Experiment: m.b. Chlorite 0.15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1658 and Echvi_1659 are separated by 61 nucleotides Echvi_1659 and Echvi_1660 overlap by 4 nucleotides Echvi_1660 and Echvi_1661 are separated by 151 nucleotides
Echvi_1658: Echvi_1658 - hypothetical protein, at 1,927,354 to 1,928,652
_1658
Echvi_1659: Echvi_1659 - Farnesoic acid 0-methyl transferase., at 1,928,714 to 1,929,430
_1659
Echvi_1660: Echvi_1660 - hypothetical protein, at 1,929,427 to 1,929,516
_1660
Echvi_1661: Echvi_1661 - hypothetical protein, at 1,929,668 to 1,932,388
_1661
Position (kb)
1928
1929
1930 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1927.720 kb on - strand, within Echvi_1658 at 1927.764 kb on + strand, within Echvi_1658 at 1927.764 kb on + strand, within Echvi_1658 at 1927.810 kb on + strand, within Echvi_1658 at 1927.848 kb on - strand, within Echvi_1658 at 1927.928 kb on + strand, within Echvi_1658 at 1927.928 kb on + strand, within Echvi_1658 at 1927.995 kb on - strand, within Echvi_1658 at 1927.995 kb on - strand, within Echvi_1658 at 1928.092 kb on - strand, within Echvi_1658 at 1928.108 kb on + strand, within Echvi_1658 at 1928.153 kb on - strand, within Echvi_1658 at 1928.158 kb on + strand, within Echvi_1658 at 1928.158 kb on + strand, within Echvi_1658 at 1928.188 kb on + strand, within Echvi_1658 at 1928.188 kb on + strand, within Echvi_1658 at 1928.188 kb on + strand, within Echvi_1658 at 1928.189 kb on - strand, within Echvi_1658 at 1928.189 kb on - strand, within Echvi_1658 at 1928.227 kb on + strand, within Echvi_1658 at 1928.227 kb on + strand, within Echvi_1658 at 1928.227 kb on + strand, within Echvi_1658 at 1928.227 kb on + strand, within Echvi_1658 at 1928.227 kb on + strand, within Echvi_1658 at 1928.227 kb on + strand, within Echvi_1658 at 1928.227 kb on + strand, within Echvi_1658 at 1928.227 kb on + strand, within Echvi_1658 at 1928.227 kb on + strand, within Echvi_1658 at 1928.227 kb on + strand, within Echvi_1658 at 1928.227 kb on + strand, within Echvi_1658 at 1928.228 kb on - strand, within Echvi_1658 at 1928.228 kb on - strand, within Echvi_1658 at 1928.228 kb on - strand, within Echvi_1658 at 1928.228 kb on - strand, within Echvi_1658 at 1928.228 kb on - strand, within Echvi_1658 at 1928.228 kb on - strand, within Echvi_1658 at 1928.228 kb on - strand, within Echvi_1658 at 1928.228 kb on - strand, within Echvi_1658 at 1928.228 kb on - strand, within Echvi_1658 at 1928.228 kb on - strand, within Echvi_1658 at 1928.228 kb on - strand, within Echvi_1658 at 1928.228 kb on - strand, within Echvi_1658 at 1928.233 kb on + strand, within Echvi_1658 at 1928.235 kb on + strand, within Echvi_1658 at 1928.253 kb on - strand, within Echvi_1658 at 1928.328 kb on - strand, within Echvi_1658 at 1928.328 kb on - strand, within Echvi_1658 at 1928.328 kb on - strand, within Echvi_1658 at 1928.328 kb on - strand, within Echvi_1658 at 1928.351 kb on + strand, within Echvi_1658 at 1928.352 kb on - strand, within Echvi_1658 at 1928.378 kb on - strand, within