Experiment: m.b. Chlorite 0.15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2892 and Echvi_2893 are separated by 137 nucleotides Echvi_2893 and Echvi_2894 are separated by 13 nucleotides Echvi_2894 and Echvi_2895 are separated by 3 nucleotides
Echvi_2892: Echvi_2892 - Protein of unknown function, DUF481., at 3,462,391 to 3,463,608
_2892
Echvi_2893: Echvi_2893 - hypothetical protein, at 3,463,746 to 3,464,108
_2893
Echvi_2894: Echvi_2894 - YceI-like domain., at 3,464,122 to 3,464,661
_2894
Echvi_2895: Echvi_2895 - hypothetical protein, at 3,464,665 to 3,465,567
_2895
Position (kb)
3464
3465 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3463.138 kb on - strand, within Echvi_2892 at 3463.172 kb on + strand, within Echvi_2892 at 3463.225 kb on + strand, within Echvi_2892 at 3463.225 kb on + strand, within Echvi_2892 at 3463.226 kb on - strand, within Echvi_2892 at 3463.248 kb on - strand, within Echvi_2892 at 3463.291 kb on + strand, within Echvi_2892 at 3463.324 kb on + strand, within Echvi_2892 at 3463.325 kb on - strand, within Echvi_2892 at 3463.325 kb on - strand, within Echvi_2892 at 3463.348 kb on + strand, within Echvi_2892 at 3463.348 kb on + strand, within Echvi_2892 at 3463.348 kb on + strand, within Echvi_2892 at 3463.349 kb on - strand, within Echvi_2892 at 3463.349 kb on - strand, within Echvi_2892 at 3463.350 kb on + strand, within Echvi_2892 at 3463.350 kb on + strand, within Echvi_2892 at 3463.351 kb on - strand, within Echvi_2892 at 3463.457 kb on + strand, within Echvi_2892 at 3463.511 kb on + strand at 3463.512 kb on - strand at 3463.522 kb on + strand at 3463.524 kb on + strand at 3463.525 kb on - strand at 3463.525 kb on - strand at 3463.529 kb on + strand at 3463.529 kb on + strand at 3463.597 kb on + strand at 3463.599 kb on + strand at 3463.600 kb on - strand at 3463.645 kb on + strand at 3463.651 kb on - strand at 3463.651 kb on - strand at 3463.703 kb on + strand at 3463.703 kb on + strand at 3463.712 kb on - strand at 3463.740 kb on + strand at 3463.862 kb on + strand, within Echvi_2893 at 3463.869 kb on - strand, within Echvi_2893 at 3463.885 kb on + strand, within Echvi_2893 at 3463.885 kb on + strand, within Echvi_2893 at 3463.886 kb on - strand, within Echvi_2893 at 3463.898 kb on + strand, within Echvi_2893 at 3463.904 kb on + strand, within Echvi_2893 at 3463.905 kb on - strand, within Echvi_2893 at 3463.955 kb on + strand, within Echvi_2893 at 3464.165 kb on + strand at 3464.165 kb on + strand at 3464.166 kb on - strand at 3464.205 kb on + strand, within Echvi_2894 at 3464.266 kb on - strand, within Echvi_2894 at 3464.267 kb on + strand, within Echvi_2894 at 3464.267 kb on + strand, within Echvi_2894 at 3464.268 kb on - strand, within Echvi_2894 at 3464.268 kb on - strand, within Echvi_2894 at 3464.268 kb on - strand, within Echvi_2894 at 3464.268 kb on - strand, within Echvi_2894 at 3464.268 kb on - strand, within Echvi_2894 at 3464.287 kb on - strand, within Echvi_2894 at 3464.582 kb on + strand, within Echvi_2894 at 3464.650 kb on - strand at 3464.659 kb on + strand at 3464.835 kb on - strand, within Echvi_2895 at 3464.865 kb on + strand, within Echvi_2895 at 3464.872 kb on - strand, within Echvi_2895 at 3464.905 kb on + strand, within Echvi_2895 at 3464.905 kb on + strand, within Echvi_2895 at 3464.953 kb on + strand, within Echvi_2895 at 3465.009 kb on - strand, within Echvi_2895 at 3465.010 kb on + strand, within Echvi_2895 at 3465.011 kb on - strand, within Echvi_2895 at 3465.031 kb on - strand, within Echvi_2895 at 3465.086 kb on - strand, within Echvi_2895 at 3465.105 kb on + strand, within Echvi_2895 at 3465.105 kb on + strand, within Echvi_2895 at 3465.125 kb on + strand, within Echvi_2895 at 3465.126 kb on - strand, within Echvi_2895 at 3465.150 kb on - strand, within Echvi_2895 at 3465.150 kb on - strand, within Echvi_2895 at 3465.155 kb on - strand, within Echvi_2895 at 3465.170 kb on + strand, within Echvi_2895 at 3465.171 kb on - strand, within Echvi_2895 at 3465.204 kb on - strand, within Echvi_2895 at 3465.204 kb on - strand, within Echvi_2895 at 3465.204 kb on - strand, within Echvi_2895 at 3465.221 kb on - strand, within Echvi_2895 at 3465.331 kb on + strand, within Echvi_2895 at 3465.332 kb on - strand, within Echvi_2895 at 3465.349 kb on + strand, within Echvi_2895 at 3465.369 kb on + strand, within Echvi_2895 at 3465.370 kb on - strand, within Echvi_2895 at 3465.462 kb on + strand, within Echvi_2895 at 3465.462 kb on + strand, within Echvi_2895 at 3465.566 kb on - strand at 3465.572 kb on + strand at 3465.575 kb on + strand at 3465.620 kb on - strand at 3465.626 kb on + strand at 3465.640 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.15 mM remove 3,463,138 - Echvi_2892 0.61 -0.7 3,463,172 + Echvi_2892 0.64 -0.2 3,463,225 + Echvi_2892 0.68 -2.1 3,463,225 + Echvi_2892 0.68 -2.0 3,463,226 - Echvi_2892 0.69 +0.8 3,463,248 - Echvi_2892 0.70 -0.9 3,463,291 + Echvi_2892 0.74 +1.0 3,463,324 + Echvi_2892 0.77 -1.2 3,463,325 - Echvi_2892 0.77 +0.0 3,463,325 - Echvi_2892 0.77 +1.2 3,463,348 + Echvi_2892 0.79 -1.2 3,463,348 + Echvi_2892 0.79 +1.0 3,463,348 + Echvi_2892 0.79 +0.8 3,463,349 - Echvi_2892 0.79 -1.6 3,463,349 - Echvi_2892 0.79 -0.9 3,463,350 + Echvi_2892 0.79 +0.4 3,463,350 + Echvi_2892 0.79 +1.3 3,463,351 - Echvi_2892 0.79 -1.2 3,463,457 + Echvi_2892 0.88 -0.9 3,463,511 + +0.2 3,463,512 - +1.0 3,463,522 + -0.5 3,463,524 + +1.6 3,463,525 - -0.7 3,463,525 - +0.0 3,463,529 + -0.2 3,463,529 + +0.0 3,463,597 + +1.0 3,463,599 + +0.2 3,463,600 - -1.6 3,463,645 + +0.1 3,463,651 - -0.5 3,463,651 - +0.3 3,463,703 + -0.3 3,463,703 + -1.1 3,463,712 - -1.9 3,463,740 + -3.2 3,463,862 + Echvi_2893 0.32 +0.5 3,463,869 - Echvi_2893 0.34 +0.2 3,463,885 + Echvi_2893 0.38 -1.8 3,463,885 + Echvi_2893 0.38 -0.5 3,463,886 - Echvi_2893 0.39 -0.0 3,463,898 + Echvi_2893 0.42 -1.5 3,463,904 + Echvi_2893 0.44 -1.4 3,463,905 - Echvi_2893 0.44 -0.0 3,463,955 + Echvi_2893 0.58 -0.9 3,464,165 + +0.5 3,464,165 + -0.2 3,464,166 - -0.9 3,464,205 + Echvi_2894 0.15 +0.8 3,464,266 - Echvi_2894 0.27 +1.9 3,464,267 + Echvi_2894 0.27 +1.7 3,464,267 + Echvi_2894 0.27 +1.2 3,464,268 - Echvi_2894 0.27 +0.7 3,464,268 - Echvi_2894 0.27 -0.7 3,464,268 - Echvi_2894 0.27 -1.0 3,464,268 - Echvi_2894 0.27 +1.2 3,464,268 - Echvi_2894 0.27 +0.4 3,464,287 - Echvi_2894 0.31 -1.1 3,464,582 + Echvi_2894 0.85 -0.1 3,464,650 - +0.3 3,464,659 + -0.1 3,464,835 - Echvi_2895 0.19 -0.2 3,464,865 + Echvi_2895 0.22 +0.2 3,464,872 - Echvi_2895 0.23 -0.6 3,464,905 + Echvi_2895 0.27 -0.7 3,464,905 + Echvi_2895 0.27 -0.0 3,464,953 + Echvi_2895 0.32 -0.9 3,465,009 - Echvi_2895 0.38 +0.9 3,465,010 + Echvi_2895 0.38 +0.5 3,465,011 - Echvi_2895 0.38 +1.4 3,465,031 - Echvi_2895 0.41 +0.2 3,465,086 - Echvi_2895 0.47 -1.2 3,465,105 + Echvi_2895 0.49 -0.6 3,465,105 + Echvi_2895 0.49 +0.2 3,465,125 + Echvi_2895 0.51 +0.5 3,465,126 - Echvi_2895 0.51 +1.6 3,465,150 - Echvi_2895 0.54 -0.5 3,465,150 - Echvi_2895 0.54 -0.3 3,465,155 - Echvi_2895 0.54 -1.2 3,465,170 + Echvi_2895 0.56 +0.2 3,465,171 - Echvi_2895 0.56 -0.7 3,465,204 - Echvi_2895 0.60 -1.0 3,465,204 - Echvi_2895 0.60 -0.5 3,465,204 - Echvi_2895 0.60 -0.1 3,465,221 - Echvi_2895 0.62 +0.0 3,465,331 + Echvi_2895 0.74 +0.8 3,465,332 - Echvi_2895 0.74 +0.0 3,465,349 + Echvi_2895 0.76 +0.5 3,465,369 + Echvi_2895 0.78 +0.2 3,465,370 - Echvi_2895 0.78 -0.3 3,465,462 + Echvi_2895 0.88 +0.4 3,465,462 + Echvi_2895 0.88 +0.8 3,465,566 - +1.1 3,465,572 + +0.9 3,465,575 + +0.0 3,465,620 - -0.9 3,465,626 + +0.5 3,465,640 + -1.6
Or see this region's nucleotide sequence