strand at 337.249 kb on + strand at 337.250 kb on - strand at 337.250 kb on - strand at 337.364 kb on + strand at 337.415 kb on + strand, within CA264_01415 at 337.578 kb on - strand, within CA264_01415 at 337.659 kb on + strand, within CA264_01415 at 337.864 kb on + strand, within CA264_01415 at 337.921 kb on + strand, within CA264_01415 at 338.007 kb on + strand, within CA264_01415 at 338.008 kb on - strand, within CA264_01415 at 338.021 kb on - strand, within CA264_01415 at 338.091 kb on + strand, within CA264_01415
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 335,479 - CA264_01405 0.48 +0.4 335,586 + CA264_01405 0.56 -0.5 335,600 - CA264_01405 0.58 -0.2 335,631 - CA264_01405 0.60 +1.0 335,633 - CA264_01405 0.60 +0.0 335,646 + CA264_01405 0.61 -2.8 335,657 + CA264_01405 0.62 -0.4 335,658 - CA264_01405 0.62 -0.3 335,661 + CA264_01405 0.62 -0.2 335,662 - CA264_01405 0.63 -0.3 335,683 - CA264_01405 0.64 -0.4 335,703 + CA264_01405 0.66 +0.0 335,704 - CA264_01405 0.66 +0.5 335,704 - CA264_01405 0.66 -0.7 335,765 - CA264_01405 0.71 -0.7 335,795 + CA264_01405 0.73 -0.6 335,856 - CA264_01405 0.78 -2.0 335,857 + CA264_01405 0.79 +0.1 335,857 + CA264_01405 0.79 +0.9 335,858 - CA264_01405 0.79 -1.5 335,865 - CA264_01405 0.79 -0.9 335,866 + CA264_01405 0.79 -1.3 335,867 - CA264_01405 0.79 -0.4 336,073 - -0.9 336,330 + -2.4 336,351 + +0.2 336,451 - +0.9 336,457 + -1.0 336,458 - -0.3 336,460 + -0.1 336,462 + -2.6 336,462 + -0.6 336,463 - -1.1 336,465 + -1.0 336,465 + -0.9 336,472 + +0.6 336,764 + CA264_01410 0.42 -1.1 336,764 + CA264_01410 0.42 -2.5 336,807 + CA264_01410 0.48 -2.4 337,096 + CA264_01410 0.89 -0.1 337,096 + CA264_01410 0.89 -0.4 337,186 - -1.2 337,238 + -0.5 337,238 + -0.4 337,243 + -2.1 337,245 + -0.0 337,245 + -0.6 337,245 + -0.4 337,246 - +0.3 337,249 + -1.1 337,250 - +0.5 337,250 - +0.1 337,364 + +1.1 337,415 + CA264_01415 0.12 -0.8 337,578 - CA264_01415 0.24 -0.6 337,659 + CA264_01415 0.30 -1.4 337,864 + CA264_01415 0.46 -0.2 337,921 + CA264_01415 0.50 -1.5 338,007 + CA264_01415 0.56 -0.9 338,008 - CA264_01415 0.56 -0.9 338,021 - CA264_01415 0.57 +0.4 338,091 + CA264_01415 0.63 -0.8
Or see this region's nucleotide sequence