Echvi_1658 at 1928.426 kb on + strand, within Echvi_1658 at 1928.428 kb on + strand, within Echvi_1658 at 1928.429 kb on - strand, within Echvi_1658 at 1928.429 kb on - strand, within Echvi_1658 at 1928.429 kb on - strand, within Echvi_1658 at 1928.439 kb on + strand, within Echvi_1658 at 1928.589 kb on + strand at 1928.659 kb on - strand at 1928.710 kb on + strand at 1928.710 kb on + strand at 1928.711 kb on - strand at 1928.711 kb on - strand at 1928.713 kb on - strand at 1928.713 kb on - strand at 1928.713 kb on - strand at 1928.725 kb on - strand at 1928.734 kb on - strand at 1928.816 kb on - strand, within Echvi_1659 at 1928.908 kb on - strand, within Echvi_1659 at 1928.981 kb on - strand, within Echvi_1659 at 1928.993 kb on + strand, within Echvi_1659 at 1929.116 kb on + strand, within Echvi_1659 at 1929.117 kb on - strand, within Echvi_1659 at 1929.117 kb on - strand, within Echvi_1659 at 1929.117 kb on - strand, within Echvi_1659 at 1929.134 kb on + strand, within Echvi_1659 at 1929.134 kb on + strand, within Echvi_1659 at 1929.135 kb on - strand, within Echvi_1659 at 1929.135 kb on - strand, within Echvi_1659 at 1929.135 kb on - strand, within Echvi_1659 at 1929.137 kb on + strand, within Echvi_1659 at 1929.137 kb on + strand, within Echvi_1659 at 1929.137 kb on + strand, within Echvi_1659 at 1929.137 kb on + strand, within Echvi_1659 at 1929.137 kb on + strand, within Echvi_1659 at 1929.137 kb on + strand, within Echvi_1659 at 1929.137 kb on + strand at 1929.137 kb on + strand, within Echvi_1659 at 1929.138 kb on - strand, within Echvi_1659 at 1929.138 kb on - strand, within Echvi_1659 at 1929.138 kb on - strand, within Echvi_1659 at 1929.138 kb on - strand, within Echvi_1659 at 1929.159 kb on - strand, within Echvi_1659 at 1929.159 kb on - strand, within Echvi_1659 at 1929.159 kb on - strand, within Echvi_1659 at 1929.186 kb on - strand, within Echvi_1659 at 1929.201 kb on + strand, within Echvi_1659 at 1929.201 kb on + strand, within Echvi_1659 at 1929.260 kb on + strand, within Echvi_1659 at 1929.260 kb on + strand, within Echvi_1659 at 1929.261 kb on - strand, within Echvi_1659 at 1929.261 kb on - strand, within Echvi_1659 at 1929.261 kb on - strand, within Echvi_1659 at 1929.268 kb on + strand, within Echvi_1659 at 1929.329 kb on + strand, within Echvi_1659 at 1929.329 kb on + strand, within Echvi_1659 at 1929.359 kb on + strand at 1929.416 kb on - strand at 1929.416 kb on - strand at 1929.416 kb on - strand at 1929.427 kb on - strand at 1929.427 kb on - strand at 1929.470 kb on + strand, within Echvi_1660 at 1929.470 kb on + strand, within Echvi_1660 at 1929.514 kb on + strand at 1929.614 kb on + strand at 1929.657 kb on - strand at 1929.657 kb on - strand at 1929.657 kb on - strand at 1929.734 kb on + strand at 1929.734 kb on + strand at 1929.734 kb on + strand at 1929.734 kb on + strand at 1929.735 kb on - strand at 1929.735 kb on - strand at 1929.735 kb on - strand at 1929.735 kb on - strand at 1929.735 kb on - strand at 1929.737 kb on - strand at 1929.737 kb on - strand