Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00630 and CA264_00635 are separated by 118 nucleotides CA264_00635 and CA264_00640 are separated by 287 nucleotides
CA264_00630: CA264_00630 - cystathionine beta-lyase, at 138,752 to 139,882
_00630
CA264_00635: CA264_00635 - pyridoxal phosphate-dependent aminotransferase, at 140,001 to 141,092
_00635
CA264_00640: CA264_00640 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase, at 141,380 to 142,189
_00640
Position (kb)
140
141
142 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 139.083 kb on + strand, within CA264_00630 at 139.083 kb on + strand, within CA264_00630 at 139.109 kb on + strand, within CA264_00630 at 139.110 kb on - strand, within CA264_00630 at 139.110 kb on - strand, within CA264_00630 at 139.112 kb on - strand, within CA264_00630 at 139.112 kb on - strand, within CA264_00630 at 139.124 kb on + strand, within CA264_00630 at 139.125 kb on - strand, within CA264_00630 at 139.125 kb on - strand, within CA264_00630 at 139.125 kb on - strand, within CA264_00630 at 139.149 kb on + strand, within CA264_00630 at 139.149 kb on + strand, within CA264_00630 at 139.164 kb on + strand, within CA264_00630 at 139.231 kb on + strand, within CA264_00630 at 139.231 kb on + strand, within CA264_00630 at 139.231 kb on + strand, within CA264_00630 at 139.232 kb on - strand, within CA264_00630 at 139.401 kb on + strand, within CA264_00630 at 139.413 kb on - strand, within CA264_00630 at 139.521 kb on - strand, within CA264_00630 at 139.672 kb on + strand, within CA264_00630 at 139.690 kb on + strand, within CA264_00630 at 139.691 kb on - strand, within CA264_00630 at 139.748 kb on - strand, within CA264_00630 at 139.748 kb on - strand, within CA264_00630 at 139.828 kb on - strand at 139.878 kb on + strand at 139.880 kb on + strand at 139.926 kb on - strand at 139.942 kb on + strand at 139.961 kb on + strand at 140.002 kb on + strand at 140.129 kb on - strand, within CA264_00635 at 140.343 kb on + strand, within CA264_00635 at 140.344 kb on - strand, within CA264_00635 at 140.344 kb on - strand, within CA264_00635 at 140.420 kb on + strand, within CA264_00635 at 140.421 kb on - strand, within CA264_00635 at 140.425 kb on + strand, within CA264_00635 at 140.432 kb on - strand, within CA264_00635 at 140.455 kb on + strand, within CA264_00635 at 140.848 kb on + strand, within CA264_00635 at 140.850 kb on + strand, within CA264_00635 at 140.851 kb on - strand, within CA264_00635 at 140.871 kb on + strand, within CA264_00635 at 140.871 kb on + strand, within CA264_00635 at 140.872 kb on - strand, within CA264_00635 at 140.879 kb on + strand, within CA264_00635 at 140.879 kb on + strand, within CA264_00635 at 140.942 kb on + strand, within CA264_00635 at 141.071 kb on - strand at 141.114 kb on - strand at 141.127 kb on + strand at 141.128 kb on - strand at 141.128 kb on - strand at 141.134 kb on + strand at 141.135 kb on - strand at 141.190 kb on + strand at 141.191 kb on - strand at 141.194 kb on + strand at 141.274 kb on + strand at 141.277 kb on + strand at 141.278 kb on - strand at 141.280 kb on - strand at 141.347 kb on - strand at 141.360 kb on + strand at 141.360 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 139,083 + CA264_00630 0.29 -0.2 139,083 + CA264_00630 0.29 +0.3 139,109 + CA264_00630 0.32 -0.2 139,110 - CA264_00630 0.32 +0.9 139,110 - CA264_00630 0.32 -0.4 139,112 - CA264_00630 0.32 -0.2 139,112 - CA264_00630 0.32 -0.3 139,124 + CA264_00630 0.33 +0.2 139,125 - CA264_00630 0.33 +0.2 139,125 - CA264_00630 0.33 +2.1 139,125 - CA264_00630 0.33 -0.3 139,149 + CA264_00630 0.35 +1.0 139,149 + CA264_00630 0.35 -0.4 139,164 + CA264_00630 0.36 +0.4 139,231 + CA264_00630 0.42 +0.0 139,231 + CA264_00630 0.42 +0.7 139,231 + CA264_00630 0.42 +1.1 139,232 - CA264_00630 0.42 +0.1 139,401 + CA264_00630 0.57 -0.4 139,413 - CA264_00630 0.58 +0.1 139,521 - CA264_00630 0.68 -0.5 139,672 + CA264_00630 0.81 -0.1 139,690 + CA264_00630 0.83 +0.5 139,691 - CA264_00630 0.83 -0.3 139,748 - CA264_00630 0.88 +0.3 139,748 - CA264_00630 0.88 -0.2 139,828 - -0.9 139,878 + +0.2 139,880 + +0.0 139,926 - +0.1 139,942 + -0.1 139,961 + -2.0 140,002 + -0.5 140,129 - CA264_00635 0.12 -0.5 140,343 + CA264_00635 0.31 -0.0 140,344 - CA264_00635 0.31 +0.0 140,344 - CA264_00635 0.31 -0.6 140,420 + CA264_00635 0.38 -0.1 140,421 - CA264_00635 0.38 +0.1 140,425 + CA264_00635 0.39 +0.1 140,432 - CA264_00635 0.39 +0.1 140,455 + CA264_00635 0.42 +0.5 140,848 + CA264_00635 0.78 +0.3 140,850 + CA264_00635 0.78 +0.8 140,851 - CA264_00635 0.78 -0.0 140,871 + CA264_00635 0.80 +1.4 140,871 + CA264_00635 0.80 -0.3 140,872 - CA264_00635 0.80 +1.1 140,879 + CA264_00635 0.80 +0.4 140,879 + CA264_00635 0.80 +0.7 140,942 + CA264_00635 0.86 -0.1 141,071 - +1.3 141,114 - -0.0 141,127 + +1.5 141,128 - +0.3 141,128 - +0.9 141,134 + +0.3 141,135 - -0.1 141,190 + -0.1 141,191 - -0.6 141,194 + +1.7 141,274 + -0.0 141,277 + +0.6 141,278 - -1.5 141,280 - +0.4 141,347 - +0.4 141,360 + +0.5 141,360 + +1.9
Or see this region's nucleotide sequence