at 1929.802 kb on + strand at 1929.802 kb on + strand at 1929.803 kb on - strand at 1929.849 kb on + strand at 1929.849 kb on + strand at 1929.850 kb on - strand at 1929.948 kb on - strand, within Echvi_1661 at 1930.065 kb on + strand, within Echvi_1661 at 1930.087 kb on - strand, within Echvi_1661 at 1930.096 kb on + strand, within Echvi_1661 at 1930.097 kb on - strand, within Echvi_1661 at 1930.219 kb on - strand, within Echvi_1661 at 1930.315 kb on - strand, within Echvi_1661 at 1930.330 kb on + strand, within Echvi_1661 at 1930.330 kb on + strand, within Echvi_1661 at 1930.330 kb on + strand, within Echvi_1661 at 1930.330 kb on + strand, within Echvi_1661 at 1930.331 kb on - strand, within Echvi_1661 at 1930.331 kb on - strand, within Echvi_1661 at 1930.331 kb on - strand, within Echvi_1661 at 1930.331 kb on - strand, within Echvi_1661 at 1930.331 kb on - strand, within Echvi_1661 at 1930.412 kb on - strand, within Echvi_1661 at 1930.417 kb on + strand, within Echvi_1661 at 1930.417 kb on + strand, within Echvi_1661 at 1930.418 kb on - strand, within Echvi_1661 at 1930.418 kb on - strand, within Echvi_1661 at 1930.421 kb on + strand, within Echvi_1661 at 1930.421 kb on + strand, within Echvi_1661 at 1930.422 kb on - strand, within Echvi_1661
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.15 mM remove 1,927,720 - Echvi_1658 0.28 -0.6 1,927,764 + Echvi_1658 0.32 -0.5 1,927,764 + Echvi_1658 0.32 -0.0 1,927,810 + Echvi_1658 0.35 -1.6 1,927,848 - Echvi_1658 0.38 -2.3 1,927,928 + Echvi_1658 0.44 +0.0 1,927,928 + Echvi_1658 0.44 +0.3 1,927,995 - Echvi_1658 0.49 +1.0 1,927,995 - Echvi_1658 0.49 +1.9 1,928,092 - Echvi_1658 0.57 +0.1 1,928,108 + Echvi_1658 0.58 -0.1 1,928,153 - Echvi_1658 0.62 +1.1 1,928,158 + Echvi_1658 0.62 -0.5 1,928,158 + Echvi_1658 0.62 -0.8 1,928,188 + Echvi_1658 0.64 +0.3 1,928,188 + Echvi_1658 0.64 +0.2 1,928,188 + Echvi_1658 0.64 +0.8 1,928,189 - Echvi_1658 0.64 +0.8 1,928,189 - Echvi_1658 0.64 -0.3 1,928,227 + Echvi_1658 0.67 +3.5 1,928,227 + Echvi_1658 0.67 +1.0 1,928,227 + Echvi_1658 0.67 +1.3 1,928,227 + Echvi_1658 0.67 +0.0 1,928,227 + Echvi_1658 0.67 -1.1 1,928,227 + Echvi_1658 0.67 -1.9 1,928,227 + Echvi_1658 0.67 +0.5 1,928,227 + Echvi_1658 0.67 -0.3 1,928,227 + Echvi_1658 0.67 +0.3 1,928,227 + Echvi_1658 0.67 -1.0 1,928,227 + Echvi_1658 0.67 -0.5 1,928,228 - Echvi_1658 0.67 -0.5 1,928,228 - Echvi_1658 0.67 -0.8 1,928,228 - Echvi_1658 0.67 -0.1 1,928,228 - Echvi_1658 0.67 -0.0 1,928,228 - Echvi_1658 0.67 +0.0 1,928,228 - Echvi_1658 0.67 +0.1 1,928,228 - Echvi_1658 0.67 -1.3 1,928,228 - Echvi_1658 0.67 -0.4 1,928,228 - Echvi_1658 0.67 +0.1 1,928,228 - Echvi_1658 0.67 -0.2 1,928,228 - Echvi_1658 0.67 -1.4 1,928,228 - Echvi_1658 0.67 -0.1 1,928,233 + Echvi_1658 0.68 -1.9 1,928,235 + Echvi_1658 0.68 -1.1 1,928,253 - Echvi_1658 0.69 +0.3 1,928,328 - Echvi_1658 0.75 +0.7 1,928,328 - Echvi_1658 0.75 -0.4 1,928,328 - Echvi_1658 0.75 -1.3 1,928,328 - Echvi_1658 0.75 -0.7 1,928,351 + Echvi_1658 0.77 -0.2 1,928,352 - Echvi_1658 0.77 +0.8 1,928,378 - Echvi_1658 0.79 +0.0 1,928,426 + Echvi_1658 0.83 -1.9 1,928,428 + Echvi_1658 0.83 -2.3 1,928,429 - Echvi_1658 0.83 +0.8 1,928,429 - Echvi_1658 0.83 -1.5 1,928,429 - Echvi_1658 0.83 +0.9 1,928,439 + Echvi_1658 0.84 -1.7 1,928,589 + -0.2 1,928,659 - +1.0 1,928,710 + +1.4 1,928,710 + +0.5 1,928,711 - -0.8 1,928,711 - -0.3 1,928,713 - -1.3 1,928,713 - -1.3 1,928,713 - -0.5 1,928,725 - -2.2 1,928,734 - +0.4 1,928,816 - Echvi_1659 0.14 -2.4 1,928,908 - Echvi_1659 0.27 +0.2 1,928,981 - Echvi_1659 0.37 -0.2 1,928,993 + Echvi_1659 0.39 -0.9 1,929,116 + Echvi_1659 0.56 -0.6 1,929,117 - Echvi_1659 0.56 -0.2 1,929,117 - Echvi_1659 0.56 -0.5 1,929,117 - Echvi_1659 0.56 +0.1 1,929,134 + Echvi_1659 0.59 -0.7 1,929,134 + Echvi_1659 0.59 +0.4 1,929,135 - Echvi_1659 0.59 +0.1 1,929,135 - Echvi_1659 0.59 +0.1 1,929,135 - Echvi_1659 0.59 +0.4 1,929,137 + Echvi_1659 0.59 -0.9 1,929,137 + Echvi_1659 0.59 +0.3 1,929,137 + Echvi_1659 0.59 -0.1 1,929,137 + Echvi_1659 0.59 +0.6 1,929,137 + Echvi_1659 0.59 -1.4 1,929,137 + Echvi_1659 0.59 -0.7 1,929,137 + +0.9 1,929,137 + Echvi_1659 0.59 -2.4 1,929,138 - Echvi_1659 0.59 -1.7 1,929,138 - Echvi_1659 0.59 +0.5 1,929,138 - Echvi_1659 0.59 -1.2 1,929,138 - Echvi_1659 0.59 -0.3 1,929,159 - Echvi_1659 0.62 +1.2 1,929,159 - Echvi_1659 0.62 -1.9 1,929,159 - Echvi_1659 0.62 +0.4 1,929,186 - Echvi_1659 0.66 +0.1 1,929,201 + Echvi_1659 0.68 -1.1 1,929,201 + Echvi_1659 0.68 -0.4 1,929,260 + Echvi_1659 0.76 -0.8 1,929,260 + Echvi_1659 0.76 -1.8 1,929,261 - Echvi_1659 0.76 -0.7 1,929,261 - Echvi_1659 0.76 +0.7 1,929,261 - Echvi_1659 0.76 -1.2 1,929,268 + Echvi_1659 0.77 -1.2 1,929,329 + Echvi_1659 0.86 +0.4 1,929,329 + Echvi_1659 0.86 +0.5 1,929,359 + +0.8 1,929,416 - +0.5 1,929,416 - +0.1 1,929,416 - -0.8 1,929,427 - -0.0 1,929,427 - +1.2 1,929,470 + Echvi_1660 0.48 +2.0 1,929,470 + Echvi_1660 0.48 +1.3 1,929,514 + +0.7 1,929,614 + -0.3 1,929,657 - -0.1 1,929,657 - -1.6 1,929,657 - +0.3 1,929,734 + +0.7 1,929,734 + +0.7 1,929,734 + -0.2 1,929,734 + -0.4 1,929,735 - -1.1 1,929,735 - -1.3 1,929,735 - +2.6 1,929,735 - +1.1 1,929,735 - +0.9 1,929,737 - +0.4 1,929,737 - +0.7 1,929,802 + -0.3 1,929,802 + -0.8 1,929,803 - -1.0 1,929,849 + -0.9 1,929,849 + +0.9 1,929,850 - -0.3 1,929,948 - Echvi_1661 0.10 -0.1 1,930,065 + Echvi_1661 0.15 -0.4 1,930,087 - Echvi_1661 0.15 +0.6 1,930,096 + Echvi_1661 0.16 +0.9 1,930,097 - Echvi_1661 0.16 +0.3 1,930,219 - Echvi_1661 0.20 +0.0 1,930,315 - Echvi_1661 0.24 +0.8 1,930,330 + Echvi_1661 0.24 -1.0 1,930,330 + Echvi_1661 0.24 +0.7 1,930,330 + Echvi_1661 0.24 -2.9 1,930,330 + Echvi_1661 0.24 -2.2 1,930,331 - Echvi_1661 0.24 +1.7 1,930,331 - Echvi_1661 0.24 +0.7 1,930,331 - Echvi_1661 0.24 +1.8 1,930,331 - Echvi_1661 0.24 +1.8 1,930,331 - Echvi_1661 0.24 -2.1 1,930,412 - Echvi_1661 0.27 +0.8 1,930,417 + Echvi_1661 0.28 +1.2 1,930,417 + Echvi_1661 0.28 -1.3 1,930,418 - Echvi_1661 0.28 -0.5 1,930,418 - Echvi_1661 0.28 -1.0 1,930,421 + Echvi_1661 0.28 -0.9 1,930,421 + Echvi_1661 0.28 +0.5 1,930,422 - Echvi_1661 0.28 -2.9
Or see this region's nucleotide sequence